Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443790
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Entry
135443790 CDS
T09958
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135443790 (HDAC9)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
135443790 (HDAC9)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
135443790 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
135443790
NCBI-ProteinID:
XP_064560499
LinkDB
All DBs
Position
2:31011001..31466649
Genome browser
AA seq
1087 aa
AA seq
DB search
MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMVPMVDPIMREKQLQQELLLIQQQQQIQ
KQLLIAEFQKQHENLTRQHQAQLQEHIKLQQELLAIKQQQELLEKEQKLEQQRQEQELER
HRREQQLPPLRGKERGRERAVASTEVKQKLQEFLLSKSATKDSPANGKNHSMSRHPKLWY
TAAHHTSLDQSSPPLSGASPPYKYTLPGAQDAKDDFPLRKTASEPNLKVRSRLKQKVTER
RSSPLLRRKDGNVSSFKKRLFEVTESSVSSSSPGSGPSSPSNGPTSSATENETSVLPSNI
QAEHLVSQQRLLIQDESVNLLSLYTSPSLPNITLGLPAIQPQISGVRECSRKSNSFPLLQ
ASSSFKEKQKGETPPLRQGVALAGQYGGNIPPSSTHPHIAMEGKPNSSHQALLQHLLLKE
QMRQQKLLVTGAVPLHPQSPLAAKERVSPGIRAAHKLPRHRPLNRTQSAPLPQSTLAQLV
IQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQLKQPGSHLEEAEEELHGDHSMQEERAPAS
SASVRAESSSAGVDDTIGQQVGAVKVKEEPLDSDEDVQTQQMESGEQAAFMQQEFLAHQH
VHQLQIYQAQMATVGMAGSDKHRPLSRTPSSPTDSTLPHPDMDQPSQHVYTTGVVYDSLM
LKHQCMCGNYANHPEHAGRIQSIWSRLQETGLLNKCERIRGRKASLEEIQLVHSEHHSLL
YGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGGLGVDSDTVWNELHSAGAARMAVGCVIEL
AARVASRELKNGFAVVRPPGHHAEESTAMGFCFFNSIAITAKYLRDKLNIGKILIVDLDV
HHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGYNINIAWTGGLDPP
MGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAKCFGHLTKQLL
KLADGRVVLALEGGHDLTAICDASEACINALLGNELEPLPEDIVHQIPNMNAIASLKKTT
EIQSKYWKSVEPYSVPVDCALAESQKQEREETETVSAMASLSVDVEQCVPQEGSRAAGEP
MEEEPAL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtatgatcagctcagtggatgtgaagtcggaggttccagtggggctggagccg
atctccccgttagacctgcggacggatctcaggatgatggttcccatggtggaccccatt
atgcgcgaaaagcagctacagcaggagctgctcctgatccagcagcagcagcagattcag
aaacagctgctcattgcagagttccagaagcagcatgaaaacctgacccgccagcatcag
gcccagctccaggagcacattaagttacaacaggaactactagccattaaacaacagcaa
gaactccttgaaaaagagcagaaactggagcagcagagacaagagcaggaactggagagg
catcgcagggagcaacagcttcctcccctccgaggcaaagaaagaggacgagaaagggca
gtggccagtacagaagtgaagcagaaacttcaggagttcctgttaagtaaatcagctaca
aaagactctccagcaaatgggaagaatcattccatgagccgtcaccccaagctctggtac
acggctgcccaccatacctcactggatcaaagctctccacccctgagcggggcctcgcca
ccatacaaatatactttaccaggagcacaggatgcgaaggatgattttccacttcgtaaa
acggcttcagagcccaacttgaaggtacgttcaagattaaaacaaaaggtgacagaaagg
agaagcagtcctttgctcaggaggaaggatggaaatgtcagttcattcaagaagcgtctt
