Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444203
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Entry
135444203 CDS
T09958
Symbol
DSCAM
Name
(RefSeq) cell adhesion molecule DSCAM isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135444203 (DSCAM)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
DSCAM family
135444203 (DSCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
Ig_5
C2-set_2
Pur_ac_phosph_N
C1-set
Sp38
V-set_CD47
Interfer-bind
fn3_2
C2-set_3
ChitinaseA_N
DUF6377
Motif
Other DBs
NCBI-GeneID:
135444203
NCBI-ProteinID:
XP_064561578
LinkDB
All DBs
Position
1:complement(4212396..4685229)
Genome browser
AA seq
2009 aa
AA seq
DB search
MWMLAVALLHSISHVFSEELHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGPRFLITSTGA
LYILDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFEHRKAMAGQ
RVELPCKASGHPAPKYRWLKDNVPWEPDSRFRQTVTGLLIENTRPSDSGSYVCEVWNNYG
TAEVIGRLHVTQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGSNV
RITGVNRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSP
GEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPT
IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTK
EVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARS
IALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTRDVSPQLNQATIIDLHPSSTYNIRM
YAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEII
TTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTVKWM
KDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLET
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
AKFATLNYDGSTIPPLIKSVVQSEEGLGTNEGLKMLVTISCILVGVLLLFVMLLIVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTDSLTS
STPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVQGTSR
DLGLGQACLEPQKSRTLKRPTVLEPIPMETSSTRDVQSWQPGAVATLPQREGAELGQAQA
KMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgttggccgtcgccttgctccacagcatctcgcatgttttcagtgaagagcta
cacgccagtctctactttgtcaatgcatctctgcaagaggtagtgtttgctagcaccaca
gggactctggtcccctgtccagcagcggggatccccccggtgacgctcagatggtaccta
gcgacgggcgaggagatctacgatgtcccagggatccgccacgtccaccccaatggcact
ctccaaatcttccccttccctccttcaagctttaataacttaatccatgataacacttac
tattgcacagctgaaaatccttcagggaaaatcaggagtcaggatgttcacattaaggct
gttttacgggaaccctatacagtccgtgtggaggaccagaaagccatgagaggcaatgta
gcagtgttcaagtgcattatcccctcctctgtggaggcatacatcactgttgtctcatgg
gagaaagacacagtctcgcttgtctcaggacctagatttctcatcacatccacgggagcc
ttgtatattttagatgtacaaaacgaagatggactgtacaactaccgctgcatcaccagg
cacagatacacgggagaaacgcgacagagcaacagcgccagactttttgtatcagaccca
gcgaattcagctccatctatcctagatgggtttgagcaccgcaaagccatggcaggacag
cgagtggagctgccttgcaaagcatcagggcacccggcaccaaagtaccgctggctgaag
gacaacgtgccctgggagcccgacagccgcttccggcagacggtgacggggctgctcatc
gagaacacgcggccctcggactcgggcagctacgtctgcgaggtgtggaacaactacggc
accgccgaggtcatcggccgcctgcatgtcacacaaccgctaaaagccaccatcagcccg
cgcaaggtcaaaagcagcgtcggcagccaagtgtccttgtcctgcagcgtgacggggacc
gaggaccaggagctgtcctggtaccgcaacggggagatcatcaaccctggcagcaacgtg
cgcatcaccggcgtcaaccgcgagaacctgatcatggacggcatggccaagagcgacggc
ggcgcctaccagtgcttcgtgcgcaaggacaagatgtcggcccaggactacgtccaggtg
gtgctggaagacggaactcccaaaatcatctctgccttcagcgagaaagtggtgagccca
ggagagccagtgtccctgatgtgcaacgtgaaggggactcccctgcccaccatcacctgg
acactggacgaggaccccatcgtgaaggacggcagccacaggatcagccagatcatcacc
tctgagggcaacgtggtcagttacctgaacatctccaacacccaggtccgggacgggggc
gtttatcgctgcactgccaacaactctgcgggagtcgtcctgtaccaggctcgaataaac
gtaagagggccagcgagcatccggcccatgaagaacatcacggccatcgcggggagggac
acctacatccactgcagggtcatcgggtacccctactactccatcaagtggtacaagaac
tccaacctgctgcccttcaaccatcgccaagtggcgttcgagaacaacggcacgctgaag
ctctcggacgtgcagaaggaggtggacgagggcgagtacacctgcaacgtcctggtccag
ccccagctgtccaccagccagagcgtgcacgtgaccgtgaaagtcccacctttcatccag
cctttcgagttccctcgcttctccatcgggcagagggtgttcatcccctgcgtggtggtc
tcgggggacctgcccatcaccatcacgtggcagaaggacggccggcccatccccgccagc
ctgggcgtcaccatcgacaacatcgacttcaccagctccctgaggatctccaacctgtcc
ctgatgcacaacgggaactacacctgcatagccaggaacgatgcagcagctgtggagcac
caaagccaattaatcgtcagagtgccccccaggtttgtggtgcagcccagcgaccaggac
gggatctacgggaaagccgtcatcctcaactgctctgccgagggctatcctgttcctacc
