Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444585
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Entry
135444585 CDS
T09958
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135444585
Cell adhesion molecules [BR:
zle04515
]
Cadherins
Cadherin related
135444585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
EGF
Cadherin_CELSR2_9th
Cadherin_pro
hEGF
EGF_2
Laminin_G_3
Y_Y_Y
EGF_Teneurin
PSV_trans_reg_dom
Motif
Other DBs
NCBI-GeneID:
135444585
NCBI-ProteinID:
XP_064562557
LinkDB
All DBs
Position
2:complement(131988613..132043004)
Genome browser
AA seq
2509 aa
AA seq
DB search
MYPYPYLARVDPDARKGALVYQLTARCSSPENASAAVTYALTAGGDERFRVDKDTGMIMT
TGLPLTWNKEYVVTVEASDEQGNRSPYASVSILAGSRPPQFTNMSYSVFVPENTPAGEKV
AVVEAVSFQSQPLSYTLLTNPSGLFRVRQESGELSLTHPVDYESEHHLYHLLLKAMEVES
TLSSVTEVMVHITDENDCSPEFQRSIYSRDNVPETIPVGTSLLQVLATDCDSGSNSEISY
FIQSTDFSITRHGVVNSNQRLNFERANHMYEFVVIAVDRGHPPRTGTASVRIRMANVNDE
APVFSQALYRTFLSEDAGPGTLVATVRAEDPDGDGLLYLITGGNEEGNFELDSQKGIIKL
RRNPPPSLKGPQYTLNVTAIDDNASGGPTPLSSFAEVIVGINDVNNNKPVFRECAYYSDS
TWVLENQPPGTRVLQVEAYDADLGINGEVKYGLMHRDGASLGFSIDPDTGVITTTQSFDR
EQQREHTLSVTATDRAREPLIGVCQLTVLIADLNDNEPKFENSRYQYFLSEDTPVGTSFL
RVAAHDSDQGVNAAVTYSMLEHQLEYFQINPSTGWVYVNCPLPQTMRISRYIVATDGGNR
SSTVELTVTVTSALSQPPQWEQSSYWVTIPENTIRDTRIVTIKATSPLGDPRVTYNLEEG
QVPETNMPVRFYLKPNRADGSASLLVAEPLDFETTKFFTLTVRAQNVAMTPLASFATVCV
NITDVNDNVPFFMSSNYEASVPEGADIGTSVVQVLAMDLDSGLHGEVHYLILKDANEDYQ
FFTIEPETGIIYTQASFDREKRASYLIEVQSQDLSESARPGVYGQPNTDTAYVRIFVSDV
NDNAPAFPQSVYEVSMDEDREVGSPVVTATADDEDEGANAKLRYQITSGNVKGVFDVEPE
IGTVFIAQPLDYEQEQHYELRLVASDGKWENHTLIIINVVNKNDEAPVFTQNEYQGSVLE
ELTDLPVLVLKVSATDPDQAADQAAISYSLHGQGAGSEFSIDESTGEISAHTRLDREKRS
TWRFLVLATDEGGEGLTGFADVVIEVRDVNDNAPLFLCVLDGCFTGHIPEGSPADTPIME
MTAVDLDDPKAGINAVLTYSIIQNVKNEINLNLFSIDSVSGTISTVLGSLDREKEDKYLV
VVEARDGGGLTGTGTATIFVTDVNDHAPVFLQRIYTAFVSENASINTEVAVVSAVDRDEG
ENAMVTFSIVDGDNDRKFSIETDEVNNCGFIRLRKRVDFEKPHERVFNLTVKAEDMDFFS
IAHCVIYVEDSNDHAPLFYPQFYEVAALGEDVPVGTKIIQVSAVDLDSGLNGRFSFHLLN
KSDPGGQFSLASDGWLMVAGLLDYETVAQYQLIVIATDMGQPPLTGSATVLVTLQDVNDN
GPEFEAHYNPVVWENTASPQVVQMNETSTLLYAKDRDTAVNGAPFSFRLLGDLDSLTSFS
LQDLHNGSAVLTALRTFDREVHKAFHLPILITDSGIPPMSSTNTLTVNIGDQNDHPHSAG
YMECLIYSYDGILPTTVLGQVSAPDADDWDRKIYQFEGKTSRYFILNDNSGLLTIKEGTP
PGTYNIRVRVIDGVWPDVISTVKVIVKEIKDDALRNAGSVRITGITPEEFISQSPEKQSK
YYQMKKLLSEIISVQLENVHIFSVLNSPSPIRGVDVWFAVYGPPYYKAEKLNGNVAASRA
WLESILDINITQTGIDECVTAECTHSSGCVTKHEQNHVPTITTAGSVSLVSVTVLSHAVC
GCAARENPHLSCSSYQTNPCLNGGTCVDTDLGYRCKCAANFHGPDCQQTKHSFRGHGYAW
FPPLQPCFESRISLDFITEVADGLLLYHGPAARGQPGEQENFLALELSGGVPSLTVSHSS
GELFLQLSQKVNVADRRWHNIKIINDGKEVKLILDNCMNVSVRDNGSVTKKISQMDLSAC
EASGEIVGSQSSGKLFSGHQPLQLGGVKQTLPYPDSQRHFRGFVGCIRNVIVDSKVYDLE
HPAESLNSAPGCVLMDEMCQSGGMASCGTHGKCVDGWDFFHCDCSPGYAGLACEKVLPEW
AFGRDSWIHYEPRSTRSTRSTRVQLLVRTRISHSTLLSLASADGNGHIRLEVVEGFFSVN
