Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443869
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Entry
135443869 CDS
T09958
Symbol
THRB
Name
(RefSeq) thyroid hormone receptor beta isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04080
Neuroactive ligand-receptor interaction
zle04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135443869 (THRB)
04081 Hormone signaling
135443869 (THRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135443869 (THRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
zle03310
]
135443869 (THRB)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135443869 (THRB)
Nuclear receptors [BR:
zle03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
135443869 (THRB)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
135443869
NCBI-ProteinID:
XP_064560709
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Position
2:complement(39391172..39560472)
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AA seq
516 aa
AA seq
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MVAEWAWLKGSASYQCSPVEMHGNTTASGELGNHLLSKTPHLSKILAKPTVCSPAVFAKH
PGRGLPLWDRLIHLPDRNHKWNVVGITENHFCRKRHFKNYDIQRNGQQLSQCRHASTWTS
TILQPGYTKANFQIMSSAQEYQKEEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITCE
GCKGFFRRTIQKNLHPTYSCKYEGKCVIDKVTRNQCQECRFKKCIFVGMATDLVLDDSKR
LAKRKLIEENREKRRREELQKTIGHKPEPTDEEWELIKIVTEAHVATNAQGSHWKQKRKF
LPEDIGQAPIVNAPEGGKVDLEAFSQFTKIITPAITRVVDFAKKLPMFCELPCEDQIILL
KGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGLGVVSDAIFDLGMSLSSFNL
DDTEVALLQAVLLMSSDRPGLVCVERIEKCQEGFLLAFEHYINYRKHHVAHFWPKLLMKV
TDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgaatgggcatggctgaagggttctgcatcgtatcagtgcagtccagtggag
atgcacgggaataccacagcatcaggagagctggggaaccacttgctttccaaaactcca
cacctgagcaagattttggcaaagccaacggtttgtagccctgcagtatttgccaaacat
ccaggacgtggcctcccgttgtgggacagactgattcaccttcctgacagaaatcacaaa
tggaatgtagtgggcataacagaaaatcatttctgtaggaaaagacacttcaaaaattat
gatatccagaggaatggacagcagctttcgcaatgccgacatgcttcaacttggaccagt
acaattttacagccaggctatacaaaagcaaactttcaaattatgtcaagtgcccaggaa
taccaaaaagaagaaaaaaagtgtaaagggtacatacccagctacttagacaaggatgag
ctgtgtgtagtatgcggggacaaagccaccggataccattatcgctgcatcacttgcgaa
ggttgcaagggtttttttagaagaaccattcagaagaacctccatccaacctattcctgt
aaatatgaaggaaaatgtgtgatagacaaagtaacaagaaatcagtgccaggaatgtcgc
ttcaaaaaatgtatctttgttggcatggcaacagatttggtgttggatgacagcaagagg
ttggcaaagaggaagctgatagaagaaaatcgagagaagagacgtcgggaagagctgcag
aaaaccattgggcacaaaccagagccaacagatgaggaatgggagctcataaaaattgtt
actgaagcacatgtggccaccaatgcacaaggaagccactggaagcagaaaaggaaattt
ctgccagaagatattgggcaggcaccaatagttaatgccccagaaggtgggaaagtggat
ttagaagccttcagccagtttacaaaaattatcacaccagcgattacaagagtggtggat
tttgccaaaaagttgcctatgttttgtgagctgccatgtgaagaccagatcatccttctg
aaaggctgctgtatggagatcatgtccctccgagcagcagttcgctatgaccccgagagt
gagactttaacactgaatggggagatggcggtgacaaggggccagctgaaaaatgggggt
cttggcgtagtgtctgatgccatttttgacctgggcatgtctctttcttcatttaacctg
gatgacaccgaggttgcccttcttcaggctgttctgctcatgtcatcagatcgcccaggc
cttgtttgtgtggagagaatagaaaagtgtcaagagggtttcctcctggcattcgaacac
tacattaactacagaaaacaccatgttgcacacttttggccaaaactgctgatgaaagtg
acagacctgcgaatgatcggagcctgccatgccagccgcttcctgcacatgaaggtggag
tgccccacagaactgttccctccgttgttcctggaagtgtttgaggattag
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