attgtctggaagtactctaaaggtgctggggttccccagttccagccgatcgcgctgaac
ggccgcatccagctgctcacaaacggctccttgctgatcaaacatgtgctggaagaagac
agtggatactacctctgcaaggtcagcaatgatgtgggagcagacgtcagcaagtccatg
tacctcactgttaaaattccagctatgataacctcctacccaaacaccaccctggcaact
caaggccagaagaaggagatgagctgcacggctcacggagagaaacccatcatagtgcgc
tgggagaaggaagaccggatcattaaccccgaaatgtcccggtacctggtttccaccaag
gaagttggggatgaagtgatttccaccctgcagattctgccaactgtgcgtgaagattct
ggcttcttttcctgccacgccatcaattcttacggggaggatcgtggaataattcagctc
actgtgcaagagccccccgacccccctgagatagagatccgcgaggtgagagctcggagc
atcgcgctcaggtggaccatgggcttcgacggcaacagccccatcaccggctacgacatc
gagtgcaagaacaagtcagactcttgggattctgtccagagaaccagagatgtttcccct
cagctaaaccaggccaccatcatcgacctgcacccgtcctccacctacaacatccgcatg
tacgccaagaaccgcatcggcaaaagcgaggccagcaatgagctcaccatcaccactgat
gaagcagcccctgatggtccacctcaggatgtgcagcttgagcctatatcttcccagagc
atcagagtcacctggaaggctccaaagaagcatttgcagaatggaatcatccgtgggtac
cagataggatatcgggagtacagcgcggggggaaatttccagttcaacatcatcagcatt
gacaccacgggggacagtgaggtttataccctgaataacctgaaaaaattcacccagtat
ggcatggtggtgcaggcctgtaaccgggctgggatcggaccttcttctcaggaaatcatc
accacaactcttgaggacgtgcccagctgccctccagggaatgtgcaagccactgccacg
tccccagaaaccatctccatttcctggtcaacactggcaaaggaaaccctgaatgggatc
ctgcagggattcagggttatctactgggccaacctcttggatggagagctgggagagata
aagaatgtcactactacccagccatccctggagctggatggtttggaaaaatacaccaac
tacagcatccaggtgttggctttcacccgggctggggatggagtgaggagcgagcagatt
ttcacccgcactaaggaggatgttccaggtcctcctgctggagttaaagcagctgctgcc
tcggcctccacggtttttgtgtcctggctgcctcccctgaagctgaacggcatcatcagg
aaatacaccgtgttctgctcccacccctaccccacagtgatcagcgagtttgaagcctct
cccgactcattttcctacagaatccccaacctgagccggaaccgccagtacagcgtgtgg
gtggtggccgtgacggctgcggggagaggcaacagcagcgagatcatcaccgtggagcca
ctggccaaagctcctgccaggattctgacgttcagcgggacggtgacaacgccctggatg
aaggacattgtcctcccctgcaaagctgtgggggaccctgctccaacagtcaagtggatg
aaggatagtaacgggacacccagtctagtgatgattgatgggcgaaggagcatcttcagc
aatggcagctttgtcatcaggactgtgaaggcagaggactctggctactacagctgtgtg
gccagcaacaactggggctcagatgaaatcattttgaatttgcaggtacaagttccacca
gaccagccaagactcactgtatccaaaactacatcttcctctatcactctttcctggata
cctggagacaatgggggcagttctatccgaggttatatcctgcagtactcagaggataac
agtgagcagtggggcagtttccccatcagccccagtgagagatcctacaggctggaaacc
ctgaaatgtggcacctggtacaagttcaccctgactgcccagaacggggtggggccgggg
cgcatcagcgagatcatcgaggccaagacgctcggcaaagagccacagttctccaaggag
caagagctctttgccagcatcaacaccacgcgggtgaggctgaacctgatcggctggaac
gacggcggctgccccatcacctccttcaccctggagtaccggccctttggcaccacggtc
tggaccacggcccagaggacatccctgtccaagtcctacatcctctatgacctccaggag
gccacctggtacgagctgcaaatgagggtgtgcaacagtgctggctgtgcagagaaacaa
gccaaatttgccactctcaattatgacggcagtacaatccctcctctcatcaagtcggtt
gtgcagagtgaggaagggctggggaccaacgaagggctgaagatgctggtgaccatctcc
tgcatcttggtgggggtcttgctgctctttgtgatgctgctgatcgtcaggaggaggagg
agggagcagaggctgaagaggctgcgagatgcaaagagtttggctgaaatgcttatgagc
aagaacaccaggacatcagacacacttaacaagcagcagcaaacactgaggatgcacata
gacattcccagagcccagctgctgatagaggagagggacaccatggagaccattgatgac
agatccacggttctgctcactgatgctgactttggagagacgtccaagcagaagtccctg
actgtcacccacactgtccattaccagtcggtgtcacaagccacagggcccctggtggat
gtctctgatgcccggccaggaacaaatcccaccacgaggaggagcgccaagaccggcccc
accgcgcgcaaccgctacgccagccagtggaccctcaacagaccccaccccaccatctca
gcccacaccctcaccacagactggaggctgcccacgcccaggccagcaggatccgtggac
aaggaaagtgacagctacagcgtcagcccctcccaggacacagaccgggcgaggagcagc
atggtctccacagaaagtgcctcctccacctacgaagagctggccagggcctacgagcac
gccaagatggaagagcagctgaggcacgccaagttcaccatcacggagtgcttcatatcc
gacacgtcctcggagcagctcacggcagggaccaacgactacacggacagcctgacgtcc
agcacgccgtccgagtcgggcatctgcaggttcactgcctccccccccaagcctcaggac
ggagggagggtgatgaacatggcagttcccaaggcacatcgcccaggtgatctcatgcat
ttgccaccctaccttaggatggactttttattgaaccgtggcgtgcagggcacgagcaga
gacctgggtttggggcaagcctgcttggagccacagaaaagccgaaccttgaagcgtccc
accgtgctggagccgatccccatggagacatcctccacgagagatgtccagtcatggcaa
cctggtgctgtggcaacgttacctcagcgagaaggagctgagctaggacaggctcaagca
aaaatgagcagctcccaagaatccctgctggactcccggggccacttgaaaggaaacaat
ccctacgcaaagtcttacaccctggtataa
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integrated database retrieval system
