Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444458
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Entry
135444458 CDS
T09958
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135444458 (CHD7)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135444458 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
135444458
NCBI-ProteinID:
XP_064562208
LinkDB
All DBs
Position
2:116387119..116520595
Genome browser
AA seq
3013 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENTVNPMGQQMPMDQGFPTLQSSLHHPPAN
QNQAKLTHFDHYNQYEQQKMHLMDQPNRMISNAPGNGIASPHSQYHNPPVPQVPHSSGAG
GQMGVYPGMQNERHGQPFVDSGSMWGPRAVQVPDQIRAPYQQQQQQQQPQPTQPPQAPSG
PPGQGHPQHMQQMGNYMARGDFSMQQHGQPQQQRMNQFSQGQEGLNQGNPFIATSGPGHL
SHVPQQNPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLNFSSR
SQTVPSPTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPS
NSGQGLMHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRP
GSAGIPMEVGSYPNIPHPQPSHQPPGAMGIGQRNMGPRNMQQNRPFMGMSSTPREMGGHM
RPNGCPGVGLADPQAIQERLISGQQLPSQQQSFQQQMPTCPPMQPHPGIHHQSSPPPHPH
HQPWAQLHQSPQNTPQKVPVLQHSPSEPFLEKPVPDMTQVSGPNTQLVKSDDYLPSIEPQ
PQQKKKKKKNNHIAAEGPSKGFGKEDFPGGLDSQNLSRNSVDCSQEDKKKKKKPKAKKEP
KDPKEPKEKKEPKTPKVPKTPKEPKEKKAKNTTPKPKTSKKASSKKQDSEANAAKKKVNK
GKEGSENSDLEKTPPPSPHPEDEDDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADA
AGRDSPSNTSQSEQQESADAEGPIVEKIMSSRLVKKKTENGEEVEVEEFYVKYKNFSYLH
CQWASVEELDKDKRIQQKIKRFKAKQGQNKFLSEIDDELFNPDYVEVDRIMDFSRSTDDN
GEPVTHYLVKWCSLPYEDSTWELKQDIDQAKIEEFEKLMSREPEMERVERPPADDWKKSE
SSREYKNNNKLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLYEIYLKGIHG
PFLVIAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKF
HAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPL
QNTVEELFSLLHFLEPGRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKN
LAPKEETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYL
INGAEEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVR
CLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTA
ADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKA
VLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHT
ITIESEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPR
VRKQTRLYSAVKEDELMEFSDLESDSEEKPSTKPRRPQDKSQGYARSECFRVEKNLLVYG
WGRWTDILSHGRYKRQLTEQDVETICRTILVYCLNHYKGDENIKSFIWDLITPTADGQTR
ALVNHSGLSAPVPRGRKGKKVKAQSSQPMLQDADWLTTCNPDVLFQEDSYRKHLKHHCNK
VLLRVRMLYYLRQEVIGDQADKILEGADSSEVDVWIPEPFHAEVPADWWDKEADKSLLIG
VFKHGYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEY
KPTRTPFKDEIDEFANSPPEDKEESIELHPSKHSESNAELGQLYWPNTSTLTTRLRRLIT
AYQRSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIITEKRQKWTRREEADFYRVV
STFGVIFDPVKHQFEWNQFRAFARLDKKSDESLEKYFNGFVNMCRRVCRMPVKPDDEPPD
LSTLIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGKHDK
DLLIGAAKHGVSRTDYHILNDPELSFLEAHKNFAQNRGTGNANTVSSVNPLGAGCSQTPP
VVPSTPVQEEKTTEPTESKAEGSENPAAKEKTEIKEETDTTDKDTKPDCDAEAEPDSVKC
ELKDIEMSTEVDPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSQGKNFDEESNASM
STARDETRDGFYMEDGDPSVVQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNR
RQMFDFQGLIPGYTPTVVDSPLQKRSFAELSMVGQASVSGSEDLTASPQLSKEDALNLSV
PRQRRRRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREATSSTS
NFSSVTSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLIDGEPPMKRRRGRR
KNVEGLDLLFMSNKRTSLTVEDAEVTKAFEEDMEALPARNIPSPGQLDPDTRIPVINLED
GTRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKSADVLFSPFQKPKQKRHRCRNPNKL
DINTLTGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVP
ESMFDRLLTGPVVREEGASRRGRRPKSEIAKAAAAAAAVASTSGINPLLMNSLFAGMDLT
SLQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAMLPLMLPGMAGLPNMFGLSGLL
NNPITATTGNATTASGQGETEDGASKAEEKKNENEEENKDSEKSTDTVSATDSANGSVSA
ATAATTATATTTTTTNTGLPTNPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPAL
AGLQNAVGSNEEKATDKTEGAAFKDEENLEGSDAEESLDKTADSSVLEDEIAQGEELDSL
DGGEEIENNENDE
NT seq
9042 nt
NT seq
+upstream
nt +downstream
nt
atggcagatccaggaatgatgagtctgtttggagaagatgggaatattttcagtgaaggg
ttggaaggccttggagaatgtggatatcctgaaaatacagtgaatcctatgggtcagcaa
atgcccatggatcaaggatttcccactttacagtcatctcttcatcatcctcctgcaaat
caaaaccaagccaagttgacccattttgatcactataatcaatacgaacagcagaaaatg
cacctgatggatcagccgaacaggatgataagcaatgcccctgggaatggtatcgcgtct
cctcattcgcagtatcacaaccctccagttcctcaggttcctcacagcagcggtgccggt
ggtcagatgggagtctatcccggcatgcagaacgaaagacatggccagcccttcgtagac
agtggctccatgtggggaccacgggcagttcaagtgccagaccagataagagcaccatac
cagcagcaacagcagcagcagcagccgcaacccacacagccaccacaggcaccctccgga
ccccctgggcagggccatcctcagcacatgcagcagatgggaaactacatggctcgtggt
gatttttcaatgcagcagcacggtcagccgcagcagcagaggatgaaccagttttctcaa
ggccaagaaggcctcaatcagggaaaccctttcattgccacctcaggacctggccacttg
tctcatgtgccccagcagaatcccagtatggcaccttctttgcgacactcagtccagcaa
tttcaccaccatccccctactgctctccatggggaatcagtagcccacagtcccagattc
tcccctaatcctccccagcagggtgctgttaggccgcaaacacttaattttagttctcgg
agccagacggtaccctcacctactataaacaactcagggcagtattctcgatatccttac
agtaaccttaatcagggattagttaataatacagggatgaatcagaatttaggccttaca
aataacactccaatgaatcaatctgtaccaagatacccaaatgctgtcggatttccatca
aacagtggtcaaggactaatgcaccagcagcccatccaccctagtggctcacttaaccaa
atgaacacgcaaactatgcacccttcacagcctcagggaacttatgcctctccacctccc
atgtcacctatgaaagcaatgagtaatccagcaggtacacctcctccacaggttagaccc
ggtagtgctggaataccaatggaagttggcagttacccaaatataccccatcctcagccg
tcacaccagccccctggtgccatgggaattggacaaaggaatatgggccccagaaacatg
