Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444355
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Entry
135444355 CDS
T09958
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04510
Focal adhesion
zle04512
ECM-receptor interaction
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135444355 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135444355 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135444355 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Motif
Other DBs
NCBI-GeneID:
135444355
NCBI-ProteinID:
XP_064561951
LinkDB
All DBs
Position
2:102912888..103012990
Genome browser
AA seq
3102 aa
AA seq
DB search
MGSGGRRLLLALLAATSLLCVPGQGQPRGLFPAILNLASNAHISTNATCGEKGPEMFCKL
VEHVPGRPLRNAQCRVCDSHSANPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWVTITLD
LRQVFQVAYVIIKAANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITPRIGPP
TYKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLRLQRIR
TLNADLMTLSHNDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKKLQCQC
EHNTCGESCNKCCPGYHQKPWRPGTLSAGNKCEKCNCHNKAEDCYYNQSIADQKRSMDIH
GQFIGGGVCLNCTQHTTGINCEMCADGYFRPQEVSPYEDHPCYPCDCDPFGSLSSVCVKD
EHHSDSQRGTWPGQCQCREGYAGEKCDRCAFGYRGYPNCLRCNCSLAGSINEDPCTEPCL
CKKNVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLTWPISQISDMTGWLVTD
LYKARSVQPQRSQFDGPHQISINNTEAVKVLKNTYYWSAPEAYLGNKLTAFSGDLKYTVS
YDIPMESVDSDIVSSVDVIIQGNGHILSTRAAGLSLQPYEEYSNSVRLVADNFIEFNTKK
AIDREMLMTVLANVTHLLIRANYNIAKKAVYRLDSVTLDTASANVIDLSSAPDVEFCECP
QGYTGLSCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCFACQHNTTGPFCDQC
LPGFYGNPSQGTSADCRPCACPLSSAANNFSPTCQLSEEGGIVCDKCLPGYTGSQCERCA
NGYYGNPLMAGQSCAPCECNGNVDPQEEGHCDPFTGQCLKCLGNTAGHHCEKCADGYYGD
AVIDKNCHACACHVNGSLSSTCHHETGVCSCKSNVFGERCDKCLNGYYGLLTGLGCVPCN
CSQFGSVSEDCSDQGQCHCVPGVAGEKCDRCAHGFYAFQDGGCTPCDCAHTQNNCNADSG
QCICPPHTQGQKCELCEENYWGLSPKLGCKACNCSSAGSASPQCDVLTGQCQCKTEFGGR
DCSRCALGHRDYPDCVACDCDLSGTKAETCNGTEGVCGCEEETGVCTCKENVFGLQCSEC
KPGTFGLSANNALGCTPCFCFGMSTSCSELEDHVRIPITLTPDQAILHVVAQSNLTGTVE
GVFSQFPDVLLDAAIVRKYLNTETFYWKLPEQFQGDQLMAYGGKLRYTVAFYALDGFGTS
NFEPQILMKGGHASKLVIYVDIPSPENGVRTDKEVEMKEDSWKYFNSVSDEPVVRSDFMS
VLSNVEYILIRAAYGQGLQQSRIANISMEIAVKFEEMHLGRPPAYLVEQCRCPAGYTGLS
CQSCAPGYYRGKHTELSVREPHTLIAPCVPCQCNNHSETCDPDTGKCLNCRDYTVGDYCS
ACAPGYYGKVTGSASDCSPCACPRANPVSFSPTCVLKGAHDYHCDACLPGYEGQYCERCS
PGYYGAPQLPGGSCRVCQCNPGGSIHGNCDSATGQCLCKPGVTGQLCQECEPRHLLLEDE
CVSCDDNCTGVLLNSLDSLDEAMLSVNLTGIDRVPYGILSELENAAQHLKRSIVTREDPT
YLLDTTKENLLNLSGGIDYLHEETTRFLKKAQQLDTMTQKTRNKSQELTGFIDTVHTTIK
VLAEVALSLNETLGLDLPLSNATSQSLQDDISALLDALRKKDFVQQHHNATTVLKAAEKL
LTQVQKEYLKPQQELTELITNASQFLSKQNSRLQDAQDLVNEALANINETHRLFPLISSN
LAELNDKKLKIKEGEEVSTMLIKEGEVLLNDAATLAQDVENSTFNVEVHQDELVLWNTKL
RHHVDELVMQMSVRGVLDLVYRAEEHATQFQRLADALESDLSRVRNVTLNTTAAIYTHSS
