KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444042
Entry
135444042         CDS       T09958                                 
Symbol
TXNL4A
Name
(RefSeq) thioredoxin-like protein 4A isoform X1
  KO
K12859  U5 snRNP protein, DIM1 family
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135444042 (TXNL4A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zle03041]
    135444042 (TXNL4A)
Spliceosome [BR:zle03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    135444042 (TXNL4A)
SSDB
Motif
Pfam: DIM1 Thioredoxin Thioredoxin_7 Thioredoxin_8 zf_RING_Vps8
Other DBs
NCBI-GeneID: 135444042
NCBI-ProteinID: XP_064561208
LinkDB
Position
2:59144180..59153198
AA seq 142 aa
MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL
VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMIDIIETVY
RGARKGRGLVVSPKDYSTKYRY
NT seq 429 nt   +upstreamnt  +downstreamnt
atgtcgtacatgctgccgcacttgcacaatgggtggcaggtggaccaggccatcctgtcg
gaggaggaccgggtcgtggtcatccgcttcggacacgactgggaccccacgtgcatgaag
atggatgaggtcttgtacagcattgccgagaaggttaaaaactttgctgttatttatctt
gtggacatcactgaagtgccagactttaacaagatgtacgagttgtatgatccctgtact
gtcatgtttttcttcaggaacaaacacatcatgattgatttaggtacaggtaataacaac
aagatcaactgggcaatggaagataagcaggagatgattgacattatagaaactgtttat
agaggagcccgcaaaggtcgaggtttggtggtatcaccaaaagattattccactaaatac
agatattga

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