Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444401
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Entry
135444401 CDS
T09958
Symbol
TAF4B
Name
(RefSeq) transcription initiation factor TFIID subunit 4B isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135444401 (TAF4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135444401 (TAF4B)
03036 Chromosome and associated proteins [BR:
zle03036
]
135444401 (TAF4B)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135444401 (TAF4B)
Coactivators
SAGA/TFTC/STAGA complex
135444401 (TAF4B)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135444401 (TAF4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
135444401
NCBI-ProteinID:
XP_064562073
LinkDB
All DBs
Position
2:107612464..107684744
Genome browser
AA seq
825 aa
AA seq
DB search
MSASAAPVRLMPGGRPEQAAACAPAAGSAPDRGGPAAAVPAGPAAAPPRPGGTPVLRGAA
PGVPRPVAPKGPPAATLQLPANLQLPPGTVLIRSSNGHLMLVSQQSIGQAENQTQSNTSV
RPSVPTSTPAIRICAVQNSGTQLVKKIAAAPVKTLSQKTNAVVSTVQTPAVIQPAAATAS
VTTVTAVKPLSTGTPVKLPVTGPPAQAISQKAVSVKAEGTTVAQTSTSTEMLENVKKCKN
FLATLVKLASSGPQAPEMGQNVKNLVQNLLEAKIEPEEFTKKLYTELKSSPQPYLVPFLK
KSVLALRQLMPDPQSFIQQCMEQTAPTQEEVSTCPSAAPAPSTGAATSAVATTALPAVKP
SPAAVTAPVVVTPVLASTSAAAPLQAVKAVPSPATGTVALGPAASVLTVASSGLTAVQPG
KSVLTSAVPASSLQAAKPVLVSTVASSAATPLQPLKPVMGTPIGIKISQPSSIVARSAGA
PQVVKVKQLVVQQPSGAIVKQVSTLPQPSVLTLQTSAEKKMPLNTLVQSSQFPAGSILKQ
ITLPRNKILSLQASPVQKVKMKENGATSFRDEDDLNDVTSMAGVNLSEENASILAANSEL
IGTVIHSCADEPFLSLEALQSKILNIGKRHDIMELNSDVVNLISHATQERLRGLLEKLTV
IARHRVSTHKGSDKYIVCSDTRAQLRFLEKLDHLEKQRKDEEEREMLLRAAKSRSNKEDP
EQLRLKQKAKEMQQLELAQMQQREANLTALAAIGPRKKRPLDSLTIGSGLEGLKSNGIAG
SSGFSLTKQMLCPRVTRVCLRDLIFCMEQEREMKHSLRLYRALLK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctcggcggcccccgtcaggctcatgcccggcgggcgcccggagcaggcggcc
gcctgcgccccagccgcgggctcggcgcccgaccggggcggccccgccgccgctgtgccc
gccgggcccgccgccgccccgccgcgtcccgggggcaccccggtgctgcggggggccgct
cccggcgtcccgcggccggtggcgcccaaggggccgcccgcagccaccctccagttgccg
gccaacttgcagctgcccccaggaactgttcttatcagaagcagtaatggccacctaatg
ctggtatctcaacagtcaataggacaagcagagaaccagacacaaagcaacacaagtgtg
agaccatctgtgccaaccagcactcctgcaatcagaatatgtgctgtgcagaattctggc
acacagttagtaaagaaaatagcagctgctcctgtgaaaacgttatctcaaaaaacaaat
gctgtggtttctactgttcagacacctgctgtaatacagccagcagctgcaacagctagt
gttactacagttactgctgtaaagcctttgagtactggaacacctgtaaaacttccagtt
acaggaccacctgcacaagctatctcccaaaaggcagtctctgtgaaagcagagggcaca
acagtagcacagaccagcacttctacagagatgctagagaatgtgaagaaatgcaagaat
tttcttgctacgctagtaaaactggcgtctagcggacctcaagcccctgagatgggtcag
aatgtgaagaatctggtgcaaaacctactggaagcaaaaattgaaccagaagaatttaca
aagaagttgtacacagagcttaagtcatctccacaaccatatttagttcctttcctcaag
aaaagcgtgcttgccttacggcaactgatgcctgatcctcagagctttatccagcagtgt
atggagcagacagctccaacccaagaagaagtttccacttgtccctctgcagcaccagct
ccttccacaggagcagcaacctcggctgtagcaacaactgctcttccagctgtaaaaccc
tcacctgcagcggtcacagcccctgtagttgtcacaccagtccttgccagcacatcagca
gcagctcctctgcaggctgtgaaggctgttccttcccctgccacggggacagtggctctg
gggcccgcagcttccgtcctcaccgtggcatcatcggggctgaccgccgtccagcctggc
aagtcagtcctcacctctgccgtgccagcgtcctctctgcaggctgcaaagccagtgctg
gtctctacagtggcatcttcagcagcaacccctctgcagcctctgaaaccagtcatggga
accccaattggcattaaaatctcgcagcccagctccatcgtggcgcggtcagcgggcgct
ccgcaggtggttaaagtgaagcagctggtagtccagcaaccatcgggagccattgtcaag
caagtatccacactcccacagccctcagtgctcaccctacagacatctgctgagaagaaa
atgccactgaatacacttgttcaaagcagccagtttcccgcaggttccattctgaagcaa
attaccttgccaagaaataaaattctgtcgcttcaagcatctcctgttcaaaaagtgaaa
atgaaagagaatggagcaacatccttcagagatgaagatgacctgaatgatgtgacttct
atggctggggttaatctcagtgaggagaatgccagcattttggcagcaaactctgagctc
attggcacggtgattcactcttgtgcagatgaaccatttctgtctctggaagctcttcag
agtaagatcttgaacataggtaaaaggcatgacattatggaacttaactctgatgttgtg
aacttgatctcccatgctacacaggaaagattacgagggctcctggaaaaactaactgta
attgctcggcacagagtatcaacccacaaggggagtgacaagtacatcgtatgtagtgac
accagagcacaactgagatttcttgagaagcttgatcacctagaaaagcagagaaaagat
gaagaggaacgtgaaatgttgcttcgagcagctaagagccgttccaataaagaagatcca
gagcaactgcggttaaagcagaaagcgaaagagatgcagcagctggaattagcacagatg
caacaaagagaagccaacctcacagctttggcagccattggaccaaggaagaaaagacca
ttggattcactgaccattggatctgggctcgagggtttgaaaagcaatggaattgctgga
tcatcaggttttagccttacgaagcagatgctctgtccacgagtaacccgtgtctgtctc
agggacttgatattctgcatggaacaagagagggagatgaagcattctctacgcttgtac
cgtgcccttctgaagtga
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