Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444406
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Entry
135444406 CDS
T09958
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135444406
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135444406
Cell adhesion molecules [BR:
zle04515
]
Cadherins
Major cadherins
135444406
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
RibLong
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
135444406
NCBI-ProteinID:
XP_064562092
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All DBs
Position
2:109544243..109569400
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AA seq
1247 aa
AA seq
DB search
MDAFVVAALRTPARPGSPPSAEAGHTDQSQLRAPWGSRAGHCEGCPVQAPRAGRGRDSGR
AGPGRAGLGPGCLLPPPGAIPPGTLHPPAATCAPLPPRAAAFPCGAAAGAEGIKHFILCP
APSHPGTAVMSRGPAAAGRLLVLLICLNYGHGLYVKVYNRNDRSGLLSHPSSPVRQKREW
TVPPAFIREEEDNSYKNPIARIHSDLEDTGIVVTYTISGQGVTEPPYGLFVINGKTGDLN
ITGRVDREKTPILLVRGHALDKNGAKLEEPIDLPIKVVDINDNFPVFSHEVFVGSIEELS
ETGTIVLRINATDADEPNNLNSKIAFRIVSQSPSAAFSMDKNTGEVRVAKINLDRETQSS
YSLVVEAKDRGGEKGGNAATCSLEIKILDVNDNLPVVESRAFEGSIEENRANVEIMRIKV
FDKDEEFSDNWLANFTFVSGNEGGFFKIVTDTQTNEGILTVVKELDYETMQSLNLGVVVT
NKAEFHKSIKPSYKAETIPIKIKVINVQEGPVFPGGTKIIEASEKLQIKQVLGQYQAYDE
DTGKVAERITYMKGKDAANWITVDSVTGEIRLAKNLDYESPHVVNGTYTITMLGVTTDSP
RKTITGTVVIQVKDENDNCPVIVNPVRTVCSDAKLVDVTAHDLDGYPFSYPFSFTVIDEP
EGTAENWIIVSGNDTSVQLVPQNLKPGRAEVPMLIKDFQGVSCALPQSLQLTVCECTDDG
VCQERFIGAKSVGLGPAAIALIILAFLLLLLVPLLLLLCPGGMGAKGFGGAKTFTDIPDH
SEAMLRQWNSEGAAPEEKALLSFIPPTALGNVKGGTTAAAAGAAAGMSGEGALIGAGSSV
SHVGEHHSTITRERWEEQRRLLSATDYGAMAAGAAEGMAGVDGKTVMSGGGVAVGAAGAM
NEEFLRDYFNDKAVSFAEEDEEQAAKDCLLVYSQGESGSPHGSVGCCSFIEGDLDDHFLD
DLGDKFKTLAEICIGRQINMKDGGYKNESGFGLSEAKSQSLHQQTASTSEQAFASGSGFQ
SIPPVHTGSSTGESTLSKEVVTETAFSSSHSGQHSAQHLPTGHTESSVTVTETSYSVGAP
ARTAPVFLDPQFKENVVVTERVLAPASSIQGMVKIPDLPHGSNMVVTERMVKSAGAGPGA
LTVQDLPDSQYVVVRERERVLVPAAEQGSLSFPAAAQEHSTVRNERVVQSRAEQATGASS
GRQEHALITDSPLNVMGSDSQGPSHAGATLSKSSRVTKYSTVQYTRS
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgtttgttgtcgcagccctgcgcactcccgcccggcccggctcgcctccctcg
gcggaagcggggcacacagaccaaagccaacttcgggcgccctggggaagccgggccggc
cactgcgagggctgccccgtacaggctccgcgggcggggcgcggacgggactcgggccgg
gccgggccgggccgggcggggctggggcccggctgcctcttgccccctcctggcgcgatc
ccgcccggcacactccacccacccgcggctacttgtgcccccctccctccgcgggccgcg
gcattcccgtgtggggcggccgcaggagctgaggggataaaacactttatcctctgtcct
gccccatcccatcccggtacggcggtcatgtcgcggggcccggcggcggcggggcggctg
ctggtgctgctgatctgtctgaattatggacatgggctctatgtgaaggtttataaccga
aatgacaggagtggcctgctgtctcatcccagcagcccagtcagacagaagagagaatgg
acagtccctccagctttcatacgggaggaggaggacaattcctacaagaatccaattgct
agaatacattcagatcttgaagatacaggaattgtagtaacttacactatatctggtcaa
ggagtaacagaacccccatatggactatttgttatcaatggaaagactggtgacctgaac
ataacaggaagggtggacagagaaaagactcccattcttcttgtccgaggccatgcacta
gataagaatggggcaaaactggaagagccaatagacctcccaattaaagttgtggacata
aatgacaattttccagtgttttctcatgaagtttttgttggttcaattgaagaattaagt