ttcgaggtgacagaatcctcagtcagtagcagctcccctggatcaggtcccagttcccca
agcaatggtccgaccagcagtgcaacagaaaatgaaacctcagttttgccatctaacatt
caagctgagcacctggtttcccagcaacgccttttgatacaggatgaatcagtgaacttg
ttgagtctgtacacgtccccttctctgcccaacattaccttgggacttccagcaatacaa
cctcaaatcagtggagtcagggagtgctccaggaaaagtaatagcttcccacttctacag
gcttcgtcatcattcaaagaaaagcagaagggggagaccccgccacttagacaaggagtg
gccttggctggacagtatggaggaaacattcctccatcatcaactcatcctcacatcgct
atggagggaaagccaaacagcagccaccaagctctcttgcagcatctgttactgaaagaa
caaatgagacagcaaaaacttcttgtgaccggagcggttcctcttcatccacagtctcct
ctagcagcaaaggagagagtctcacctggcataagagctgctcacaaactgcctcgtcac
aggccactgaacagaacgcagtctgctcctcttcctcagagtactttggcccagctggtc
atccagcagcaacatcagcaatttttggaaaagcagaaacagtaccagcagcagatccac
atgaataagatgctctctaagtccattgagcagctgaagcagcctggcagtcacctggag
gaagctgaagaagagctccatggagatcactcgatgcaggaagagcgagctcccgccagc
agcgccagcgttagggctgagagcagcagtgctggtgtggatgacacaataggacagcag
gtgggggctgtgaaagtcaaagaggagccactggacagtgatgaggatgttcaaacccag
caaatggaatctggggagcaagctgcttttatgcaacaggagttcctggcacatcagcat
gtccaccagttgcaaatctaccaggctcagatggctacagttggcatggcaggatcagat
aaacatcgaccactttccaggaccccatcttcccccactgactccacattacctcaccca
gacatggaccagcccagccagcatgtctacacaactggtgttgtgtatgacagtctgatg
ctgaagcaccagtgcatgtgtgggaactatgccaatcaccccgaacacgctggaagaatc
caaagcatctggtcaaggctgcaagagactgggttgctaaacaagtgtgagcgaattcga
ggtcgaaaagccagtctggaggaaatacagctggttcactctgaacatcattcactgctg
tatggcaccagcccactgaacagacagaagctggaccccaggaaactcctaggaaacgtg
tctcaaaaactcttttccttgttgccttgtgggggactgggggtggacagtgacaccgtt
tggaacgagctgcactcggccggggcggcacgcatggcggtgggctgtgtcatcgagctg
gcggcccgcgtggcctcccgggagctgaagaatggctttgctgttgtaaggcccccaggc
catcatgctgaagaatcaacagccatggggttctgcttttttaattcgattgcaattact
gccaaatacttgagagacaagctaaatataggcaagatattgattgtagatctggatgtt
caccatggcaacggtacacagcaggctttttatgctgaccccagcatcctgtatgtttcc
ctccatcgctatgatgaaggcaacttcttccccggcagtggagccccaaatgaggttgga
agtggccctggcgaggggtataacataaatattgcttggacaggtggcttggatcctcct
atgggtgatgttgagtatctcacagcattcaggactgtgatcatgccagctgccaacgag
tttgatccagaaattgtcctggtgtcagcaggattcgacgctgtggaaggccatgaccct
ccgctgggcgggtacaaagtcacagctaaatgttttggtcacctaaccaagcaattgctg
aagctggcagatggccgcgtggtgctggcactggagggaggacatgacctcactgccatc
tgtgatgcctctgaagcctgtataaatgccctcctaggaaatgagctggagcctctcccg
gaagatattgtgcaccaaatccccaatatgaatgcaatagcttctttaaaaaagaccact
gaaattcaaagcaagtactggaagtcagtggagccatactctgtgccagtggattgtgct
ctggctgagtctcagaagcaagagagggaggagacagaaacagtatcagctatggcctct
ctttcagtggatgttgagcagtgtgttcctcaggaaggcagcagagctgctggtgagccc
atggaagaagagccagccttgtga
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integrated database retrieval system
