Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444025
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Entry
135444025 CDS
T09958
Symbol
NFX1
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135444025 (NFX1)
04121 Ubiquitin system [BR:
zle04121
]
135444025 (NFX1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
135444025 (NFX1)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
135444025 (NFX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
135444025
NCBI-ProteinID:
XP_064561160
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Position
2:58141309..58221051
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AA seq
1140 aa
AA seq
DB search
MAEARPGSGTSNFSPGAAASISGEGQPTDINWVNKDRKDSNSNQNRSNIPIPSPYSERGT
DRESSSTKHHGFCNLESQYGNSEDFHQYFGTSKSLKNRSLQSQRLHRLRNDSTCARNKTR
QSTTDTATGPGISDATLVPGRRAPPRGYSDFLSSESDREVPNADSRGAKPKKAHLIHVSG
RGFREKGKQIHDREKRMSSKQKAELFENFPSLDLTQSDSSESSIGKAFCDASFGSGDEQK
GYNNVNKRYPRKPVWNKPPVEKECQKRHDSHRSKNTKVGKKSSVAYTPKDKNERKKELIA
HKNDENLTSEIRHQLSESLRFSGRKFLLKGDQVPSLHFSWTQYWKKQSDVPKNKETHTGS
LIEQLTTEKYECMVCCEVVRIVAPVWSCQNCYHVFHLNCIKKWARSPASQAEDGNSGWRC
PACQNASVQVPKTYTCFCGKVHNPEWNRNEIPHSCGELCGKKRQCLDCPHLCNILCHPGP
CPSCPAFVTKTCECGQTSHSVRCGQSTKIHCSNVCGNTLNCGKHSCTQVCHSGKCSPCQL
TVQQVCYCGSNFKEVLCGSKDEFSDGFGSFSCQNICGKKLNCGRHNCKQVCHPQPCQLCP
RLPQVVYRCPCGQTPLSKLLELGCVERKICTDPIPSCGKTCGKPLSCGSYELIHTCESLC
HEGDCKPCSHTSNIFCRCGFKKKEIPCALLRNKAAITFMCDKRCNKKRSCGRHKCNEVCC
VDTEHKCSLVCGRKLNCGLHRCEEPCHRGSCQTCWQTSFDELTCYCGESVIYPPVPCGTQ
PPECKKTCTRPHDCDHPVYHSCHSEEKCPPCTYLTQKWCMGKHELRSNIPCHLTDISCGL
RCNQMLKCGMHKCKRICHKGECLIDEECKQPCIIPRLYCNHPCMAPCHPSSHCPTTSCCA
KVDLQCECGRRKESMVCSEASNTYQRIAAISIATKLTDLQLGDSVEISRLITKKEMKQAR
LQCDEECLAIQRNRRLAEALEIDDNSDPFKIRSSGPKYSDLLKEDARKDIKFVSDIEKEM
RMLVEAVNKGKHTKKSHCYPPMNRDHRRIIHELAQVYGIESVSYDNEPKRNVVITAVKIL
LRFSKVSLKVVLKWIPRCTLYKISRIKDLKKLNHLLPHGTSLLDHGSCIAERKCCTSQYI
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcgcggcccggctcaggtacatcgaatttcagccctggtgctgctgcttcc
atttctggagaaggacaaccaacagatataaactgggtaaataaagataggaaagactct
aacagtaatcagaatagaagtaatataccaattcctagtccctattctgaaagaggtaca
gatcgtgaaagctcttccacaaagcatcatggcttttgtaatctggaaagtcagtatggg
aattctgaagacttccaccaatattttggtaccagtaaaagtttgaagaatcgcagcttg
caaagccagagattgcatagattaagaaatgatagcacatgtgctagaaataagacaagg
caaagtactactgatactgctacaggtccaggaatttcagatgctacactagtacctggt
agaagagcacctcctagaggatacagtgattttctctcctcagagagtgacagggaagta
cctaatgcagatagcagaggggcaaagccgaagaaagcacatctgatacatgtatctggg
agaggttttagggaaaagggaaagcagatacatgaccgtgaaaagcgaatgagctctaaa
cagaaagcagagctgtttgaaaattttccatctttggatttgacgcagtctgactcttca
gaatcatccattggaaaggcgttctgtgatgcatcttttggaagtggggatgagcaaaaa
ggctacaataatgtaaacaaaagatatccccggaagcctgtgtggaataaacccccagta
gaaaaggagtgtcagaaaagacatgattctcaccgtagtaaaaatacaaaagtaggtaag
