Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444542
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Entry
135444542 CDS
T09958
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zle03009
]
135444542 (DCAF13)
04121 Ubiquitin system [BR:
zle04121
]
135444542 (DCAF13)
Ribosome biogenesis [BR:
zle03009
]
Eukaryotic type
90S particles
Other 90S particles
135444542 (DCAF13)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
135444542 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_IFT122_1st
ANAPC4_WD40
eIF2A
KNTC1_N
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
135444542
NCBI-ProteinID:
XP_064562455
LinkDB
All DBs
Position
2:complement(128668233..128693891)
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AA seq
445 aa
AA seq
DB search
MRVKVLSRNPDDYVRETKLDLQRVPRNYDPALHPFEVAREYTRALNATKLERVFAKPFLS
SLDGHRDGVNCMAKHPKSLSTVLSGACDGEVKIWNLTKRQCIRTIQAHEGFVRGMCARFC
GTSFFTVGDDKTIKQWKMESPEYGEEEEPIHTILGKTVYTGIDHHWKEPVFATCGHQVDI
WDEQRTSPKCSLTWGFDSISSVKFNPIETYLLGSCASDRNIVLYDMRKSTPLKKVILNMR
TNTLCWNPMEAFNFTAANEDYNLYTFDMRFLESPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKGHSREVYHTKRMQHVITVKWTSDNKYILCGSDEMNIRLWKANASEKL
GVLAPREKAAMNYNQKLKEKFQFHPQIRRIAQHRHLPKSIYCQIREQRIMREARRRKELN
RRKHSKPGSVPLVPERKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgaaggtgctgagccgcaaccccgatgactacgtgagggagaccaagctggac
ctgcagcgcgttccaaggaactatgaccctgcattgcatccatttgaggttgcacgagag
tacacaagagctctgaatgccacaaagctggaacgtgtgtttgcaaaaccctttcttagt
tcacttgatggccacagagatggcgttaattgcatggccaaacatccaaaaagtttgtct
actgtgctgtctggagcctgtgatggagaggttaagatttggaacttgaccaaacgacag
tgtatccgcacgatacaagcccacgaaggctttgttcgaggcatgtgtgcccgtttctgt
ggcacatcgttcttcactgttggtgatgacaaaaccataaaacagtggaaaatggagagc
ccagaatatggagaagaagaagaacctattcatacaattcttggaaagacagtgtataca
ggaattgatcaccactggaaggagcctgtttttgctacctgtggccatcaagtggacatt
tgggatgaacaaaggacaagccccaagtgttctctgacttggggttttgatagcataagc
agtgtaaaatttaatcccattgagacttaccttttgggaagctgtgcttctgacagaaat
attgtgctgtatgatatgagaaaatcaactccattaaagaaggttatcttgaacatgagg
acaaatacactgtgttggaaccctatggaagctttcaattttactgcagccaatgaagat
tacaacttatatacttttgatatgcgctttcttgaatcacctgtgatggtgcacatggat
cacgtgtctgctgtccttgatgtggattattcaccaactgggaaagaatttgtgtctgcc
agctttgacaagtccatccgcatttttcctgtagacaaaggccacagcagggaggtttat
cataccaaacgaatgcagcacgtcatcactgtaaaatggacttcagataacaaatacatt
ctgtgtggctcagatgagatgaatattcgcctgtggaaagctaatgcctctgaaaaactg
ggagtgcttgcaccccgagagaaggcagccatgaattacaatcagaagctgaaggagaag
ttccagttccacccgcagatccggcgcattgctcagcaccggcacctgcccaagagcatc
tactgccagatcagggagcagcgcatcatgagggaggctcggcgccgcaaggaactgaat
cgtcgtaagcacagcaagccaggatccgtgcccctcgtgccagagaggaagaagcatatt
gtggcagtagtgaaataa
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