VKSVIERTESLADDASRVVNGPLDLPEESFSLQGKETLQLSSKFQNEAKNLKKKSDGLLF
GLNGLNKKVEKIQESTNKIGNQLNDSLLTLRALHNNTRKYMLEVKELAVSANTSAVVDLS
HFGEFSQKLMNTSSALSQVNDTLRKTSELITDSSKAAFTVEKQVKEVEAQASLLLDRLKP
LKMLEENLNRNLSEIKELISQARKQAASIKVAVSAERDCIRAYQPQISSTNYNTLTLNVK
TAEPDNLLFYLGSNGKTDFLAVEMRRGKVALLWDLGSGPTRVEYPDFQIDNNKWHRIHAT
RFGKTGTLSIEEMNSNQKPSPKSGTSLGTASILDVNKSTLMFIGGLGGQIKKSPAVKVTH
FKGCLGEASLNGKPIGLWNYIEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALRSTVT
QILISFSTFSPNGLLLYLTSNGTRDFLSLELVDGKVRVTVDLGSGPLVLTTENRYNNGTW
YKISFNRNKKQGILAVMDAYNLNYKETKQGESPGVASDLNRSDKDPIFIGGLPRSRALRK
GLNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIHSVSIMKNGYIELVPKSLSPE
SELMATFATKNSSGIILAGISRGLERRQRRQAHLPFFSIMLIDGHLAVHVNAGDRASTRK
VVLQSANGTYSDGQEHSVILIRNKRIITVQVDESKPAELRLGSAAENSPINISNFYAGGI
PAGEGILGLKLAGSFHGCISNLIFNKELLYFTTSMKYEHVDMDSCFLSEKPKTAVQPSDI
MNSHDVMIQHELQALPVPLRPLTKKVVCAKDELPDRVQGAHQFGLSKGSHLTLLFNQSAV
RKKLSVQLNLRTFASSGLIYYMAHQNQVDYAALQLYGGQLHFSFDLGKGKAVALHPAVVS
DGKWHTVKTEYVKRKGTIIVDGQELVAVNALGDGSTLDVEGKLYVGGLPLDYVPKNLGNV
THSIPACIGSMTINGKQLDNESPVSIFAVNKCYETVQDGTFFDGSGFAALVREGYKVRSD
VNITLEFRTTAAHGVLLGVSSARVDAVGLEIVHGKVLFHVNNGAGRLTASYEPRGTNSLC
DGKWHKLQANKSKHHISLIIDGNLVHTDNPYVQSTSADTNNPIYVGGYPADVKQNCLTSK
TSFRGCLRNLVLTKGQHRELFDFSRAFDLRGVFPHSCPGAEH
NT seq
9309 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcggcgggcggcggctgctgctggcactgctggcggcgacttcgctgctgtgc
gtgccggggcagggccagccccgaggcctgtttcctgccattttgaacctggccagcaat
gctcacatctccaccaatgccacctgtggagagaagggaccggagatgttctgcaagctg
gtggagcacgtccccggacggcccctgcgcaacgcccagtgccgcgtctgtgacagccac
agtgccaatcccaaagagcagcacccaatttccagtgcaatcgatggtaccaataactgg
tggcagagtcccagcattcagaatggaaggcaataccactgggtgaccattaccttggat
ttaaggcaggtctttcaagttgcatatgtcatcatcaaagctgctaatgctccacgacct
ggaaactggattttggaacgctccatagatggcacggagttcaggccatggcagtactat
gcaattagtgataccgaatgtttaactcgttacaacatcacaccaagaattgggccccca
acttacaagagggatgatgaagtgatctgcacctcctattattccagactagttcccctg
gaacatggagagattcacacctcactgatcaatggtaggcctagtgctgatgacccttca
cagaagctgttggaatttacttctgcacgatacattcgcctgcgactgcagcgtattaga
actctgaatgctgacctcatgactctcagccataatgatcctaaggagctagaccccatt
gttaccagaaggtactactattcaataaaggacatctctgttggtggcatgtgtatttgt
tatggccatgctcgaagctgccctttggatgaaatcacaaagaaattgcagtgccagtgt
gaacacaacacatgtggagagagctgtaacaagtgctgtccaggctaccaccagaaacca
tggagaccagggaccctttctgctgggaacaaatgcgagaaatgtaactgtcataacaaa
gcagaagattgttattacaaccagagtattgcagatcagaaaaggagcatggatattcat
ggccagtttataggaggtggtgtgtgtttaaactgtactcaacatactactgggatcaac
tgtgaaatgtgtgctgatggatattttagaccacaagaagtttctccctatgaggatcac
ccctgctatccctgtgactgtgacccctttggctctctgagttctgtctgtgttaaagat
gagcaccattctgactcccagcgtggcacttggccaggccagtgtcagtgcagggaaggt
tatgcaggagagaagtgtgatcgctgtgcgtttgggtatcggggctacccgaactgcctg