aagtcttctgttgcatatactccaaaagataaaaatgaaaggaagaaagaactcattgct
cacaaaaatgatgaaaacttgaccagtgaaatcagacatcagttgtctgagtctctcagg
ttcagtggaagaaagttcttgctaaagggggatcaagtaccttcacttcatttcagctgg
acccagtactggaagaagcaaagtgatgtaccaaaaaacaaagaaactcatacagggtca
ttgattgaacagctgaccacagagaagtatgagtgcatggtatgctgtgaggtggtccga
atagtagccccagtgtggagctgtcagaattgttaccatgtattccacctgaattgcatc
aagaaatgggcacgatcaccagcttcacaagctgaagatggcaatagcggttggagatgt
ccagcttgtcagaatgcttctgtgcaagttcctaaaacttacacttgtttctgtggtaag
gtgcacaaccctgaatggaatagaaatgaaatcccacatagctgtggggaactttgtgga
aagaagaggcagtgtttggactgtccacatctttgcaacattctgtgccacccaggaccg
tgcccttcgtgcccagcctttgtgacaaaaacatgtgaatgtggacaaacaagtcattca
gttcgctgtggtcaatcaacaaaaattcattgttctaatgtatgtggaaatactttaaac
tgtggaaagcacagttgtactcaagtgtgccactcaggaaaatgttcaccttgccagtta
acagtacagcaagtgtgttactgtggaagcaactttaaagaagtattgtgtggatcaaag
gacgaattttctgatggttttgggagtttctcatgtcagaatatatgtggcaaaaaatta
aattgtgggaggcacaactgtaagcaagtatgccatcctcagccttgccagctctgtcca
cgacttccacaagttgtgtatcgttgtccctgtggtcagactcctctcagcaagttactg
gaactaggatgtgttgaacgtaaaatttgcacagatcctatcccatcgtgtggaaaaaca
tgtggcaaacctctttcttgtggtagctatgagctcattcatacatgtgaaagcctttgc
cacgaaggagactgtaaaccatgttctcacacatcaaatattttttgtaggtgtggcttc
aaaaaaaaggaaatcccatgtgctcttctcagaaataaagctgctattacattcatgtgt
gacaagcgatgcaacaagaagagatcatgtggacgtcacaagtgtaatgaagtttgctgt
gtggacacagaacataagtgctctttggtttgtggtcgtaaactcaactgtgggcttcat
agatgtgaagaaccctgccatcgtggcagttgtcaaacatgctggcaaacaagttttgac
gagttgacttgttattgtggtgaatctgtgatttacccccctgttccctgtggcactcag
ccaccagagtgtaaaaaaacatgcaccaggccacatgactgtgatcatccagtgtaccat
tcatgtcatagtgaggagaaatgtcccccctgtacctatctcactcagaaatggtgtatg
ggcaagcatgaactgcgaagtaatattccttgtcatctcactgacatttcctgtggactt
cgctgcaatcagatgttaaaatgtggaatgcacaaatgtaaaagaatttgtcataaagga
gaatgtcttatagatgaagaatgtaaacaaccatgtattattccaaggctatattgtaat
catccgtgtatggctccatgtcatccttcttcacactgcccgacaacatcctgctgtgca
aaggttgatcttcagtgtgagtgtggaagaagaaaggaaagtatggtatgctccgaagca
tctaatacatatcaaagaatagctgctatatctatagcaactaagctaacagatctacag
cttggggattcagtggaaatcagtaggcttattacgaaaaaagaaatgaagcaagccagg
ttgcaatgtgacgaagaatgcttagctattcagaggaacaggcgtcttgctgaagctctt
gaaatagatgataattctgatccttttaaaatccgttcttctggaccaaagtacagtgac
cttttaaaagaagatgcaaggaaggatataaaatttgtcagtgacattgagaaggaaatg
agaatgcttgtggaagctgtgaataagggcaagcacacaaagaagagtcattgttaccca
ccaatgaacagagatcaccgcagaatcatccatgaattagctcaggtttatggcattgaa
agtgtgagctatgacaacgaaccaaagcgaaatgttgttatcactgcagtaaagatttta
cttcgtttcagtaaggtcagtctgaaagtggttttaaagtggatacctagatgtacacta
tacaaaatcagcagaatcaaagacctaaagaaattaaaccacctgttaccacatggaaca
tccttattagatcatggcagttgcatcgcagaaagaaaatgctgcacatcccagtacatt
taa
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