caacagaatcgtccatttatgggtatgtcttcgacaccacgggagatgggtgggcacatg
agaccaaatggttgtccaggtgttggccttgcagatccacaagcaatacaagagcgacta
atatctggccagcagcttcctagtcaacagcagtcttttcaacagcaaatgccaacctgt
cctcccatgcagcctcatccagggatacatcaccagtcttcaccacccccacatcctcat
catcagccttgggcacagcttcaccagtcaccacaaaacacaccacaaaaagtgcctgtc
cttcagcattctccgtcggaaccctttttagagaaaccagtgccggatatgactcaggtt
agtggaccgaatacccagctagtgaaaagcgatgattatctgccatcaattgagccgcag
ccacagcaaaagaaaaagaaaaagaaaaacaatcacattgctgcagaaggtcccagtaaa
ggttttggtaaggaagactttcctgggggacttgacagccagaatctaagcagaaactca
gtggattgctcccaagaagacaagaagaaaaagaaaaagcccaaggcaaaaaaagaaccg
aaggatcctaaagaacccaaggaaaagaaggaacccaagacccccaaagtccctaagacc
cctaaagagccaaaggaaaagaaagcaaaaaataccacgccaaaacccaagaccagcaaa
aaggctagtagcaagaagcaagattcagaagccaatgctgcgaagaaaaaggttaacaag
ggaaaggaaggttctgaaaactcagatttggaaaaaactccaccaccatcacctcatccc
gaagatgaagatgatccaggggttcagaaacgacgctccagcaggcaggtgaagaggaag
cgttatactgaagacctggagttcaagatttcagatgaggaggctgatgatgctgatgct
gctggaagagactctccttcaaatacttctcagtcagagcaacaggaatctgctgatgct
gaaggtcctattgtggagaaaatcatgagtagccgtttagtcaagaaaaagacggagaac
ggagaggaagtagaagtagaggagttctatgtaaagtataaaaacttttcttaccttcac
tgtcagtgggcatctgtggaagagctggacaaagacaagagaattcagcagaagattaag
cggtttaaggcaaaacagggccagaataaattcctttctgaaattgatgatgaacttttt
aatccagattatgtggaagttgatcgaatcatggatttttcacgtagcacagatgataat
ggagagcctgtcacgcattatctggtgaagtggtgttcgcttccttacgaggacagcact
tgggagctcaagcaagacatcgaccaagccaagatcgaagaatttgagaaactgatgtct
agggagccagaaatggagcgtgtggagcgacctcctgccgatgactggaagaaatcggag
agttccagggagtataaaaacaataacaaactcagggaataccagttggagggagtaaac
tggcttcttttcaattggtacaacacacgaaactgcattttagcagatgaaatggggttg
ggaaagactatccagtccattacgtttctctatgagatatatttgaaaggaatccatggt
cctttcttggttattgcaccattgtccacaattcccaactgggaaagggagttccgcacc
tggacagagttgaatgtggttgtgtatcatgggagtcaggcgagccggcggaccattcag
ttgtatgaaatgtatttcaaagatccacagggtcgtgtgataaaggggtcctacaagttc
catgccattatcacaacatttgaaatgatcttgactgactgcccagagctgcgtaacatt
ccatggcgttgcgtggtcattgatgaggcccacaggctgaaaaacaggaactgtaagctt
ttggaaggactcaagatgatggatctggagcataaagtgctgcttactggaacccctttg
caaaacacagtagaagagctgtttagcttgcttcacttcttggaaccaggtcgctttcca
tcagaaaccacattcatgcaagaatttggggatcttaaaactgaagagcaggtgcaaaaa
ctgcaagctattttgaagccgatgatgctgagacgtctcaaagaggatgtggaaaagaac
ctggcccccaaagaggaaaccatcattgaagttgagctgacaaatattcagaagaaatac
tatcgtgctattcttgaaaagaatttcacatttctttccaagggcggaggtcaggcaaat
gtacctaatcttttaaacactatgatggaactaagaaaatgctgcaatcatccatacctt
attaatggtgctgaagagaaaattttggaagagtttaaagaaacacacaatgccgactct
ccagattttcagctccaggcaatgatccaggctgctggcaagctcgtactgattgacaag
ctgctgccaaaactgaaggctggtggccacagggtgcttatcttttcccagatggtgcgc
