Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443945
Help
Entry
135443945 CDS
T09958
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135443945 (LIMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135443945 (LIMD1)
03036 Chromosome and associated proteins [BR:
zle03036
]
135443945 (LIMD1)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
135443945 (LIMD1)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
135443945 (LIMD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
135443945
NCBI-ProteinID:
XP_064560924
LinkDB
All DBs
Position
2:46725442..46757914
Genome browser
AA seq
588 aa
AA seq
DB search
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKAAGNNPEFEETRRVFATKMAKIHLQQQ
QQQQQEEMLMAAMNGGAAAFHPPRPSPPVARGSKPPPAAEGPRARPCEGAERGFGESGAR
AEAPGSQAGRRGWEAEPDRVPRAGASQPGVGRGEQQAGSPGDPQPCRGGQENGGEGRRGV
GGREPMPAGQKSSSFTNAGTSSAGPEEPPPQQRSSSFSAPSAQPARGFSGSAEPCGPKGG
GDGGQPWYQGVSLSFPPGSAPAAPSVEYQHAAAYPGPGGHFVAHGQNHRPGSGNPEPGSS
RLASRGMVAPNAQQMLFPEGVSGPRSDSGHLDGSSTAKVKLPCQTLLPQPEQGPSAAELK
LEALTQRLEQEMDARPKADYFGTCVKCSKGVYGANQACQAMGNLYHDSCFTCGACSRKLR
GKAFYFVNGKVYCEEDFLYSGFQQSADRCFICGHLIMDMILQALGKSYHPGCFRCVICNE
CLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPSEGSDETIRVVSMDKDYHVECY
HCEDCGMELNDEDGHRCYPLDEHLLCHSCHLKHIENGTTPAAAYQHHY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtacgacgatctaggtctggaagccagcaagttcatcgaggacctcaacatg
tacgaggcctccaaggacggtctctttcgggtggacaaagctgccggcaacaaccccgag
tttgaggagaccaggcgggtgttcgccaccaagatggccaagatacacctccagcagcag
cagcagcagcagcaggaggagatgctgatggccgcgatgaacggaggggctgccgccttc
cacccgccccgtcccagcccgccggtggcgcggggttcgaagccgccccccgccgccgag
gggccgcgggcgaggccctgcgagggagctgagcgcggcttcggagagagcggcgcacgt
gccgaggccccggggagccaggccgggcgccggggctgggaagcggagcccgacagggtc
ccccgagcgggggcctcacaacccggcgtggggcgcggggagcagcaagccgggagcccc
ggcgacccccagccgtgccgcggcgggcaggagaacggtggcgagggcaggcgaggtgtc
gggggccgtgagccgatgccagccggacagaagtcctcctccttcacaaacgccgggacc
tcctcggcggggccagaggagcccccgccacagcagaggtcctcatccttctcggcaccc
tcagcgcagcccgctcgggggttttcaggctccgctgagccctgcggtcccaaaggcgga
ggagatggcggccagccgtggtaccagggtgtctcgctgtccttcccgccaggctccgca
cctgctgctcccagtgtggaataccagcacgccgctgcctaccccggcccaggcggtcac
ttcgtggcccacggtcagaaccacaggcctggcagcgggaaccctgagcccggctcctca
cgcctggcttcccgagggatggtggctcccaatgcccagcagatgcttttcccggagggc
gtgagcgggccacggtcagactctgggcacctggatggctccagcacagcaaaggtgaag
ctgccctgccagaccctccttccgcagcctgagcaagggccgtcggcggcagagctgaag
ctggaggcgctgacccagcgcctggagcaggagatggatgctcggccaaaggcagattac
ttcggtacctgtgtgaagtgcagcaagggcgtgtatggagcaaaccaagcttgccaagcc
atgggcaacctctaccatgacagctgcttcacctgtggagcctgcagtcgaaagctgaga
ggaaaagccttttattttgtcaatggaaaggtgtactgtgaagaagatttcctgtattct
ggtttccagcagtcggctgacaggtgtttcatttgtggtcatttgataatggacatgatc
ctgcaggctctagggaaatcgtatcatccgggctgcttccgatgcgtcatctgcaacgag
tgtctggacggtgtgccgttcactgtagactctgaaaacaaaatctactgtgtcagggat
taccacaaagttttagctccaaagtgtgcagcatgtggacttcccattctgccctccgag
gggtctgatgagaccattcgggttgtgtccatggacaaggattaccatgtggaatgttat
cactgcgaggactgtgggatggagctgaacgacgaagacgggcatcgctgctacccactg
gatgaacatttgctttgtcactcctgtcacctgaagcacatagagaatggcacaacccca
gcagctgcctaccagcaccactactag
DBGET
integrated database retrieval system