cgttgtaactgcagcctggctgggagcatcaatgaagatccatgcacggagccttgtctt
tgcaaaaaaaatgtagaaggtgaaaactgtgatctctgtaaaccaggattctacaatttg
caagaaagaaatcctcagggctgcacagagtgtttttgctttggtgtttctgatgtctgt
gacagtcttacatggcccatcagtcagatttcagacatgactggatggcttgttactgat
ctgtacaaggcaaggagtgtgcagcctcagcgaagccaatttgatggaccccatcaaata
agcattaacaacactgaggctgtgaaagtactgaaaaatacttattactggtcagcacct
gaggcatatctaggaaataaactcacagcttttagtggagacttgaagtatacagtatct
tacgacattccaatggaaagtgtggacagtgatatagtgtctagtgtggatgtcatcatt
cagggtaacgggcatattctgagcacaagagcagcaggcttgtcattacagccatatgag
gagtattctaattcagtgagacttgtagcagacaatttcatagagtttaatacaaaaaag
gcaatagaccgagaaatgctgatgactgttctggcaaatgtgacccatcttctcatcaga
gccaattacaacattgccaaaaaagctgtgtacaggctggactctgtgaccctggatact
gcaagtgcaaatgttatagatctttcttcagctccagatgtggaattctgtgaatgtcct
cagggttacacaggattatcctgcgagtcgtgtctgcctgggtactaccgtgtggatgga
atactctttgggggcatttgtcagccctgcaagtgcaatgggcatgcaactgagtgtgac
attcacggtgtttgctttgcttgtcaacacaacacaacaggacctttctgtgatcagtgc
ttgcctggcttctatggaaatccatcccaaggaacatctgcggactgccggccctgtgca
tgtcctctgagttctgctgcaaacaatttcagtcccacttgccagctgagtgaagaaggt
ggaattgtctgtgacaaatgtcttccaggctatactggttctcagtgtgaaaggtgtgct
aatggttactatgggaatcctcttatggctggacagtcgtgtgctccttgtgaatgcaat
ggcaatgtagaccctcaagaagagggccactgtgatcccttcacaggacagtgcctgaaa
tgtctggggaacacagcaggtcaccactgtgaaaagtgtgctgatggctattatggggat
gcggtgattgacaaaaactgtcatgcctgtgcctgccacgtgaatggctccctttcaagt
acttgtcaccatgagacaggtgtctgctcctgcaaatcaaatgtatttggagaaagatgt
gataaatgcttgaatgggtattatgggctgcttactgggcttggctgtgttccctgcaac
tgcagtcagtttggctcggtgtctgaagactgcagtgatcaggggcagtgtcactgtgtg
ccaggagtggctggagagaagtgtgaccgctgtgctcatggcttttacgcattccaggat
ggtggctgcacaccctgtgactgtgcccatactcagaacaactgtaatgctgattctggc
caatgcatttgtccccctcacactcagggacagaagtgtgaactctgtgaagaaaattac
tggggactctctcctaaacttggttgcaaggcttgcaactgtagcagcgctggttcagcc
agtccccagtgcgatgtgttgacaggccaatgccagtgcaaaactgaatttggagggcga
gactgttccaggtgtgccttgggccacagggactacccagactgtgttgcctgtgactgt
gatttgagtggaaccaaagcagagacgtgtaatggcaccgaaggagtttgtggttgtgaa
gaagaaactggtgtctgcacctgcaaggaaaatgtttttggtctacaatgcagtgagtgt
aaacctggaacttttggtctgtctgctaacaatgcactaggatgtactccatgcttctgt
tttgggatgtccacatcttgttcagaactagaagaccatgtgagaattcctataacatta
actccagatcaggctattctgcatgtagtagcccagagtaacctgactggaacagtggaa
ggagtattttcacaatttcctgatgttttattggatgctgccatagtcagaaaatactta
aatacagaaacattttactggaagttgccagagcagtttcagggagaccagctcatggcc
tatggagggaagctgagatatactgttgccttttatgctttggatggctttggaacctca
aattttgagccacagattctaatgaaaggaggtcatgccagtaagttggtcatctatgtc
gacatcccttctccagaaaatggagtgagaactgacaaggaagtggaaatgaaggaggat
tcttggaagtattttaactctgtgtctgacgagcctgtcgtacgttctgacttcatgtct
gtgctcagcaatgttgaatacatccttatcagggcagcttatggccaaggattacagcaa
agcagaattgcaaatatctcaatggaaattgcagtcaagtttgaagaaatgcatctaggc
