Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444429
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Entry
135444429 CDS
T09958
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135444429 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zle01009
]
135444429 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135444429 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
zle03029
]
135444429 (RB1CC1)
Protein phosphatases and associated proteins [BR:
zle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135444429 (RB1CC1)
Membrane trafficking [BR:
zle04131
]
Autophagy
Autophagosome formation proteins
ULK complex
135444429 (RB1CC1)
Mitochondrial biogenesis [BR:
zle03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
135444429 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
135444429
NCBI-ProteinID:
XP_064562163
LinkDB
All DBs
Position
2:complement(113439289..113508989)
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKYAIQTKYKIAIQHQVLVVSGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTNSYQKLLYKFENVYSSYLQ
SIDDIKLKLTHLGSAVSIMAKIPLLECLTRHSYRECLGRLESSPEHGGAESEETEDGKSP
ELVLYPDISKVNSKSMLASFCKSVEHSALEGTDPENVKDDKESGQNATVQDNEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRTES
ATGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENLVSPNVVSDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSVENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFKTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKTLNDKHQNELQSLKSEYESKINKLLEDGEESKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENEHRLEQMQESHEVVMKEKQQQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLRSQVDKETESLRKEIDKLNNKIQISSDEHQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELNKVTLLHQKTAEAEKRLSEQITELQSKLELEMTALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLISNQEQDRQLLIQKLNCEKEDAVQTACKELELQR
EAAEKGLLEKILQLEMQVNQSPPAQSSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSPSTYLAAASEACGACAADVPTDTERLVADFGTEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaatatgcaattcaaacaaagtataagattgccatt
cagcaccaagtactggttgtcagtggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacggccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacaa
cttgctgtggaaatgtatgaggttgccaagaagctttgctccttttgtgaaggtcttgta
cacgatgaacatctacagcatcaaggctgggctgctataatggccaatttggaggattgt
acaaactcttaccaaaagctgctttacaagtttgaaaatgtgtattcaagctatttgcag
tccatagatgatatcaaattgaaacttacacacttgggttctgctgtttctatcatggcc
aagataccactgctggagtgcctaacaagacatagttacagagagtgtttaggaaggctg
gagtcttcccctgaacatggaggagcagaaagtgaagaaacagaggatgggaaatctcct
gaattggtgctttatcctgatatatccaaagtgaacagtaaatcaatgttagcatcattt
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaagatgat
aaagaatctggtcaaaatgctactgtccaggacaatgaaatgtcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggcagaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaggatagactctatgcattggaccagatgatagcaagc
tgcagcagactggtgaatgaacaaaaggaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggaacttgcaaataatctgcaagtcagactgaagtggtgttgttttgta
atgcttcatgctgaccaagatggagagaaactgcaagcactgcttcgtcttgtaacagag
ctcctagaaagggtcaaagttgtggaggctctcagcactgttcctcagatgtactgttta
gctgttgttgaagttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctctaataaaagatgggaaacatctatatgaagctgaaaaggcgaaaagagaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgacagtgagcttccagatatctcg
ttgagtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgtacgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaactattacagacctgctgaatgag
caaaaggcctccaatagtcaagcatcgccacaatctgctaccacgccaaggacggaaagc
gctacaggaaccgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcctgtgtgtcccccagctccattggaagaattgtctccagacagcatt
gatgctcacacgttcgattttgaaactattgcccatccaaacttggagcaagctcttaag
caaggatcattagacttggattcattggcagagagcccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatctagtgtctcctaatgtcgtaagtgatccacaa
agcccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtagg
cgtatgcaagatacaagttcttgtgtaaaggatgtttcagtagaaaatgcttctctcagt
gtttgtgtggagaagtgtagagttattgcacaagactcaaaggtacatttaagaggtata
aaagaagatctttgccatttcaaaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacgattgaaaaggtaaagctttcactt
gaaaaaacgctaaatgataaacatcaaaatgaattacagtctttgaaaagtgagtatgaa
tctaaaattaacaaattactggaagatggtgaagaaagtaaaaagaaaatcaaaaagtta
aaaggtgacctgttaggtcttgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtggtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattctgaaatcaaggaactgaggcagtcacgt
gaaattgtacttgaagacttgaaaaaacttcatgttgaaaacaacgagaaactacagctc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggat
aagttaaaaaaagagaacgagcatagacttgagcaaatgcaggaatctcatgaggtagtt
atgaaagagaaacaacaacaagtagaagagttacaactgaaggtttcagatctgtctgat
ttgaggtgcaaactagaagttgaacttgccctgaaagaggcagaaactgatgaaatgaag
cttcttttggaagaaagcagaaaccagcaacaagagaccttaagatctcaggttgacaag
gaaactgaaagtttaagaaaggagatagataaattaaacaataaaatacaaatcagcagt
gatgaacatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttctgagctagtaaataggtatgaagaagaatcaaatttgcttagaactgagtta
aataaagtaacgcttcttcatcaaaaaactgctgaggcagaaaaaagactttcagagcaa
ataacagaactgcagagtaagttagagttggaaatgactgccctagagaaggaaaaaaca
gaaaaattgtctctctgtgagcagcaggaaaaatatgaagctattatccataagctaaag
gaagagaaagaactgttaatatctaaccaagagcaagacaggcaattgctcattcagaag
ctcaattgtgaaaaagaagatgcagtacaaactgcttgtaaagagttggaattacagagg
gaagctgctgaaaaaggacttttggaaaaaatactgcaacttgagatgcaagtgaatcag
agtcctcctgctcaatcatctgctgaatcaaacttagtcgctgaacttcaggagaagctt
caggaagaaaaaatgaagttcttagagcaacttgaagaacaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcactcactgcagagcagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagagaaagataaggatttgattgaaacactttctgaagataga
gctcgcttacttgaagagaagaagaaacttgaagaagaagttaataaactgagaagtagt
aatttttctccatcaacctacttggcagcagcatcagaagcttgtggagcctgtgcagct
gatgtgcccacagacacagagagattggttgctgactttgggactgaggggagaatggat
tccacaatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagaggataatgttgctagaaagaactttgcagttgaaagaagaggaaaataagagatta
aatcaaagattgatgtctcaaagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggttggcgatttggtactcataatcttggatgaaaggcatgac
aactacgtgttgtttactgttagtccaaccttatatttcttgcactcagagtcccttgct
gcactggatctcaaaccaggtgagtgtgcatcgggtgcatctaggagaccgtgggtgcta
ggaaaagtgatggaaaaggagtattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacaaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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