FSLGDNTHSLRMRTLRINNGQWVLLTMERYNNEFTLRVNSGGGDQEVTSVLGVNRWFEMD
WASIVLGNRLPSHSENDFQGCMRDVRLDGQPLLVEGRSTEFGLILRRQGVTMGCHSSACS
SQPCYSPFLCVDLWRKYECRCPAGKVEVTDTLTGLRHCTSSPCGHWTCRNGGTCVAQSQD
KTICQCPEGYKGRWCEISQVKAARPVGLSSGSILAISMCLLVFLALLVSYTVWSQWGSSG
FRKGGIYHIPEERESWEDVRENVFNYNEEGGGERDQNAYNIDELKKPLHKTPCSSLRAAA
PHSRTPAGPKRDSLPKHAHQKQSISAVTSIPDFKEYVSQIVRDADNDLKSLPADTIHFYC
LEGQCSLAGSLSSLDSISGDEDLNYDCLQEWGSKFEKLKELYSVSNENL
NT seq
7530 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgtacccgtacctggcgcgcgtcgaccccgatgcgcgcaaaggcgcgctcgtc
taccagctcacggcgcgttgcagcagccctgagaacgcctctgctgccgtaacctacgct
ctcactgcaggtggtgacgagcgattccgagtggataaggacactggcatgatcatgacc
actggtctgcctctgacgtggaacaaggagtacgtggtgaccgtggaagcctctgatgag
cagggcaaccgaagcccctatgcctccgtttccatcctggccggctcccgccctccgcag
ttcactaacatgtcctacagcgtgtttgtccctgaaaacactccagcaggagaaaaagta
gcagttgttgaggctgtttctttccagagccagcctctttcctacactctcctgaccaac
ccctctgggctgttccgggtgaggcaagagagtggagagctcagcctgacccaccccgtg
gactacgagagcgagcaccacctctaccacctccttctgaaagccatggaagttgagagc
actctcagcagtgtgactgaggtcatggtccatatcaccgatgaaaacgactgttcccct
gagttccagcgctccatttacagcagagacaatgttcccgaaaccattcccgttggcaca
tctcttctgcaagtgcttgcaactgactgcgactctggctccaactctgagatctcttac
ttcatccagagcactgatttttccatcacacgtcacggggtcgtcaattctaaccagagg
ctgaactttgagcgagccaaccacatgtacgagtttgtggtgatcgctgtggacagagga
cacccccctcgcacggggacggcgtctgtgcgcatccgcatggccaacgtcaatgacgag
gctcccgtcttctcccaggccctttacaggaccttcctttcggaagatgctggtcccggc
accttggtggcgactgttcgggcagaggaccctgatggggacgggctgctctatctgatt
acagggggcaatgaggagggcaactttgagctggatagccagaaaggtatcattaaactc
cgcagaaacccaccacccagcctgaaagggccacagtacaccttgaatgtcactgccata
gatgacaatgcctcggggggacccactcctctgagcagttttgctgaggttattgtagga
attaatgacgttaataacaacaagcctgtctttagagagtgcgcttactacagtgacagc
acctgggttctggagaaccagcctccaggcacgcgtgtgctgcaggtggaagcctatgat
gcagaccttggcatcaatggagaggtgaagtatgggctcatgcaccgagatggagcttcc
cttggcttcagcattgatccagacacaggagtcatcaccaccacgcagagttttgaccgg
gagcagcagcgggagcacactctgtctgtcactgccacggaccgggcgcgggagccgctg
atcggcgtgtgccagctcaccgtgctcatcgccgacctcaacgacaacgagcccaagttt
gagaacagccgctaccagtacttcctcagcgaagacactccagtggggacgagtttcctc
cgagttgcagctcacgacagtgaccagggtgtgaatgctgctgtcacatactcaatgcta
gagcatcagctggaatacttccagatcaaccccagcacaggctgggtgtacgtgaattgc
ccactaccccagacaatgcgcatcagccgctatattgtagccacagacggcgggaacaga
agcagcacggtggagctgacggtgactgtcaccagtgcactgagccagcccccacagtgg
gaacagagctcttactgggtcaccatccccgaaaacaccattcgtgacaccaggattgtg
accatcaaagccacatcccctcttggtgatcccagggtcacgtataacctggaggagggt
caagttccagagactaacatgccagttcgtttctatctgaagccaaacagagctgatgga
tctgcttctcttctagtcgctgaaccacttgactttgagactactaagtttttcaccctg
acagtccgggcacaaaatgtagcaatgactcctttagcttcctttgccactgtgtgtgtg
aatataacagatgtcaatgacaatgttccattcttcatgtcctctaactacgaggcgtct
