KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444346
Entry
135444346         CDS       T09958                                 
Symbol
PPP4R1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
  KO
K15424  serine/threonine-protein phosphatase 4 regulatory subunit 1
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:zle00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:zle01009]
    135444346 (PPP4R1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zle03400]
    135444346 (PPP4R1)
Protein phosphatases and associated proteins [BR:zle01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     135444346 (PPP4R1)
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     135444346 (PPP4R1)
SSDB
Motif
Pfam: HEAT HEAT_2 HEAT_EF3_N Cnd1 TOR1L1_N WRNPLPNID Htt_N-HEAT_1
Other DBs
NCBI-GeneID: 135444346
NCBI-ProteinID: XP_064561914
LinkDB
Position
2:101847698..101910665
AA seq 981 aa
MARARQGAAGEEQEEARAAASAAAFGVDDYSSESDVIIIPSALDFVSQDEMLTPLGRLDK
YAASENIFNRQMVARSLLDTLKEVSDDERDCIAVLERISRLADDSEPTVRAELMEQVPHI
AMFCQENRPSIPYAFSKYLLPIVVRYLADQNNQVRKTSQAALLVLLEQELIERYDVETKV
CPVLIDLTAPDSNDDVKTEAVAIMCKMASMVGKDITERLVLPRFCEMCCDCRMFHVRKVC
AANFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATSQEVRRTKLS
TLFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEEDGKNPEDCDSAQENSSEQ
VRTTEDGTTDEEHNRTEDLSSHCDDNDDFATKLENVVEDQNTVSNNSKRESDFQTESSFH
CTLPSESCGEMADENEQSSHCCTTAVQEAGLNSQETSLSEQELYNSFHFWRTPLPEIDID
FELQQTSDIKLDREIQELTMPVSPSIPMATRKELEEMIENLEPHIDDPDVKGQAEEIRTG
VVSILLKPLSKGSPAQVEVLSAALRASSLHPQEETMASVGKGTDSQTELTINDQQSFKPI
LSDIVPLIRDTVEGMDSPLHYIHNDSDLSTNSSFSPEEERKSKVQDVVPQALLDQYLSMT
DPSRAQTVDTEIAKHCAYSLPGVALTLGRQNWHCLKDTYETLASDMQWKVRRTLAFSIHE
LAVILGDQLTAGDLVPVFNGFLKDLDEVRIGVLKHLHDFLKLLHVDKRREYLYQLQEFLV
TDNSRNWRFRAELAEQLILLLDLYSARDIYDYLRPIAFNLCADKVSSVRWISYKLVSEMV
KKLYMASTPTFVIDLMNELVEKFCRCHKWSGRQTFVFICQSISEDDCLPMDQFAVHLLPH
LLHLASDKVPNVRVLLAKTLKQTLLEKEYFLNSANSHQEAVEQTIMALQMDGDSDVKYFA
SIHPASTKIADDAMSTASSTY
NT seq 2946 nt   +upstreamnt  +downstreamnt
atggcccgggcacggcagggcgccgccggggaggagcaggaggaggctagggccgctgca
tctgcagcagcatttggtgtggatgactacagctcagagtctgatgtgattattatacct
tcagccctggactttgtctcacaagatgagatgttgacgcctttgggaagattggacaag
tacgctgcaagtgagaacatatttaacaggcaaatggtggctcgaagtttgctggacact
ttgaaggaagtcagtgatgatgagagagattgtattgctgtgttggagagaatcagcaga
ttagctgatgattcagagccaacagtgcgggcagaactgatggagcaggtgcctcatatt
gccatgttctgtcaagaaaacagaccttcaatcccttatgctttttccaaatacctgcta
ccgattgtggtgcgatacctcgccgaccagaataaccaggtcagaaagacaagccaggca
gcgttgttagtgctgttggagcaagaactcattgagagatacgatgtggagaccaaagtg
