Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444088
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Entry
135444088 CDS
T09958
Symbol
NUP153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013
Nucleocytoplasmic transport
zle03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135444088 (NUP153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135444088 (NUP153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135444088 (NUP153)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135444088 (NUP153)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
135444088
NCBI-ProteinID:
XP_064561302
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All DBs
Position
2:complement(64833201..64877434)
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AA seq
1448 aa
AA seq
DB search
MASGGGGGGKIRTRRHHLGAAKPPYARGKQQLGLLSRVTESVKNIVPGWLQKYFNKREDK
CVDMNESANEEENPVNYHHDYANEDAMVIDGRVTPESARINLEEPSTSRSALNFSDVLTR
PSLHRSHLNCTVLDSAVPHCQPSTSSALGIGSPGLSLVKEIKDSTSQHDDDNISTTSGFS
SRASDKDITVSKNTSAPLLWSPEAERSHSLSQHPASSSKKPAFNLSAFGSPSPSLGNTSV
FKTRQLGDSPFYPGKTSYGGAAAAARQTKVQISAYQPPIKRQMKAKQANVQSYGVTSSTA
RRILQTLEKMSSPLADAKRIPSPVSSPLSTPVDRSVLNMTSFQSRQNQVDSQHPPVQKLV
TPKPISLTGSRITYFKPSLKSATNSRKIHQRVDTDHQDMMEESFPAEKPVKSSESNLSYP
KLDTPASNGLSSGGRMDSACGKMRRERERYCASRPGQKQQLEMEQEELPEVPLPISTASL
PTFSFSFPASSAVSSSPSIVSKAVMNKVQPASNVGSPTFVFSSPIVKSTEVEVLPPLSQI
KFTFSVPVVKSSEISRSTDTPVTSILSPGSATVNSTSNKKEEEEEYDGLCKPAKFLKQGS
VLDILKSPGFMAGKSPSCSSAQPVTSTVVYTRPAISSFSAAKDTSKQTSSFWQSDTHDQC
LQNKTTDGKCVTCEAAKVSTAESTKQTVSVSPCVSSKAAVPTVGTLGFEDKFKPAPNTWD
CDTCLVQNKPEATKCIACDTPKPGTGVMPALTMPVVTDNSVTVTSTSSSTGTTVTLGFGD
KFKQPKGSWNCSVCLLQNKAEDSKCVACQSEKPGSSVPVTSSSVSASSGGFLDLDKFKMP
EGSWQCEACLVQNKAEAAKCIACDSAKPGTKAELKGFGTATVSTNAAMPSFTFGVPSSSS
ESSQTLSSTGNFKFGEQSSFKFGIASESASSNTVTGGFKFPTGSGNFKFGVSSSDSKSED
SKKESKSNNFTFGLPSTSSQAPSTFQFGTTNLGQQEKKEEPVLGGFGFATSSTSSLATNE
NKTGVGGFTFGTVAEKDAASPALPFKKSEEKKDETVSTKGGFSFGSVESAPASQFVLGRA
EEKQDSVTSAGPLAFGKKADNEELKAQPIFSSGTAENTKEESTAKPVFNFSFGKPSEKES
EQAKAPFAFGAPTSTCDQGASFSFLSSNSSSTVVPTTSANSSNVFGSSLSSSNPPPVPTP
FVFGQPSNTVTSSVFGNPAESAASQSFGFSQENKPATTSSSTGSTLTPFLFRSGESSTNA
ANSGFTFGATTTSNSTGSSSSFLFGSGPAAPAAGPAFGTSQLPAFGPSAGSGQQSAPSFG
ALATPLFSAASQPAPSAFGSVTSSTQPSVFGQQAAQQPAFGSGTPSAGSVFQFGSNTTNF
SFPNNPGVFTFGANPPASAAPAPPSGTSGFSFNQAPTFTVGTNGKNVFSASGSSVAGRKI
KTAVRRRK
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggcggcggcggcggcggcaagatccggacccgacggcaccacctgggagcc
gcgaagccgccctacgcgaggggcaagcagcagctggggctccttagcagagtgaccgag
tcagtgaaaaacattgtaccaggatggttgcagaagtatttcaataaaagggaagataaa
tgtgtagacatgaatgaatctgcaaacgaggaagagaatccagtaaactatcaccatgat
tatgcaaatgaagatgccatggtaattgatgggagagtcacgcctgaatcagcaagaatt
aatttagaagaaccatccacgagcaggtctgcactgaacttctcggatgtgttgacaagg
ccctcccttcaccggagccatttgaactgcaccgtgttggattccgcggtcccgcactgt
cagccctccacatcttccgcacttggcatcggcagtcctgggctgtccctcgtaaaggaa
ataaaagattctacctctcagcatgatgatgataacatctcaacaaccagtggcttctcc
tctagagcatctgataaagatatcacagtttcaaaaaatacttcagcaccactgctctgg
tccccagaggctgaaagatctcattccctctcacaacatcctgcatctagctctaaaaaa
cctgcattcaatttgtctgcttttggatctccctctccttcacttggaaacacctctgtc
tttaagacaagacagctcggggattctccattttacccaggaaagacttcttatggtggt
gcagctgcagcagcaagacagacaaaagtgcagatttctgcttaccagccaccaataaaa
agacaaatgaaagctaaacaagcgaacgtgcagtcctacggcgtgacaagttccacagca
cggcgcatcttgcagaccttggagaagatgtcaagccctttggcggatgctaaaaggatt
ccatctcctgtttctagtcctctgtcgactcctgtggacaggagtgtgctgaatatgact
agcttccaatccagacaaaaccaggtggattcgcaacatcctcctgtccagaaacttgtg
