Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443789
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Entry
135443789 CDS
T09958
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zle04990
]
135443789 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
zle04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
135443789 (SNX13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
BLOC1_2
DUF6395
Motif
Other DBs
NCBI-GeneID:
135443789
NCBI-ProteinID:
XP_064560497
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All DBs
Position
2:complement(30899199..30964512)
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AA seq
968 aa
AA seq
DB search
MLTETSLSIWGWGSLGLVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIA
EKGNQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
SSINLSLDDLSNVPTDETVQLHAYISDTVYADSDPYAVAGVCNDHGKTYALYAITVHRRN
ANNEEMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
IPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCRVAAPIDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRK
GILRVFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFHKLHSRSKQMQRYKQRLHST
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagagaccagtctttccatatggggatggggaagtcttggccttgtgcttttt
ctagtaacttttggacccttcgctatattttactttgcattttatatcctctgctttgtg
ggtgggggttttgtggttactcttttatttggaaaaagcaattcagaaaaataccttgag
cagtgtgaacattcatttctcccttgtacatcggttggaatccctaagtgcatagaagaa
atgaaacgtgaagccagacctattaagattgacagaagactgacaggtgcaaatataatt
gatgagcctttacaacaggtaatccagttttccctgagagactatgtgcagtattggtat
tacacactaagtgatgatgaatcctttcttctggaaattaggcaggctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttatttcactacacga
cttgttgatgactttggcactcatcttcgagttttcagaaaagctcagcaaaggatagca
gagaaaggcaatcagatgaaagatcaagctgaggaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgatctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagac
ttccagaataagatcatgcgatactttgtcagggaaatcctctctcgaggaattcttctt
ccattaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggcgagttggaagctgtgaaagataaagcaagtgaagaattgcaatatcttcgatctcta
gatacagcaggagatgatatcaacactataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccacattctggtagac
aatgttgcactacagttttttatggattacatgcagcaaactggtggccaagcacatctg
tttttctggatgacagtggaaggatacagggttacagcacagcagcaactggaggtactt
caaagtcggcagaaagatggaaagcatcagactaatcagaccaagggtctattaagagca
gctgcatttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatatt
gatgacaacttagtagcaaaacttgcagaaacactgaaccatgaggatccaacacccgaa
atctttgatgacattcagagaaaggtgtatgagttgatgctgcgagatgagaggttctac
ccttcgttcaagcagaacgtgttgtatgtgcgtatgttagctgagctggacatgctgaag
gatcccagtttcagaggatcagatgatggtgaaggagaatcttttaatgggtctcctact
agcagcataaatctgtccttagatgacctttcaaatgtccccactgatgagactgttcag
ctccatgcatacatctcagatactgtctatgctgactctgacccatatgctgtggcagga
gtgtgcaatgaccacggcaagacgtacgccctgtacgccatcaccgtccaccggcgaaac
gcaaacaacgaggagatgtggaagacgtaccggcgctacagtgacttccacgacttccac
atgaggatcactgagcagtttgaaaaccttgcaaatatactaaaacttcctggcaaaaaa
acatttaacaatatggacagagagtttttggaaaagaggaaaaaagacttaaatgcttat
ttgcagctcttgttaaatcctgaaatgatgaaagcttctccagctttagcccattatgtg
tatgacttcctggagaataaagcctacagcaaagggaagggagattttgcacggaagatg
gatacgtttgtaaatccactgcgtaactctatgagaaacgtatcaaatgcagtcaagtct
atccctgacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagattgggacaagacataaagcaatcatttttcaaggtgccacctctgatgcagaaa
acctattcagatcctgaccattgccgtgttgcagcaccaattgatgacaacgtggatgac
aatattccgctgagagtaatgcttctgcttatggatgaagtctttgatttaaaggagaga
aatcagtggttaagaagaaatataaaaaatctgcttcagcaacttattagagcaacatat
ggtgacacaattaatagaaaaatagttgatcatgttgattggatgacatctcctgagcaa
gtagcagatgcagtaaaacgcttcagagacgctttttggcccaacggcattttagcagaa
actgttccacgaagggacaaagctattagaatgagaacaagagtggcagggaaaaccaaa
ttgctggaggtaatgccagatgaactgaagcacatcataggcgctgagactacacggaaa
ggcattcttcgggtcttcgaaatgttccagcatagccagctgaataagagaatggtgtat
gtgtttctggagagattcctagaaaccttatttccacaaaataagttccctgagctgttc
cacaaactgcattcaaggtcaaagcaaatgcagagatataagcagagactacactctact
caagcgccttctttacagaaaaggtga
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