agacctccagcttatcttgtagagcaatgtaggtgtcctgctggttacactggattgtcc
tgccagagctgtgctccaggatactacagggggaagcatacagaactcagtgtaagagag
cctcacactctgatagcaccttgtgtgccatgtcagtgcaacaaccacagtgaaacctgt
gatcctgacacagggaagtgcttgaactgcagagattacacagttggtgattactgcagt
gcttgtgccccaggctactacgggaaggtaactggatctgccagtgactgctctccctgt
gcttgtcccagagcaaaccctgtcagttttagtcccacttgtgtcctgaaaggtgctcat
gattaccactgtgatgcctgtctcccaggatatgaaggacagtactgtgaaaggtgctcc
cctggctactatggtgccccccagctccctggtggcagctgccgtgtgtgccagtgcaat
ccgggtggttccattcacgggaattgtgacagtgccaccgggcagtgcctctgcaagccg
ggggtgacaggacagctctgccaggagtgtgagcccaggcaccttctgctggaggacgag
tgtgtctcttgtgatgacaactgcacaggagttttattaaacagtttggacagtctcgat
gaggccatgctttcagtgaacctcactggtattgaccgtgtgccctatgggatattgtca
gagctggagaatgcagcacaacatctgaagaggtctatagttactagagaagacccaact
tacttgttagatacaacaaaagaaaatcttctgaatttgtcaggaggaattgattatttg
catgaagagacaactagatttttgaaaaaagctcagcaacttgacacaatgactcagaaa
accaggaataaaagtcaagaactgactggctttattgacacagtgcacacaaccatcaaa
gtacttgctgaagttgctttatcactaaatgaaacactgggcctggatctaccactgtca
aatgctacatctcagagcctgcaggatgatatttctgcccttttggatgcactgcgcaag
aaggattttgttcagcagcaccataatgctaccacagtcctaaaagctgcagaaaagttg
ttgacccaggttcagaaggagtatctcaaaccccagcaggaacttactgaactgataaca
aatgccagccagttcttatcaaagcagaacagcagactgcaggatgcccaggacctggtg
aacgaggcacttgctaacatcaatgagacccatcgcttgtttcctctcatctccagcaac
ttggcagagttaaatgacaaaaagctaaaaataaaggaaggtgaagaagtctcgaccatg
ctcattaaagaaggggaggtcctactgaatgatgctgctactcttgcccaagatgtagag
aactctacatttaatgtggaagtccaccaggatgagttggtcctgtggaacaccaaactg
cgacatcacgtggatgagctggtgatgcagatgtctgtgagaggagtgcttgacttggta
tacagagctgaggaacatgccacccagttccaaagacttgcagatgcacttgagagtgac
ctttccagagtaagaaatgtgactctgaacacaactgctgctatctacactcactccagc
gttaaaagtgtgattgaaagaacagaaagtttggcagatgatgcatccagagttgtgaat
ggccccttggatttaccagaggagtctttcagtcttcaggggaaagaaactctacaactt
agctccaaatttcagaatgaagctaaaaatctgaagaaaaaaagtgatggacttctattt
ggattgaatgggttgaacaaaaaggtagaaaagattcaggaaagtacaaataaaattggc
aaccaacttaatgattctctgttgacactcagagcattgcataacaataccaggaaatac
atgcttgaagtgaaagagctggctgtgtctgcaaacaccagtgctgtggtggatttaagt
cactttggggagttcagtcaaaagctaatgaatacatcttctgcattgtcccaagttaat
gacactttgaggaaaacaagcgaactcataactgattcatcaaaagctgcattcacagtt
gaaaaacaagttaaagaagttgaagcacaagcaagtcttttattggatagactcaaacct
ttgaaaatgcttgaggagaacctgaacagaaacctgtctgaaattaaagaacttatcagc
caggcccgcaagcaggcagcatctattaaagttgcagtatcagcagagagagattgcatt
cgtgcctatcaaccccaaatttcatctacaaattacaacaccttaacactcaatgtgaaa
actgctgaaccagataacctccttttctacttgggtagcaatggaaagacagacttcctg
gcagtggagatgcgacgtggtaaggtggctcttctttgggatttgggctctggaccaaca
agagtggaataccctgattttcaaatcgacaacaacaaatggcacagaatacatgccacc
aggtttggaaaaacaggtaccctcagcatagaggagatgaactccaatcagaagccttca
