Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444077
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Entry
135444077 CDS
T09958
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135444077 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135444077 (JARID2)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
135444077 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
135444077 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
135444077
NCBI-ProteinID:
XP_064561278
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All DBs
Position
2:63814397..64025315
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AA seq
1235 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHSDGISGSLKAVN
GLLTNGQSKGLGPGSEQLENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPIKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPSNMVYFGSSQ
DDEDEEEEEEETEDTKTATNNASSSCQSTPRKGKTHKHVPNGQVFNGSSKSSKEKEPAQK
HKSKEATPGKERNSEHKAESRKDQAAANHHATTNTGSSTKGLTANNHHTLHRSAQDLRKQ
VSKVNGVTRMSSPSANAASAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKKELVKETKL
NHHKPSSPVNHTISGKIESSNAKTRKQVLSLGASKSNNTAVNGVKVNGKLNQKTCTKEVG
RQLREGLRNSKRRLEETNHMDKIQSPTKRMKGAVNLAEAASKKAAVEKPLLNGHLRKEVP
EKSLERNRPKRATAGKSTPGKQAHGKTENASCENRSTSQAESLHKPQDSMGKHEKGSSKS
GWGMLGEIPILRPSTKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVT
QIQHIHKLGRRWGPNVQRLACIKKHLKSQGITMDELPLIGGCELDLACFVQLINEMGGMQ
QVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHKKLEKEVLLEKEI
LEKRKGPLEGHSENAYKFHSLPRFEPKNGLINGVVHKNGFRNKLKEVDVPLKTGRRRLFA
QEKETTKEDEEEEEEGVLSDLHKCIYKGRSVSLTTFYRTARNIMNMCFTKEPTVAEVEQE
YWRIVEQKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAV
PGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAAEENKLDDVVHTLLQ
ANGTPGLEMLESNVMISPEVLCKEGIRVHRTVQQSGQFVVCFPGSFVSKVCCGYSVSESV
HFATTQWTSMGFKTAKEMKRRRIAKPFSMEKLLYQIATAEAKKENGPTLSTISSLLGELR
DTELRQRRQLYEAGLHSSARYGSHDSSSAGVDGKKKPRKWLQLETSERRCQICQHLCYLS
MVVQENENVVFCLECALRHVEKQKSCRGLKMMYRYDEEQIISLVNQICGKVSGKNGSIEN
CISKPTPKRGPRKRATVDVPSSRLSSSSSSKSASS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaagacccaagaggaatataattcaaaagaaatacgatgacagtgatggg
attccctggtcagaggagagggtggtgcggaaggtcctttatttgtcactgaaggagttc
aagaatgcacagaagcggcagcacagcgatggcattagcgggagcctcaaggcagtgaac
ggacttctcactaatggccaatctaaaggattaggaccaggatcagaacagctggagaat
gagaaggacgatgcatcgcaagtgtcctcaacaagcaacgatgttagttcttcagatttt
gaagaagggccctcaaggaaaaggccaaggctgcaagcacaaaggaagtttgctcagtcc
cagccaaacagtcccagcacaactccaataaagatagtggagccgttgttaccccctcct
gccactcagatttctgacctctccaaaaggaagcccaagacagaagattttctcactttc
ctctgtcttcgaggttctccagccctgcccagcaacatggtgtattttggaagctctcag
gatgatgaggatgaagaagaggaggaggaggagacagaggacacaaaaacagccacaaac
aatgcttcatcatcatgccagtcaacccctaggaaaggaaaaacgcataaacacgtacca
aatgggcaagttttcaatgggtccagcaaatcatcgaaggagaaagaacctgctcagaaa
cacaaaagcaaagaggccaccccagggaaggagaggaacagcgaacataaggctgagagt
cgaaaagaccaggctgctgctaatcaccacgctactacaaacactggctcctctacgaaa
gggctcacggctaacaaccaccacactcttcacagatcggctcaggacttaaggaaacag
