Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443973
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Entry
135443973 CDS
T09958
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03430
Mismatch repair
zle03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
135443973 (MLH1)
03460 Fanconi anemia pathway
135443973 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135443973 (MLH1)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
135443973 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
135443973
NCBI-ProteinID:
XP_064560985
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Position
2:complement(48924556..48942173)
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AA seq
745 aa
AA seq
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MAGVIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKFIQVQD
NGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAK
CAFRATYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRY
AIHNSGISFSVKKQGDTVSDVRTLSNASTVDNIRAIFGNAVSRELIEVGCEDADLAFKMK
GYITNANYSVKKCIFLLFINHRLVESAAMRKAIETVYAAYLPKSTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSNEVVKSA
VNSSVVTKGSSDKVYAHQMVRTDSREQKLDAFLQPVNNPLSAGTTEVAAEVDAGPPKGAE
RPQDAEMEEVSDLVEMVDVQEDAVQPESGHLSPETVPSRKRPREDMDVELEKDDTRQDMT
AACTPRRRIINLTSVLTLQEEISNQAHAKLQEMLREHSFVGCVSPQWALAQYQTKLYLLN
TTKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEGLAEYI
VEFLKKKTEMLKDYFSLEIDEEGNLTGLPLLIDNYVPPLEGLPMFILRLATEVNWDEEKE
CFESLSKELAMFYSIRKQYIIEETNLTNSQSEESESGSTTWKWTVEHVLYKAFRTHLLPP
KHFAEDGNILQLANLPDLYKVFERC
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtcatccggcggctggatgaggccgtggtgaaccgcatcgccgccggcgag
gtcatccagaggccggccaacgccatcaaggagatgatcgagaactgtttggatgctaaa
tctacgagtatccaggtagtagttaaagaaggtggtctgaagttcatccaggttcaagat
aacggctgtggtatcagaaaagaagatctcgacatcgtatgtgagagatttactacaagt
aaactgcaaaaatttgaagacttggctagtatttctacatacggttttaggggcgaggct
ttggctagcatcagtcatgttgcccatgttacagtaacaactaaaacagctgatgcaaag
tgtgcattcagagctacttacagtgatggaaaaatcaaagcccctccaaagccctgtgct
ggaaaccaaggaactcagatcacagttgaagatcttttttacaatgtaaatacaagaagg
aaggctttaaaaaatccaaatgaggaatatgcaaaaatactagaagttgttagcaggtat
gccatccataactcaggcatcagcttttcagttaaaaagcaaggtgacaccgtgtcagat
gttagaaccttatccaatgcctcaacagtggacaacatcagggccatctttggaaatgct
gttagcagggaactcatagaagtgggctgtgaagatgcagatctggcctttaaaatgaaa
ggttacatcacgaatgcaaactactctgtgaagaaatgtatatttttgctcttcataaac
catcggttggtagagtcagccgctatgcgcaaagccatagaaactgtgtacgctgcttat
ttgccaaaaagcacgcacccattcctatacctaagcctggaaatagcccctcagaatgta
gatgtgaatgtgcatcctacaaaacacgaggtccattttcttcatgaagacagtattctg
gagcgtgtgcaacaacatgtagagagcaagttattgggctctaattcctcaaggatgtac
ttcactcagacattgcttccaggggctgactgctcttccaatgaggttgtaaaatcagca
gtaaactcttcagtggtcaccaagggaagcagtgataaagtttatgcgcatcagatggtc
cgcactgattcccgagagcagaaactggatgcttttcttcagccagtgaacaaccccctg
agtgcaggcaccactgaagtggcagcagaggttgatgcaggacctccaaagggtgcagag
aggccccaggatgctgaaatggaagaagtcagtgacctggttgaaatggttgatgttcag
gaggatgcagtgcagccagagagtggacacttgtcccctgagactgtgccttctcggaag
agaccacgggaagacatggatgtagaattggagaaagatgacaccagacaggacatgact
gctgcctgcacccctagaagaagaattatcaacttgaccagtgtgttgactctccaggag
gaaattagtaaccaggcacatgcaaaactccaggagatgctacgtgagcactcatttgtt
ggttgtgtcagtccccagtgggctctggcccagtaccagacaaaactgtaccttctcaac
acaacaaagctcagccaagaactcttctaccagatacttatttatgactttgcaaacttt
ggagtcttaaggttgtcagagccagctcctttatatgagctttcaatgcttgctttagag
gatcctgaaagtggctggacagaagaagatggcccaaaagaagggcttgctgagtacatt
gtggagtttttgaaaaagaagactgaaatgttgaaagattatttctctcttgaaattgat
gaggaaggaaatcttactgggttgccacttctgatagacaactatgtcccaccactggaa
ggactgcctatgtttatcctgcgcttggccacagaggtaaactgggatgaagaaaaggag
tgttttgaaagcctgagtaaagaactagccatgttctactccatcagaaagcagtatata
atagaggaaaccaacctaacaaactctcagagtgaagaatcagagtctggttcaacaaca
tggaaatggactgtggaacatgtgctttacaaagcttttaggactcatcttttacctcct
aaacactttgcagaagatggcaacattttgcagcttgctaacctgcctgacctgtataaa
gtttttgaaagatgttga
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