tgcttggacatactggaagactacctcattcaaagacggtacccgtacgaacgaattgat
ggtcgagtgagaggcaacttgcgtcaggcagctattgacaggttttcaagacctgattct
gataggtttgttttcctgctgtgtacaagggcaggaggtttgggcattaatcttactgct
gctgatacctgcatcatttttgattcagactggaatccccaaaatgacctccaggctcaa
gcacgatgtcacagaatagggcagagcaaatcagtgaaaatttacaggttgataacaagg
aattcttatgaaagggaaatgtttgacaaagctagcctgaagctgggccttgataaggct
gtgctacaatctatgagcggaagagaaaatgccacaaatggggtgcaacagctgtctaaa
aaagaaatagaagatcttcttcgaaagggggcatatggtgctctgatggatgaggaagat
gaggggtctaagttttgtgaagaggatattgatcagattctgttaaggagaacacacaca
attactattgaatctgaaggaaaaggctcaacatttgcaaaggctagttttgttgcatct
gggaacaggacagatatttctttggatgaccctaatttctggcagaagtgggcaaagaaa
gctgagctggatatcgatgctctaaatggaaggaacaacctagttattgatacaccaaga
gtaaggaagcaaaccagactctacagtgcagtcaaagaggatgagctgatggagttttca
gacctggaaagtgattctgaggaaaagcctagcacaaagccccgtaggcctcaggacaaa
tcacaaggttatgcaagaagtgaatgtttcagggtggagaagaacttgttggtttatggc
tggggtcggtggactgacatcctctcacatgggcgctataaacgtcagctaacagagcaa
gatgtggaaaccatctgccggactatcctggtgtattgtcttaatcattacaaaggggat
gaaaatatcaaaagtttcatctgggatctgatcactccaactgcagatgggcaaactcga
gctttggttaatcattccggtctgtctgcaccagtgcccagggggaggaaagggaagaaa
gtaaaagcccagagttcacagccaatgctccaagatgctgattggctcacaacctgtaat
ccagatgtattatttcaagaagacagctataggaaacatcttaaacatcactgtaataag
gtcctgctgcgtgtccgcatgctctactatctacgacaagaagttataggggaccaagca
gacaagatcttagagggtgctgactcaagtgaagtagatgtatggatacctgagccattc
catgccgaagttcctgcagactggtgggataaggaggcagataaatcccttttaattgga
gtatttaaacatggttatgagaagtacaattccatgagagctgatccagcactgtgcttt
ctggaacgggttggcatgcctgatgcaaaggccatagctgctgaacagagagggacagac
atgttagcagatggcggtgatgggggtgaatttgacagagaggatgaagatccagaatat
aagccaaccagaactcctttcaaggatgaaattgatgaattcgcaaactcacctccagaa
gacaaagaggagtccatagaattacacccaagcaagcacagtgaaagcaatgctgagtta
gggcaactctactggcccaacacttcaaccctgactacccgtctgcgtcgcctcattact
gcctatcagcgcagctataaaaggcaacaaatgaggcaagaggcactaatgaagactgac
cgcaggagacgtcggcctcgagaagaagtgagggcactggaggcagaaagggaagccata
ataactgagaaacgacaaaaatggacaagaagagaagaagcagatttttatcgtgtggtg
tctacttttggagttatttttgatcctgtaaaacatcagtttgagtggaatcaattcaga
gcatttgccaggcttgacaaaaagtccgatgaaagcttggaaaagtattttaatggcttt
gtgaatatgtgtagacgagtgtgccgaatgccagtcaaaccagatgatgagcctcctgat
ctttccacgctgattgagccgatcacagaggagcgtgcttctagaactttatatcgcatc
gagctgctgcgcaagatccgcgaacaggtcctccatcacccgcagctgggggagaggcta
aagctttgccagccaagtctggacctgccagagtggtgggagtgtggtaaacatgataaa
gacttactgattggtgctgctaaacatggagtcagtaggacagattatcacattctgaat
gatcctgaactctcttttcttgaggctcacaaaaactttgctcaaaacagagggacgggt
aatgcaaatactgtgtcttctgtaaaccctctgggtgctggctgcagtcaaacaccccca
gtcgtcccatccacaccagtacaagaggaaaagactacagaaccaacagagtctaaagct
