Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444407
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Entry
135444407 CDS
T09958
Name
(RefSeq) desmoglein-1-like
KO
K07599
desmoglein 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135444407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135444407
Cell adhesion molecules [BR:
zle04515
]
Cadherins
Major cadherins
135444407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
Cadherin_CELSR2_9th
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
135444407
NCBI-ProteinID:
XP_064562094
LinkDB
All DBs
Position
2:109511646..109532680
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AA seq
1176 aa
AA seq
DB search
MDWLPHRTAAFLFLLLVLLDFSTGFHVEVKEWDENGMARWKTFRRQKREWIKFAAACREG
EDNSKRNPIAKIRSDCEEDNPITYSISGVGIDRAPYGIFVVNPRTGEINITSIVDREITP
VFVIRCFAKHSVTGIDLEPPLELRVRVLDINDNPPVFAQTVFTGSVEESSMDNTLVMKII
ATDADEPNHLNSKIAFKIESQEPSGPPMFIMNKYTGELHLANYLDREQHSSYTLVVKASD
RDGAADGISSLCSCNVKVIDVNDNFPTLAQSSFSASISENSLSSELLRIQALDADEEFTD
NWLAEFFFISGNEDNCFEIVTDRATNQGILRVIKELDFEHIRTHALMIGVRNVAAFHHSV
AHEYQIFGTPLTVEVKNLIEPPRFHPSSVVFSLPQSARVNYVVGTYTAMDEDTRTIASNV
VYSIGRDPAAWFRINQNTGEIILNKVISRDSVYLVNGQYQAEVLAITRGVPRYTATGTVV
LSLDGINANCPTINTEVRKVCMHSPSVVISAKPRDGVVYATPFTFSIHGEPQTTWIIRRI
NDSSAELVGQNIDFYLYRIYVVVRDSQGRRCARPHIIPVQACQCDSRNYCTSGATRIIII
GGGGGAGGGGGAGGGGGGTTGGGGGGTGGGGGGTGGEGREDGGQQGGGGDYGGDYEDHTQ
SQGYTDGYEGGDEGYTAYTDSGYGNENYGRQLDSNTTLSGAAIGLMFLGGLIFVLIPILM
SMSDCCGCGPGAAGGVGTGFEPVPECTEGAIHPWGIEGAQPEDRDVSHILAPTTGAGGDF
GEPSDIYNNTYGGGGVVASGVEETTGVGYGTGTGYGTAGGISGTGEAKGSIGGTIKEYRE
GGVNMAFLDNYFSEKAYVYADEDEGRPANDCLLIYDHEGVGTPVGSVGCCSFIGEDTDET
YLDTLGPKFKTLAEICLGKEIEPFPDANPPWPGVNIPFPSPESDLNLPPPGTTIIVNGSA
PMPPTAGTTTVVTENTYTSGTTIQPPRPMPDPLLHGNMMVTETYTSSQPSVCVDPLRASN
VVVTERVVGPASASELRGMLDIPDLTEGSNVIVTERVIAPNSRLPASLSIPDLVDGSNVV
VTERVFRPASGMPGSLINIPSELSNAHNVMVTERVVSGAGMSSLGATSMGANLGSLSSTG
QMLSAECHLGQGMSTASPGTSRRRMTKYSTMQYSSQ
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggattggctccctcaccgaacggctgcttttctgttccttttgttggtactcttggat
ttcagcacaggatttcatgtagaggtaaaagaatgggatgaaaatggaatggcaagatgg
aaaacctttagaagacaaaaacgtgaatggatcaaatttgctgcagcttgtagagaagga
gaagacaactctaagaggaatccaattgccaaaatccggtctgattgtgaagaagacaat
ccaatcacatacagcatctctggagttggaattgatcgtgcaccctatggaatatttgtt
gttaacccaagaacaggagaaattaatataacatcaatagtggatagggaaataacacca
gtatttgttatacgttgctttgctaaacactcagtgaccggtatagatttggaaccacct
cttgaacttcgagtcagagtcctggatataaatgataatcctcctgtatttgcacaaact
gtatttacaggatctgttgaagaaagcagcatggacaacacactggtgatgaaaatcatt
gcaacagatgcagatgaacctaaccatttgaattctaaaattgccttcaaaatagagagt
caggaaccttctggtccacccatgttcattatgaataaatacacaggagaactccatctt
gcaaattatcttgacagagagcaacatagtagctacactctggttgtgaaggcatcagac
cgggacggcgctgcagatggaatatcatccctttgtagctgtaatgtgaaagtcattgat
gttaatgacaactttccaactcttgctcaaagctccttttcagcaagtatttcagaaaat