gaaacaggtacaattgtgttgaggataaatgcaacagatgcagatgaaccaaataatcta
aattccaaaattgctttcaggattgtttctcaaagccctagcgctgcattcagcatggat
aagaatactggcgaggttcgagtggcaaaaataaaccttgacagagagactcaaagtagc
tattctttggtggtggaagcaaaggaccgtggtggtgaaaaaggtgggaatgctgcaaca
tgttctttagaaatcaagattctggatgtcaatgacaatctgcctgttgttgaaagtcgt
gcatttgaaggaagcattgaagaaaacagagcaaatgtggaaatcatgcgaataaaagta
tttgacaaagatgaagagttttctgataattggctggcaaactttacatttgtttctggc
aatgaaggtggttttttcaaaattgtaacagatacccaaacaaatgaaggaattttgact
gttgtgaaggagctggattatgaaacaatgcaaagcctaaacttaggcgttgttgttaca
aacaaagcagagtttcacaagtcaattaaacccagttacaaagcagaaacaattccaatc
aaaattaaggtgatcaatgtgcaggaaggccctgtgttccccggtggcacaaaaattatt
gaagcaagtgagaaactccagataaaacaggttcttggacagtatcaagcctatgatgaa
gacactggaaaagtagcagagcgcattacatacatgaaaggaaaagatgcagcaaactgg
atcactgtagactcagtcacaggtgaaatccgacttgctaaaaatcttgattacgaatca
cctcatgtagtaaatggtacctacactatcaccatgttgggtgtaactactgattcccca
aggaaaacaatcactggcacagtcgtcattcaggttaaagatgagaatgataactgccca
gttattgtgaaccctgtgcggactgtgtgttcagatgcaaaattagttgatgttacagct
catgacttggatggttaccccttcagttatcccttcagctttactgtcattgatgagcca
gaagggacagcagaaaactggataattgtatctggaaatgacaccagtgtgcagctggta
ccacaaaacctgaagccaggcagagctgaagttcccatgctaataaaggatttccaaggg
gtcagctgtgctctgccccagtctctgcagctgactgtttgtgagtgtacagatgatggt
gtgtgccaggagaggtttattggagcaaagtcagtgggtctgggaccagcagcaattgca
ctaatcatcttggcgtttttacttctgctgcttgttccactgttgctgctgctgtgtccg
ggtggcatgggagccaagggatttggtggagcaaagacatttactgacataccagaccac
agtgaagcgatgctgcgtcagtggaacagtgaaggagcagctcctgaggagaaggcattg
ctaagcttcattccacccactgcgcttgggaacgtgaaaggaggaacaacagcagcggca
gcaggagcagcagcaggaatgagtggagaaggagctctaataggagcaggcagctctgtc
tctcatgtaggagaacatcacagcaccattaccagggaaagatgggaagagcaaaggcgt
cttctttctgctactgactatggagccatggcagctggagcagctgagggcatggcaggt
gtggatgggaagacagtcatgtctggaggaggagttgctgtgggagcggctggagccatg
aatgaagaattcttaagagactacttcaatgataaagctgtctcttttgcggaagaagat
gaagagcaagctgcaaaagactgtctcctggtttattcccagggagaatcaggctcccct
catggctccgttggctgctgcagctttattgagggggatcttgatgaccattttcttgat
gatttaggagacaagtttaagactctagcagaaatatgtataggtagacagatcaacatg
aaagacggtggctacaagaatgaatcaggttttggtcttagtgaagcaaagtcacagtcc
ttacatcagcaaactgcttccacctctgaacaagcgtttgcctcaggcagtggtttccag
tccatcccacccgtacatacaggcagtagcacaggagaaagcaccctgtccaaggaggtg
gtcacagaaacagccttttcatcatcccactctgggcagcacagtgcccagcacctcccc
acgggccacacagagagcagtgtcaccgtgacagaaacatcctattctgtgggggctcct
gcccgcacagcccctgtctttttagacccccagtttaaggagaacgtagtggtgacagag
agggtgctggcacctgcatcgagcattcagggcatggtgaaaatccctgatttgccacat
ggaagtaacatggtggttacagaaaggatggtgaagtcagcaggtgcagggccaggagcc
ctgacagttcaggatcttcctgactcgcagtatgtcgtggtgagggagcgagagagggtc
cttgtgcctgctgcagagcagggctcgctcagcttccccgctgcagcacaggagcacagc
acggtgcgcaatgaaagggtggtgcagagcagagctgaacaggccacaggggccagctca
ggaaggcaagagcatgctctgatcacagactccccacttaacgtgatgggctctgactca
caagggccgtctcatgccggggccacactgagcaagtcttccagggtcaccaaatacagc
acagtgcagtacactcgctcatag
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