Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443982
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Entry
135443982 CDS
T09958
Symbol
PDCD6IP
Name
(RefSeq) programmed cell death 6-interacting protein isoform X1
KO
K12200
programmed cell death 6-interacting protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03250
Viral life cycle - HIV-1
zle03272
Virion - Hepatitis viruses
zle04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135443982 (PDCD6IP)
03272 Virion - Hepatitis viruses
135443982 (PDCD6IP)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135443982 (PDCD6IP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135443982 (PDCD6IP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135443982 (PDCD6IP)
Membrane trafficking [BR:
zle04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
135443982 (PDCD6IP)
Exosome [BR:
zle04147
]
Exosomal proteins
Proteins found in most exosomes
135443982 (PDCD6IP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
T2SSM
Motif
Other DBs
NCBI-GeneID:
135443982
NCBI-ProteinID:
XP_064561015
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Position
2:complement(50082315..50112833)
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AA seq
878 aa
AA seq
DB search
MTNFISVQLKKASEVDLAKPLCKFIQQSYPGAEAQAEHCRAAEELSRLRKSALGRPLDKH
ESSLETLLRYYDQLCAIEPKFPFSENQVCVTFTWKDAFDKGSLFGGSAKLALASLGYEKT
CVLFNCGALASQIAAEQNLDNDEGLKAAAKHYQFASGAFQHIKDTVLSALNREPTVDISP
DTVGTLSLIMLAQAQEVFFLKATRDKMKDAIIAKLANQAADYYGDAYKQCQYKDTLPKYF
YFQEVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIGRLQHAADLVKTVASRYDEYIN
VKDLVDKINRALAAAKKDNDFIYHDRVPDLKDLEPIGKASLVKSTPVVVPLSQKFTDLFE
KMVPLQVQQSVSVYNQRKADLVNRSIAQMREATNLANGVLASLNLPAAIEDVSGDTVPQS
ILNKSKSVIEQGGIQTVDQLIKDLPELLQRNKEILDESLRLLDEEEATDNDLRAKFKERW
QRTPSNELYKPLRAEGANYHNILNKAVQADGQVKERYQTHRDTIALLCKPEAELNAAIPS
ANPAKTLQGNEVVNVLRTLLASLDEVKKEREQLENDLKSVNFDMTSKFLTALAQDGAINE
EAISVTELDRIYGSYTQKVQESLKKQEELLKNIQNAHQDFSKMKQSNNESNLREEVLKNL
AVANDNFVELVANLKEGTKFYNELTEILLKFQNKCSDIIFARKTERDELLKDLQQSIARE
PSAPSIPLPTYQTTPAAGSKPAASPAPTPAPRTMVGTKPQPPARPPPPVISAASSSPSAL
APSGTAAAPAAAPAPTPGASAPAASTAPSQAQGPPYPTYPGYPGYCQMPMPMGYNPYMYG
QYNLPYAPSPVYQTPGQPPYPPPQQPGYPFPQQPYYQQ
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacttcatctcggtgcagctgaagaaggcctcggaggtggacctggccaagccg
ctgtgcaagttcattcagcagagctacccgggcgccgaggcgcaggccgagcactgccgg
gccgccgaggagctcagcaggctccgcaagagcgcgctcggccgcccgctcgacaagcac
gagagttcgctggagaccctcctcagatactatgatcagctgtgtgcaattgaaccaaag
tttccattctctgaaaatcaggtctgtgtaacatttacatggaaagatgcttttgacaaa
ggatcgctttttggaggatctgccaaactggctctggcaagtttgggatatgagaagacc
tgtgttttgttcaactgtggagcattggcaagccagattgcagcagaacagaatctggat
aatgatgaaggactaaaagctgcagctaagcactatcagtttgctagtggtgcttttcaa
cacattaaagacacagttttgtcagccttgaatcgagaacctacagtggacatctctcca
gacacagttgggactctcagtcttattatgctggctcaagcccaagaagtcttttttttg
aaagcgacaagagataaaatgaaagatgctatcatagctaaactagcaaatcaagctgca
gattactatggtgatgcttacaaacagtgtcaatataaagatactttgcccaagtatttt
tatttccaggaggtgtttcctgttctggctgcaaagcactgcattatgcaggccaatgca
gaatatcatcaatctatcctggcaaaacaacagaagaaatttggtgaagaaattgggagg
ttacagcatgcagcagatttggtgaaaacggtggcatctcgctacgatgaatacataaac
gttaaagatctggttgacaaaatcaaccgtgcactcgcagctgccaagaaagacaatgac
ttcatttaccatgaccgggttcctgacctgaaagatttggagcccattggaaaagccagt
cttgtgaagtctactccagttgttgttccactcagtcagaaattcactgacctgtttgag
aagatggttccattgcaagtgcaacagtctgtgagtgtttataaccagaggaaggcagac
ctggtaaacaggtcaatagcccagatgagagaagccacaaatctggcaaatggtgtgttg
gcttccctcaatcttcctgctgctattgaagacgtgtctggcgatactgttcctcagtct
attttgaacaagtctaagtctgtgattgagcaggggggaattcagactgttgatcagctg
atcaaagatctgcccgagctgctgcaaaggaacaaagaaattctagatgaatctctgaga
ttattagatgaagaagaagctacagacaatgacctgcgagcaaaattcaaagaacgctgg
cagagaacaccatccaatgaactctataagcctctgagggcagagggagccaattaccat
aatattttgaataaagctgtgcaagcagatgggcaggtgaaggagcgctatcagacccac
cgggatacgattgcacttctgtgtaagccagaggcagagctcaacgcagccataccttct
gccaacccagccaaaacactacagggaaatgaggttgttaatgtcttaagaactttgctg
gccagtctggatgaagttaagaaagagagagaacaactggaaaatgacctgaaatctgtg
aattttgacatgacaagcaaattcctgactgcacttgcacaggatggtgctataaatgag
gaggctatctctgtgactgagttggacagaatttatggaagttacacacagaaagtgcag
gagtccctaaaaaagcaggaagaactgctcaaaaacattcagaatgcgcatcaggatttt
tcaaagatgaaacaatcaaacaatgaatctaatttaagagaagaagtcttgaagaactta
gctgtagcaaatgacaactttgtggaacttgtagccaatttaaaagaaggcacaaagttt
tacaatgagctgacagaaatcctgctgaaattccagaacaagtgcagtgacattatcttt
gctcgcaagactgaaagagatgaactgctcaaagatttgcagcaaagcattgctagggag
cccagcgctccctccatcccgctgcccacgtatcagaccacgccagcagcaggaagcaag
ccagcagcatcgcccgctcccactccagccccaagaaccatggtggggactaaaccacag
ccaccagcacggccaccaccaccagtgatttctgcagcaagcagttccccctctgcatta
gcaccctctggaacagctgcagctcctgctgctgctccagctcctactccaggagccagt
gcacctgcagcaagcactgcaccttcacaggcacagggaccaccttacccaacttatccc
ggttacccagggtattgccagatgccaatgccaatgggctataatccatacatgtatggg
cagtataatctgccatatgcaccctcacctgtgtatcagactccaggacagccaccatat
ccaccacctcaacaacctggatacccttttcctcaacagccttattatcagcaataa
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