cctaaatctggaacctctctggggacagccagcatattggatgttaacaagtcaacccta
atgtttattggaggacttggagggcaaatcaagaaatcacctgctgttaaggtgacccat
tttaaagggtgcctaggagaggcatccctgaatggcaaacctattggtctttggaactac
atagaaagagagggcaagtgcaatggctgttttggaagcccacaggatgaggacacttca
ttccattttgatggcagtggatactcagttgtggagaaggcactccgctcaacagtgact
cagatattaatatctttcagtaccttttcaccaaatgggcttcttctctatcttacttca
aatggcactagagacttcttgtcccttgagcttgttgatggcaaagtgagggtgactgtt
gatcttggctcaggaccccttgttcttacaacagaaaatcgttacaacaatggaacgtgg
tataaaatctcattcaatcggaataagaagcaaggaattttggcagtcatggatgcatat
aaccttaattataaagaaaccaagcaaggagaatctcctggggttgcctcagacctgaac
cgctctgataaggacccaatcttcattggtgggctgccaagatcgagggctctgaggaaa
ggtcttaatagtagaatgtatgtgggatgcatcaagaatctggaaatatctcgttccacc
tttgacttgcttagaaattcatatggagtaagaaaaggctgtgtattggagcctattcac
agtgtaagcatcatgaaaaatggatatattgagttggtacctaaatccctaagcccagag
tcagaactgatggcaacttttgctacaaagaacagcagtggcatcatccttgctgggatc
agcaggggactggaaaggcgacaacgaagacaagcacacttgcccttcttttccatcatg
ctgattgatggtcatcttgcagtgcatgttaatgctggagatagagcaagtactaggaaa
gtagttcttcagtctgctaatggaacatacagtgatggacaagaacactctgtcatccta
attcggaataagaggatcataactgtacaggtggatgaaagtaaacctgcagaattgagg
cttggttcagcagcagaaaatagccccattaatatttccaacttctatgctggtggcatt
ccagcaggagagggcatcttggggctaaaattggctggctcctttcatggctgtatcagc
aaccttatttttaacaaggagcttttatattttaccacttccatgaagtatgagcatgtg
gatatggacagctgctttctgtcagagaagcctaagacagcggtacagccatcggacatc
atgaacagccatgacgtcatgattcaacatgaacttcaggctttaccagttcccctgaga
cctctcacaaaaaaagtagtttgtgcaaaagatgagctgcctgatcgtgttcaaggtgcc
catcagtttggactttccaaaggcagccacttgaccctgctcttcaatcagtctgctgtc
aggaagaagctttccgtccagctgaatctcagaacctttgcctccagtggcctgatttac
tacatggctcaccaaaaccaggttgattatgcagccctacagctttatgggggacagctc
catttctcatttgatttaggcaaaggaaaagcagtagctcttcaccctgctgttgtcagt
gatggaaaatggcatacggtaaagacggaatatgttaaaagaaaaggaacaatcattgtg
gatggacaggagctggtagcagtcaatgccctgggagatggtagcaccttggatgtggaa
gggaagctctatgtgggaggactccccttagactacgtgccaaagaatcttgggaatgtt
actcacagtattcctgcctgcattggtagcatgacaattaatggcaaacaactggacaac
gagagtcctgtctctatctttgctgtgaataaatgctatgaaacagtgcaggatggtacc
ttctttgatggaagtggctttgctgctcttgtcagggaaggctacaaggtgcgttctgac
gtgaacatcacgctggagttccgcaccacggcggcgcacggcgttctcctgggcgtcagc
agcgccagggtcgatgcggttgggctggagatcgtacacggcaaggttttattccatgtc
aacaatggagctggcaggctaacagcttcctacgaaccaagaggcacaaatagcttgtgt
gatgggaaatggcacaagcttcaagcaaacaaaagcaaacatcacatttcgctgataatt
gatgggaatttggttcacactgataatccctacgtccagtcaacatctgcagatacgaac
aatcccatttatgttggaggttatcctgctgatgtcaagcaaaactgcctcacaagcaag
acttcattccgtggctgtttgaggaaccttgttttgaccaagggccaacatagagaattg
tttgactttagcagagcttttgacctgcgtggagtatttcctcattcctgccctggggct
gagcactga
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integrated database retrieval system