gtgccagaaggagcagatattggcacgtctgtggttcaggtgttagctatggacttggat
tctggcctgcatggagaggttcactacttaatattaaaagatgctaatgaggattatcag
ttcttcaccattgaacctgagacaggaattatttacacccaggcatcttttgacagagag
aaaagagcctcttacttgattgaagttcagtctcaggacttatcagaatctgctagacct
ggtgtttatgggcagcccaacacagacacagcctacgtgaggatttttgtcagtgatgtg
aacgacaacgccccggcatttcctcagtcagtgtatgaggtcagcatggatgaggacagg
gaggtggggagtcctgttgtgacagcaacagcagatgatgaagatgagggtgcaaatgcc
aaactaaggtatcagatcacttcaggaaatgttaaaggggtttttgatgtggaacctgag
attggaactgtcttcattgctcagcctctggattatgaacaagaacaacattatgagctc
cggcttgtagcttctgatggaaaatgggaaaaccacactcttatcatcatcaatgttgtc
aataagaatgatgaagcaccagtcttcactcagaatgaataccagggcagtgtcttagag
gagctcactgatctgccagtacttgtcctaaaggtttctgcaacagatcccgaccaagca
gcagatcaagctgccattagctactccctgcacgggcagggagccggcagcgaattcagc
atcgacgagagcacaggtgagatcagcgcacacaccaggctggaccgggagaagcgatcc
acgtggcgcttcctcgttctcgccacggatgagggcggagagggcctgactggctttgca
gacgtggtcatagaagtgagggacgtgaacgacaacgcgccccttttcctctgtgtgttg
gatggctgtttcacaggccacatccctgagggctctccagctgacactcctatcatggaa
atgacagcagtggacctcgatgaccccaaggctggtataaatgctgtgctaacatacagt
atcattcagaacgtcaaaaacgaaattaatttgaacttgttctcaattgattcagttagt
ggcaccatctctacagtgcttgggtccctggaccgtgagaaggaagacaaatacctggtg
gtggttgaggccagagatggaggagggctcactgggacaggcactgccactatttttgtg
actgacgtgaatgatcatgctccagtcttcctgcaaaggatttacacagcatttgtctcc
gagaatgcgagtattaacactgaggtggcagtggtgtctgctgtggacagagacgaggga
gaaaatgccatggtgacattcagcattgttgatggggacaatgaccgcaagttctccata
gagacagatgaagtcaacaactgtgggtttatccgactacgcaaacgggttgactttgag
aagcctcatgagagggtattcaacttgactgtgaaagcagaggacatggatttcttcagc
attgctcactgtgtgatctatgtggaggactcaaatgatcatgcccctctcttctatccc
cagttctatgaagtggctgcacttggggaagatgtaccagttggcaccaaaattattcag
gtttctgctgttgacttggattctggcctgaatgggaggttttctttccacctgctaaac
aagtctgatccaggtggccagttctctttggctagtgatgggtggctgatggttgcagga
ttgctggattatgagacggtggctcagtaccaactcattgtgattgccactgatatggga
cagccccctctgaccggcagtgccactgttttggtgactctgcaggatgtaaatgacaat
gggccagagttcgaggcacattataacccagtggtctgggaaaacacagcttctccacag
gttgtccaaatgaatgagacctccacactgctgtatgccaaggaccgggacactgctgtg
aacggagcccctttctcctttcgcctcctcggggatctggatagcctgaccagcttcagc
ctgcaggacctccacaacggcagcgccgtgctcaccgccctgcgcacctttgacagggag
gtgcacaaggcgttccacctgcccatcctgatcacagacagcgggatcccgcccatgagc
tccaccaacacgctgaccgtcaacattggggaccaaaatgaccacccgcattctgctggc
tacatggagtgtctcatttacagctatgatggtattcttcccacgactgtactgggccag
gtcagtgcccctgatgctgatgactgggatcgcaaaatctaccaatttgaagggaaaaca
tcaaggtactttatccttaatgataactcaggtttgctgactattaaagaaggaaccccc
ccaggaacatacaacataagagttagagtcattgatggagtctggccagatgttatctcc
actgtaaaggttatagtgaaggaaatcaaggatgacgccctccgtaacgctggttctgta
cgaataacaggtatcacaccagaggagttcatatcccagtcccctgaaaaacaaagtaaa
