Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444295
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Entry
135444295 CDS
T09958
Symbol
TDP2
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2 isoform X1
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135444295 (TDP2)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
135444295 (TDP2)
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Motif
Pfam:
Exo_endo_phos
Exo_endo_phos2
Vp20_capsid
Motif
Other DBs
NCBI-GeneID:
135444295
NCBI-ProteinID:
XP_064561792
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Position
2:93569199..93574711
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AA seq
401 aa
AA seq
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MAPVRSCQKLPLCLTEPRSAGFKADPLWNNAVPISDGGSASGITYLKLKSCCTTASAAEE
RAGNSPADTKSQRRRRDRRCSRGRNRDSPGSAEHGEAAVLLHARWRTTEEQRSTCSLGRT
PHCSSIDLTADATTSNAGVNGEDSQQKEDDSNFSLITWNIDGLDLGNVKDRARGICAYLA
LYSPDVVFLQEVIPPHLPLLQMKAGSYTIIPGNIDGYFTAIMLKKSRVKLLKHDIMPFPT
TTMKRNLLVVHVSISGIELCLMTSHLESTKDHSKERIKQLQIVLNEMQKESQSTTVIFGG
DTNLRDSEVAKLGNLPDNIKDAWEFLGKPQHCRYTWDTQSNTNLNAAYKCKMRFDRIYFR
PAVEGGHFIPRSMDLIGLEKLECGRFPSDHWGILCNFDVIL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtgagaagctgccagaagcttcctctgtgtctgacagagcccaggtcagct
ggcttcaaggcagacccgctgtggaacaatgctgtgcccatcagtgatggtggtagtgcc
tctgggataacatacttaaagttaaaaagttgctgcaccacagcatctgcagcagaagag
agagctggaaacagtcctgcagacaccaagagtcagcgaagaaggagggacaggaggtgc
tccaggggcaggaacagagattccccaggcagtgcggagcatggtgaggcagctgtgctt
ctgcacgcccgttggagaaccacagaggaacagagatccacctgcagcctagggaggact
ccccactgcagcagcattgacctcactgcagatgcaactacaagtaatgctggtgtcaac
ggtgaagactcgcagcagaaagaagatgacagcaacttctcactgatcacctggaacatt
gatgggctggatctgggaaatgtgaaagatcgagccagaggaatctgtgcatacctggca
ttatacagtccggatgttgtgtttttacaggaggtcatcccaccacatctccctcttctc
cagatgaaagcaggcagttacactattattccaggtaacatagatgggtatttcactgct
ataatgttaaagaaatcgagagtgaagctactgaaacatgacataatgccttttccaacg
actaccatgaagaggaaccttttagttgtgcatgtgagcatatctggtattgaactttgc
cttatgacttctcacctggagagcactaaagatcactccaaggaacggataaagcagctg
caaatagtgttaaacgaaatgcagaaggagtctcagtccaccactgttatatttggaggg
gatacaaacctcagagacagcgaggttgctaaacttggtaatctgcctgacaacattaag
gatgcctgggagtttttgggcaagccccagcactgccgctacacttgggacacgcagtcc
aacaccaacctgaacgcagcctacaagtgcaagatgagatttgaccgcatttacttccgg
cctgcagtggaaggggggcatttcatcccacgaagcatggacttgattggtttggaaaaa
ctagaatgtggcaggtttcctagtgatcactggggcattctgtgtaactttgatgttata
ttataa
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