gaagggtctgaaaatccagcagccaaagaaaaaactgaaattaaagaggagacagatact
acagataaggacactaaaccagactgtgatgctgaggctgagcctgactctgttaaatgt
gaattgaaagacatagaaatgagtacagaggtagatccaaaatctatttctgagaaaggt
tcagaagaagatgaagaggagaaactggaagatgatgataaatcagaagaatcctcccaa
cctgaagcaggagcagtttctcagggtaagaattttgatgaagaaagcaatgcctctatg
agtaccgcaagggatgaaacacgcgatggattctacatggaagacggggatccctctgtg
gttcagctgcttcatgagagaacatttgccttctcattctggcctaaggaccgagtaatg
atcaaccgattagacaacatctgtgaggcagtgctgaaagggaagtggccagtaaatagg
cgccagatgtttgatttccaggggctcatacctgggtacactccaactgttgtggacagc
cctctacagaaaaggagctttgcagagctctccatggttggtcaagccagtgtcagtggc
agcgaagatctcactgcttctcctcagttatcaaaggaagatgcactcaatttatcagtt
ccacgtcagaggaggaggagacgaagaaagattgaaattgaggctgagagagctgccaag
aggagaaatcttatggaaatggttgcccagttacgtgagtctcaggtggtctcggaaaat
ggacaagaaaaggttgtagatttatcaaaggcctcacgagaggcaacaagttctacctca
aatttttcatctgttacttcaaagtttatcttgcctaatgtctccacacctgtgtctgat
gcctttaaaactcaaatggagctgctgcaagcaggtctttcacgcacacccacaaggcat
ctactaaatggctctttaatagatggagaaccacccatgaagaggaggagaggaaggagg
aaaaatgtagaagggcttgatctgttatttatgagcaacaaacggacatcactgactgta
gaggatgcagaagtgaccaaagcttttgaagaagatatggaagccctaccagcaaggaac
attccatctcctggtcaattagacccagacactcgcatccctgtaatcaatctagaggat
gggaccaggctggtgggagaggatgccccgaaaaacaaggatctggttgaatggcttaag
ttgcatcctacttacactgtagatatgccaagttatgtaccaaagagtgcagatgtgctg
ttttccccatttcagaagccgaaacaaaaacgacacagatgtcgaaaccccaataaactg
gatataaacaccttgacaggagaagaaagggtacctgttgtaaataaacgaaatggaaag
aagatgggtggagctatggcccctccaatgaaggacttgccaagatggctggaagaaaat
cctgagtttgctgttgctccagattggactgacattgttaaacagtctggttttgttcca
gagtccatgtttgaccgtcttctcactggacctgttgtgagggaggaaggagcaagcaga
agaggaagaaggccaaaaagtgaaattgccaaagcagctgcagcagctgctgctgtagca
tcaacttcgggaatcaacccactactaatgaacagtctgtttgctggaatggacctcaca
agcctccagaacctacagaacctgcagtctctccagctcgcaggcctcatgggctttcca
ccagggctagcaacagctgctgctgctgggggggacgctaaaaatccggctgccatgttg
cctctgatgttgccagggatggcaggactgcccaatatgtttggactaagcggattgttg
aataacccgatcacggctactactggaaatgccactactgcttctggtcaaggagagact
gaggatggcgcttcaaaagctgaagagaagaaaaatgagaatgaagaggagaacaaagac
tctgagaaaagcacagacactgtttctgctactgactctgcgaatggatctgtcagtgct
gctactgcggcgactaccgccactgccaccactaccaccaccaccaacactggattgccc
acaaaccctctggccttcaatcctttcctgctgtctaccatggctcctggcctcttctat
ccatctatgtttctacctccaggactgggaggattgactctgcccggtttcccagcacta
gcaggacttcagaacgcagtgggctccaatgaagagaaggctactgacaaaactgaagga
gctgcctttaaagatgaagaaaatctcgaaggcagtgatgcagaggagagccttgataaa
actgcagattcctccgttttagaagatgaaatagcacagggtgaagaattagactcactt
gatgggggggaagaaatagaaaacaatgaaaacgatgaataa
DBGET
integrated database retrieval system