acaccaaagccaatctccctgacagggagtcggatcacgtattttaaaccatctctgaaa
tcagctactaattccagaaaaattcaccaaagggtagatacagaccatcaagacatgatg
gaggagagttttcctgcagaaaagcctgtaaaatcatctgaaagcaatttgagctacccc
aaactcgatactcctgcatccaatggtctgtcttcaggaggaaggatggatagtgcctgt
ggcaagatgagaagggaaagggagcgatactgtgcatcaagacctggacaaaaacagcaa
ctggagatggagcaggaagagctacctgaagtacccctgcccatcagtacggcatcgctg
ccgacattcagcttcagtttccctgctagtagtgctgtctcctcatcacccagcattgtt
tcaaaagcagtgatgaacaaggtacaaccagcaagtaatgttggcagtcctacatttgta
ttttcatctccaattgtgaaatctactgaggtggaagtgctacctcccttgtctcaaatt
aagtttacatttagtgttcctgtcgtaaagtcgtcagagatttccagatccactgataca
ccagtgacatccatccttagtccaggtagtgctactgtaaacagcaccagcaataagaag
gaagaagaagaagaatatgatgggctctgcaaacctgctaagttcttaaagcaaggaagt
gtgttagacattctaaaaagccctggctttatggctgggaagtcaccctcctgttcatcg
gcacagcctgtgaccagcacagtggtctataccaggcctgcaataagtagtttttctgca
gctaaagacacctctaaacaaacatcctcgttttggcagtctgacacacatgaccagtgt
ctgcagaacaaaaccacagatggcaaatgtgtaacatgtgaagctgctaaagtgtccact
gctgagagtacgaagcagacggtcagtgtgagtccgtgtgtctcctccaaggcggcagtc
cccacagtggggacgctgggctttgaagacaaatttaaaccagcacccaacacgtgggat
tgtgatacctgtctggtccagaacaaacctgaagctacaaaatgtatagcatgtgacaca
ccaaagcctgggacaggagtgatgcctgctctgacaatgccagtggtcacagacaactcg
gtgacagtgacatccacctccagcagcactggcacaacagtcactctggggtttggagac
aaatttaaacagccaaaaggctcttggaactgttcagtgtgccttctacaaaataaggca
gaagacagcaaatgtgtagcttgtcagtctgagaaaccagggagttcagtgcctgtgacc
agtagcagtgtttctgcttcttctggaggttttctggatttagacaaattcaagatgcct
gaaggaagttggcaatgtgaggcctgcttggtccaaaacaaagcagaagccgcaaaatgc
atagcctgtgacagtgcaaagccaggcaccaaagcagagctcaaaggttttggtactgct
actgtgtctacaaatgctgcaatgccatcatttacattcggtgtcccgtcatcgtcctct
gaatcttctcaaacgttaagtagcacaggaaattttaaatttggagaacaaagtagcttt
aagttcggcattgcatccgaatctgcatcgtccaacactgtgactggaggatttaagttt
cctactggttcagggaacttcaaatttggagtttcttcctcagactctaaatcagaagac
agcaaaaaagaaagtaaaagtaacaattttacctttggacttccatctacaagcagtcag
gctccttcaacatttcagtttggaacaacgaatctggggcagcaggaaaagaaagaggaa
ccagttttgggaggttttggttttgctacaagttctacttcttccttagctactaatgag
aataaaactggagttggtggcttcacctttggaactgtggcagaaaaggatgcagcatca
cctgctttgccatttaagaagtcagaagagaaaaaggatgaaactgtttcaacgaaggga
ggcttttctttcggcagtgtggagtctgcacctgcctcacagtttgttttgggaagggca
gaagagaagcaggactctgtcacttctgctggtccattagcatttggaaagaaagctgac
aatgaagagttaaaggcacagcctatcttttcatctgggacagctgagaataccaaagag
gagagcacagcaaaacctgtattcaattttagttttggtaaaccatcggaaaaggagagt
gagcaggcaaaggcaccttttgcctttggggcaccaaccagtacttgcgatcaaggagca
tccttcagcttcttgagctccaattcctccagcacagtggtacccaccacttcagccaac
agcagcaacgtgtttggcagcagcctctcttcctcaaaccctccgccagttcccactccc
tttgtgtttggacagcccagcaacactgtgaccagctctgtttttggcaatcctgcagaa
tctgcagcatctcagtcatttggcttctctcaagagaacaaaccagcaaccacatcttcc
agcactggctcgactctgactccgtttctctttcgttcaggagagagcagtaccaatgca
gcaaattcaggatttacttttggagccacaactacatcaaattcaacagggtcgtcgtct
tcgttcctgtttggctctgggcccgcagcgccggctgctggcccggcctttggcaccagc
cagctaccagcattcgggccgagcgcgggctcggggcagcaaagcgctcccagtttcggg
gcgctggccacaccgttgttttccgctgcctctcagcccgctccctctgccttcggctcg
gtgaccagcagcactcagccctccgtgttcggacagcaggcagcccagcagccagccttt
ggctccggtacccccagtgctggttctgtattccagtttggaagtaatactactaatttc
agctttccaaataacccaggagtattcacttttggtgcaaatcctcctgcatcagcagct
cctgcaccaccttctggtacttcgggattttcgttcaaccaggctccaacatttacagtg
gggacaaatgggaaaaatgttttctctgcctctggatcttcagttgctggtcggaagata
aagactgcagttagacgtagaaagtaa
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