Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444032
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Entry
135444032 CDS
T09958
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog isoform X1
KO
K22399
pachytene checkpoint protein 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135444032 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135444032 (TRIP13)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
135444032 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
Viral_helicase1
AAA_18
AAA_14
AAA_5
AAA_28
RuvB_N
AAA_24
AAA_25
NPHP3_N
IstB_IS21
NACHT
bpMoxR
ATPase_2
AAA_33
RNA_helicase
AAA_30
TsaE
Cytidylate_kin
AAA_11
ABC_tran
DUF815
AAA_7
AAA_17
TIP49
PduV-EutP
Rad17
Mg_chelatase
ATPase
AAA_19
AAA_3
SLFN-g3_helicase
PhoH
NTPase_1
Motif
Other DBs
NCBI-GeneID:
135444032
NCBI-ProteinID:
XP_064561177
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Position
2:58777769..58792304
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AA seq
461 aa
AA seq
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MAEPQLAPPEALGRAAPPLATEEDPGARKMEDAAGDLKQALPNMCDSVQIHVEVHQKSNS
VAKKEDIRTSVLKLLNRHNIVFGDYKWTEFDDPFLNNNVQSVAIVDTDLKLKDRQPIDLS
TSSLSLHVFHLNEGGPTSENLEEENDDITAAHHWVLPAAEFHGLWESLIYDTEVKSNLLD
YVTTTLLFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSYRYRYGQLIE
INSHSLFSKWFSESGKLVTKMFQKIQELVDDRDALVFVLIDEVESLTAARSAFRAGTEPS
DAIRVVNAVLTQIDQIKRYPNVVILTTSNITEKIDMAFVDRADIKQYIGPPSTAAIFRIY
LSCLEELMKCQIIYPRQQLLTLRELEVIGFIENNVSRLSLILKDISRKSEGLGGRVLRKL
PFLAHALYIQSPSVTMTTFLQALSLAVDKQFEEKKSLADCV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgcagctggccccgccggaagcgctagggcgggcggcccccccgctcgcc
acggaggaagatccgggagcgagaaagatggaagacgctgctggagatttgaagcaagct
ctcccaaacatgtgtgacagcgttcagatccatgtggaagttcaccagaagtcgaacagt
gtggccaagaaagaagatattaggacaagtgtcttaaagctgttgaacagacacaacatt
gtatttggtgattacaagtggacagaatttgacgaccctttccttaacaacaatgtgcag
tctgtggcaattgtggacacagacctgaaactgaaggacagacagcctattgacctgagc
acaagcagtctttctcttcatgtttttcatctgaatgaaggaggaccaacctcggaaaac
ctggaagaagagaatgatgatatcactgcagctcaccactgggtgctaccagcagctgaa
ttccatggtctttgggaaagtcttatctatgacactgaagtaaaatcaaatttactcgat
tatgtgacgacaacattattattttctgacaaaaatgttgacagcaacctgatatcatgg
aacagagttgttttgctgcatggtcctcctggaactgggaaaacttctctctgtaaagca
ttggctcagaagctgacaattcgactgtcatacaggtataggtatggacagttaattgag
ataaacagccatagccttttctctaaatggttttctgagagcggcaaacttgtaaccaag
atgttccagaagatccaagagttagttgatgacagagatgctcttgtatttgtactgatt
gatgaggtggaaagcctcacggcagctcgcagtgccttcagggcaggcacagagccttcg
gatgctattcgtgtggtcaatgctgtactgacacaaatagaccaaattaaaaggtatccc
aatgtagttatcctgactacttcaaatattacagagaaaattgacatggcctttgtagac
agggctgacataaagcaatacattggacctccatctactgcagcaatatttagaatatat
ctttcttgcctggaagaactgatgaagtgtcaaataatatatcctcgacagcagcttctg
acactgagagagcttgaggtgattggcttcatagaaaataatgtgtcaaggttaagcctt
atactgaaagatatctcaagaaaaagtgaaggtcttggtggccgggtcctgagaaagctt
cctttcctagcacatgcactttatattcaatcccccagtgtcacaatgacaacttttctt
caggccctttcccttgcagtagacaaacaatttgaagaaaaaaagagtcttgcagactgc
gtgtga
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