tactaccagatgaagaagctgctttcagaaattatctcagttcaactggaaaatgttcac
attttcagtgtactgaatagcccgagtccaatccgaggggttgatgtttggtttgcagtt
tatggcccaccttattataaagcagaaaaacttaatggcaatgtagcagcttccagagcc
tggctggaaagcattctggacataaatatcacccagactggcattgatgagtgtgtgact
gcagagtgcactcacagcagcggatgcgtcactaagcatgaacagaaccatgtaccaacc
ataaccacagctggaagtgtttcactggtgtctgtgacagtcctgagccatgctgtgtgt
ggctgtgctgctcgggagaatcctcatctttcctgctcctcataccagacaaacccttgt
ctcaatggtggcacatgtgtggatactgatttgggatacagatgcaaatgtgctgcaaat
tttcatggaccagactgccagcagacaaaacacagcttcagaggccatggttacgcctgg
ttccctcctcttcagccctgctttgagagccgcatctccttagactttatcactgaagtt
gctgatggccttctgttgtaccatggaccagcggcacgagggcagcctggagaacaggaa
aacttccttgccttagaactctctggtggcgtcccatcgctgactgtgagccacagctct
ggtgagcttttcctgcagctgtcacaaaaagttaatgttgcagatcgccgctggcacaat
attaaaattataaatgatggaaaggaagtgaagctgattcttgacaactgtatgaatgtc
tcagttagagacaatggcagtgtcactaagaagatttcccaaatggatctgtctgcctgt
gaagcctctggagagattgtgggatctcagagcagtggaaagctcttcagtggccatcag
cccctgcagctggggggagttaagcagaccttgccttaccctgactcccaaaggcacttc
agagggtttgtgggctgcatacgcaacgtcatcgttgacagtaaggtctatgatttagag
caccctgcagagtccctgaacagtgctccaggctgtgtccttatggatgaaatgtgtcag
agtggtgggatggcctcctgtggcacccatggcaagtgtgttgatggctgggatttcttc
cactgtgactgttccccaggatatgctggactagcatgtgaaaaagttcttccagagtgg
gcgttcggaagggacagctggatccattacgagccaaggagcacccgcagcacgcgcagc
acgcgggtgcagctgctggtgcgcacccgcatctcccacagcaccctgctcagcctggcc
tctgccgacggcaacggccacatccgactggaggtggttgagggtttctttagtgttaat
ttcagtttgggggacaacacccactctttgagaatgagaacattacgtataaacaatggc
cagtgggttcttctgaccatggagcgctacaacaatgaatttaccctgcgcgttaatagt
ggcggaggggatcaggaagtcacctctgtcttgggtgtgaatagatggtttgaaatggat
tgggcaagcatcgtgctaggaaaccgccttcccagtcattcagagaatgatttccaaggc
tgtatgcgcgatgtccggctggacggacagccgctcctcgtggagggcaggagcacagag
ttcggactgattctgaggcggcaaggggtcaccatgggctgccactccagtgcctgcagc
agccagccctgttacagccccttcctttgtgtagacctttggagaaaatacgagtgccgg
tgcccagctgggaaagtagaagtgactgacacccttacagggctcagacactgtacctca
tccccttgtggacactggacctgtaggaatgggggtacctgtgtggctcagtcccaagac
aagactatctgccagtgccctgaaggttacaagggaagatggtgtgaaattagccaggtg
aaggctgcaagacctgttggactaagctctggctctattctggcaatcagcatgtgcctc
cttgtcttcctagcactcttggtttcctacacagtgtggagtcagtggggaagttcaggg
tttcggaaaggaggaatttaccacattcctgaagagcgtgaaagctgggaggatgttaga
gaaaatgtcttcaattataatgaagaaggaggtggagaacgtgaccagaatgcttacaat
atagatgaactgaagaaacctctccataaaactccctgctcctccttgcgagcagctgct
ccacactccaggacaccagctggcccaaaaagagactcactccccaaacatgcacatcaa
aagcaatcaatatcagctgtgaccagcatcccagacttcaaggaatatgtttctcaaatc
gtacgggatgcagacaatgatctaaagagtcttccagctgacactattcatttttactgc
ttggaagggcaatgctctctagcagggagccttagctcattagattccatcagtggggat
gaagatctgaattacgattgcctccaagagtgggggtcaaagtttgagaagcttaaagaa
ctctattcagtctcaaatgaaaatttataa
DBGET
integrated database retrieval system
