Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444411
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Entry
135444411 CDS
T09958
Symbol
RNF138
Name
(RefSeq) E3 ubiquitin-protein ligase RNF138 isoform X1
KO
K10668
E3 ubiquitin-protein ligase RNF138 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135444411 (RNF138)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135444411 (RNF138)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135444411 (RNF138)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_C2HC_14
zf-Di19
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-Nse
zf-RING_4
zf-MIZ
zf-RING_6
zf-rbx1
Prok-RING_4
Sina_RING
zf-RING_10
U-box
RING_XB3-XBAT31
GAGA
zf-C2H2_jaz
Zn_ribbon_RlmA
Motif
Other DBs
NCBI-GeneID:
135444411
NCBI-ProteinID:
XP_064562102
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All DBs
Position
2:109793540..109805180
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AA seq
248 aa
AA seq
DB search
MAEGAAAAPACFNEDDFYCPVCQEVFKTPVRTANCQHVFCRKCFLTAIRESGTHCPLCRG
SVTKKERTYPKRALDVENSMKKASGGCRCCEKQVRFSWMRQHYKTCKKYQDEYGVSSIMP
NLQISQDATGNSSRSDAIPDTGEMANNQILQGETSGHPTFKCPLCQEANFTRQRLLDHCN
NRHLYQIVPVICPICVSLPWADTNQVTRNLVSHLNLRHRFDYGEFVNLQLDEEAQYQNAV
QESCHVNF
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggggccgcggcggccccggcgtgcttcaacgaggatgatttttactgcccg
gtgtgccaggaggtgttcaaaacgcccgtgaggaccgccaactgccagcacgtgttttgc
aggaagtgcttcttgacagctataagagaaagtggaacacactgtcctctctgccggggg
agcgtgactaaaaaagaaagaacgtatcccaaaagagctctagatgttgaaaacagtatg
aagaaagcttctgggggctgtagatgctgtgagaagcaggttagattttcatggatgaga
cagcattataaaacgtgtaagaagtatcaggatgaatatggtgtttcttcaattatgcca
aacttacagatttcccaagatgcaacagggaacagtagcaggagtgatgctatacctgat
actggcgagatggctaataatcaaatacttcaaggagaaacaagtggacacccaaccttc
aaatgccccctgtgtcaggaggccaattttaccagacagcgcttgctggatcactgtaat
aatagacatctttatcagatcgttcctgtgatctgtcctatttgtgtatctcttccttgg
gcagatactaaccaggttactagaaatcttgttagccatctaaatctaagacaccggttt
gactacggagaatttgtgaatcttcagcttgatgaagaagcccaataccaaaatgcagtt
caagaatcctgtcatgtgaacttttaa
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