gtttctaaagtcaacggggtcactcgaatgtcatctccgagtgcaaatgcagccagtgcc
aaaaagatgagagaagtcagaccttcaccgtccaaaactgtgaagtacactgcaacagtg
acaaagggaactgtcacatacaccaaagccaagaaagaactggtcaaggaaaccaaacta
aatcaccacaaacccagttcacctgtcaaccacacaatctcagggaaaatagaaagtagc
aatgcaaaaacccgcaaacaggtgctatcccttggagcatccaagtctaacaataccgct
gttaatggtgtaaaagtcaatggcaagttgaaccaaaagacatgcactaaggaggtgggg
agacagttgagggaggggctgcgcaactcgaagaggaggctggaagagacgaatcacatg
gacaaaatacagtcgcccaccaagagaatgaaaggggccgtcaacttggcagaagctgcc
agcaaaaaggcagcagtagaaaagcctttgctcaatggacaccttagaaaggaagtgcca
gagaagagtttggaaagaaataggccgaaaagagccactgctggaaagagtacgccaggg
aaacaagcacatggcaaaactgaaaatgcctcctgtgaaaatcgttctacctctcaagcg
gagtccttgcacaagccacaagactcaatgggaaagcacgaaaagggcagtagtaagtct
gggtgggggatgctgggggagattcccatccttaggccctccaccaaggaatttcatgac
ccactgatatacattgagtcagtccgagctcaggtagagaagtatgggatgtgcagggtg
attcctcctccagactggagacctgagtgcaagctaaacgatgaaatgcggtttgtgaca
cagattcagcacatacacaagctaggcaggcgctggggacccaacgtgcagcggctggcc
tgtatcaagaagcacctcaaatctcagggcattaccatggatgaactcccactcatagga
ggctgcgagctcgacctggcctgcttcgtccagctgatcaacgagatgggggggatgcag
caagtgactgacctcaagaaatggaacaagctggcagacatgctgcgcatccccaaaact
gcacaggacaggctggccaagctacaagaagcctactgccagtacttgctctcctatgac
tccctctcccctgaggagcacaagaaactggagaaggaggtcttgctggaaaaggaaatc
ctggagaagaggaaaggacctttggagggacattcagagaatgcctacaagttccattcc
ttgccccggtttgagcccaaaaatggactcatcaatggcgtggttcacaaaaatggcttc
cgcaacaagttgaaagaggtcgatgtcccgctgaagacgggcaggcggcggctctttgct
caggaaaaggagaccacgaaggaggacgaggaggaggaggaggagggagtgcttagcgac
ttacacaagtgtatatacaagggtaggtctgtttctttaacaaccttctaccgaacagca
agaaacatcatgaacatgtgcttcacaaaggagcctacagtagctgaagtagagcaagaa
tactggcggatagtggaacagaaagattgccatgtagcagtgcattgtggaaaagtagat
accaacacccatgggagtggttttcctgtgggaaaatctgaaccattttcaaggcatggg
tggaacctcacagtccttcctaataatacaggatccatcctgcgacatcttggtgctgtg
cctggagtgacaattccttggctaaatattggcatggtcttttctacctcatgctggtct
cgagaccaaaatcaccttccatacattgactacttacacactggtgctgattgcatttgg
tattgcattcctgctgcggaggagaacaaacttgatgatgtggtacataccctgctgcaa
gccaatggcactccagggctggaaatgcttgaaagtaatgtaatgatctccccagaggtc
ttgtgcaaggaggggataagggtgcaccgtactgtacagcagagcgggcagtttgttgtc
tgttttcctggatcctttgtgtccaaagtatgttgtggctatagtgtttccgaatcggtg
cactttgctaccacccagtggacaagtatgggctttaaaacagccaaggaaatgaagcga
cgccgcatagccaaaccattttcaatggaaaagttgctttatcagattgcaacagcagaa
gcaaaaaaagaaaacggaccgactctgagtacaatatcatcgctcctgggagagctcagg
gacacggagctgaggcagcggcggcagctgtacgaggccggtctccactcctcggcgcgc
tacggcagccacgacagcagcagcgccggcgtggatggcaagaaaaagcctcgaaagtgg
ctgcagttggagacgtcagagaggaggtgtcagatttgtcagcacctgtgctatctttcc
atggtggtacaggagaatgaaaacgttgtcttctgcttggagtgtgccctgcggcacgtg
gagaagcaaaagtcgtgccgggggctgaagatgatgtaccgctacgatgaggaacaaata
atcagtcttgtcaatcaaatctgtggaaaagtatctggtaaaaatggcagcattgagaac
tgtatcagcaagcctacaccaaaaagaggacctcgtaagagagcgacagtggacgtgcca
tcatctaggctttcatcctccagttcatccaaaagtgcttcaagttaa
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