tcactcagttcagaactgctacgaatacaagctctggatgctgatgaagagtttacagac
aattggttagcagagtttttctttatatccggtaatgaagataactgttttgaaattgtt
acagatcgagctacaaatcaaggaatccttagagtaattaaggagctggactttgaacat
atccgaactcacgcactgatgatcggtgtcaggaatgtagctgcattccaccactctgtt
gcacatgagtaccagatatttgggacacccctcacagtagaagtaaaaaatttgattgaa
ccaccaagatttcatccatcttcagttgtgttttccctgccacaaagcgcaagagtgaat
tatgttgtaggaacgtacacagccatggatgaggacactagaaccattgcatcaaatgtt
gtatatagcataggacgtgatccagctgcctggttcagaatcaatcaaaacactggtgaa
atcatactgaacaaagttattagccgggattctgtctatctggtcaatgggcagtaccaa
gcagaggttctggctatcaccagaggggttcctcgatacactgctacaggcaccgttgtg
ctttcactagatggcatcaatgccaattgcccaactattaatactgaagtgaggaaagta
tgtatgcattccccatcagtggttatctcagcaaagcccagggatggtgttgtctatgct
acccccttcacattcagcatacatggtgaacctcagactacatggattatcagacgaata
aatgactcctctgcggaactagtgggccagaacatagacttttacctttataggatctac
gtcgttgtaagggacagccaaggccggcgctgtgctcgaccacacataattcctgtgcaa
gcttgccagtgtgacagtcggaactactgcaccagtggggccacaagaataattatcatc
ggtggtggtggtggcgctggtggtggtggcggcgctggtggtggtggtggtggcactact
ggtggtggtggcggcggcactggcggtggtggcggcggcactggtggagagggccgggaa
gacggagggcagcaaggtggtggtggtgattatggaggagattatgaggaccacacacag
tcgcagggttatactgatggctacgaaggaggtgatgaaggatatactgcctacactgac
agcggttatggaaatgaaaattatggcaggcaattggattcaaataccacacttagtggc
gctgccattggcttgatgttcctcggcggactaatatttgttttgattccaattttgatg
tcaatgagcgactgttgtggctgtggacctggcgctgcaggtggagttggaactggattt
gaacctgtacctgaatgtacagaaggggcaattcatccatggggaatagaaggtgcacag
cctgaagacagggatgtctcacacattcttgccccaacaaccggtgcaggaggtgatttt
ggtgaaccttctgacatatataataacacatatggaggaggaggagtagtagcttctggt
gttgaagaaactacaggtgttggctatggcactggtactggctacggaacagctggagga
atttctggaacaggagaagcaaaagggtcaattggaggaacaataaaagagtatcgagaa
ggaggagtgaacatggccttcctagacaactatttctctgagaaagcatatgtgtatgca
gatgaagatgaaggtcggccggcaaatgactgcctattaatttatgatcacgaaggagtt
ggtactcccgttggctccgtgggttgctgcagctttattggagaagatacagacgaaaca
tacttggatacattaggaccaaaatttaagaccttagcagagatttgtctgggcaaagag
atcgaacctttccctgatgctaacccaccctggccaggcgtcaacattcccttccccagt
cctgaaagtgatctaaacctcccgccaccgggcaccaccatcattgtcaacggaagtgca
cccatgcctcccaccgctggcactacaacggttgttactgaaaacacctacacatctggg
acaaccatacagccaccgaggcccatgccagatcccttgctccatggcaacatgatggtg
accgagacatacacctccagccagccctctgtttgcgttgaccctctgcgtgcatccaac
gtcgttgtgacggagagggttgtggggcctgcgtctgcctctgaattgcgtggcatgctg
gatatccccgatctcacagagggctccaacgttatcgtcacggaaagagtaatcgcgcct
aactcccgactcccggcatctctgagcattcctgatttggtagatgggtcaaatgtggta
gtgacagaaagggtgttcaggcctgcctctggcatgccaggcagtctaataaatattccc
tcagagttatccaatgcccacaacgtgatggtcacagagagagtagtgtcaggggctggg
atgagcagcctgggagcaacaagcatgggagcaaatctggggagcctgagcagcacaggt
cagatgctcagtgccgaatgtcatcttggtcagggaatgagcacggcatctccaggcacc
tcccggagacgaatgacaaagtacagcaccatgcagtactccagtcagtaa
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