tgccctgtgctgatagatctgacagctccagacagcaacgacgatgtgaagacagaagct
gtggctattatgtgcaaaatggcctccatggttgggaaggacatcacggaaagacttgtg
cttcccaggttctgcgagatgtgctgtgactgcaggatgtttcacgttcgtaaggtatgt
gcagccaattttggagatatctgcagtgtggttggacagcaagccactgaagaaatgctg
ctgccaaggtttttccagctctgctctgataatgtgtggggagttaggaaagcctgtgct
gagtgcttcatggcagtttcttgtgcaacatcacaggaagtccggaggacaaaattgtca
accctttttattaatttgattagtgatccttcacgatgggttcgccaagcagcttttcag
tctctggggcctttcatatcaacttttgctaatccatccagcagtggccagtactttaaa
gaagaagatggtaaaaacccagaagattgtgattctgcacaggaaaacagcagtgagcaa
gtcaggaccacagaagatggcacaacagatgaagagcacaacaggacagaggatctgtct
tcacattgtgatgataatgatgattttgcaacaaaacttgaaaatgtcgtagaagatcaa
aatacagtgtcaaataactccaagagggaaagtgatttccagactgaatcatccttccat
tgcactttgccttcagaatcttgtggggaaatggcagatgagaacgagcaaagttctcat
tgctgtacaacagctgtgcaggaggctgggctgaattcacaggaaacctctctttcagag
caggaattatacaactctttccatttctggaggactccacttcctgaaatagatattgac
tttgagcttcagcagacttctgatataaaactcgatagagaaattcaggaactcactatg
ccagtgtctccaagcattcctatggcaacaaggaaagaattagaagaaatgatagaaaat
ttggaaccccatatagatgatccagatgttaaagggcaggcagaggaaatcaggacaggt
gttgtctccatcctgttaaagcccctaagcaagggcagtccagcacaagtggaggtgttg
tctgctgcactcagagcatccagtttgcatcctcaagaagagacaatggccagtgttggc
aagggaacagattcacagactgaactaaccatcaatgaccaacaaagttttaaacctata
ctgagtgatattgtgcctttaattcgtgacactgttgagggtatggattctccacttcac
tatattcataatgattcagatttgagtaccaacagtagtttcagccctgaagaagaaaga
aaatccaaagtacaggatgttgtccctcaagccttgctggatcagtacctgtccatgact
gatccgtcccgcgcacaaacagtggacaccgagattgccaagcactgcgcctacagcctg
cccggcgtggctctgaccctgggcaggcagaactggcactgcctgaaggacacctacgag
actctggcctctgacatgcagtggaaggttcggcggacactggcattttccatacatgag
cttgctgtcatccttggagaccagcttacagctggagatttggttcctgtcttcaatggc
tttttgaaggacctagatgaagtgaggataggtgtgcttaagcacttgcatgacttcctg
aagcttcttcatgttgacaaaagacgagagtatctttatcagcttcaggaattcctggtg
actgataacagcaggaactggcgtttccgtgctgagctggctgagcagctgattttgctc
ctggacctgtacagtgccagggacatctatgactacctgcggcccattgcgttcaacctc
tgtgcagacaaagtgtcctctgtccgctggatttcctacaagctggttagtgaaatggta
aaaaagctgtacatggcttcaacaccaacttttgtgatagacctcatgaatgaacttgtt
gaaaagttctgtagatgccacaaatggtctgggcggcagacttttgtctttatttgccag
agtatcagtgaagatgactgcctgcccatggaccagtttgctgtgcatctgttgccacac
ttactacacttggcatctgacaaggttccaaatgttcgagtcctgctcgcaaaaacattg
aagcaaacccttttggagaaagagtatttcctgaattctgccaactctcaccaagaagct
gtggaacaaacaattatggctcttcaaatggatggtgacagtgatgtcaagtattttgca
agcatccaccctgccagtaccaaaattgcagatgatgccatgagcactgcttcatcaact
tactaa

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