Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444591
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Entry
135444591 CDS
T09958
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135444591 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135444591 (RAD54B)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
135444591 (RAD54B)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
Motif
Other DBs
NCBI-GeneID:
135444591
NCBI-ProteinID:
XP_064562565
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All DBs
Position
2:132243963..132307060
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AA seq
920 aa
AA seq
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MRRSAAPSQVLGNAGKKPRFTPPGKCTAVCLKNETKEMDQEIKLKEIDDKEGGASLLSKI
NIKNQNENSTQSVESTGKVKTKACFSINKCSKAEKKTLNVPKADAVYLPTSGTAKEEAAQ
EAPDCLVKYFSVVWCKASKKKHKKWEGDAILITKGKSVILKDMEGKDIGRGTGYKAKELD
SLDEGQTLMVGGKEIEVMGVISADDFNSGRCFQAGIGTHETDASALSQTSTKLFCKPFKN
VCQPSTKENMLRDSQSCKPRHDPNATNSLVMPRPNASHQWMFNKAGLPVVDVVVDPYIAS
NLRPHQREGIIFLYECVMGMRVSGRSGAILADEMGLGKTLQCIALVWTLLRQGPYGCRPV
LKRALVVTPGSLVKNWKKEFQKWLGSERIKVFTVDQDHKVEEFISSPLYSVMIISYEMLL
RSLDQIQAVEFNLLICDEGHRLKNSTIKTTTALTSLSCERRIILTGTPIQNDLQEFYALI
EFVNPGILGSLSTYRKIYEEPIVRSREPSATEEEKELGEKRAAELTRLTGLFILRRTQEV
INKFLPPKKESIIFCRPTALQLELYRKLLSSRVITSCLQGRLENSPHLICIGALKKLCNH
PCLLFKAIKQEKSCDPMSEQYDESSLYEGVIDVFPQDYTSDTFCETDSGKLQVLVKLLAA
IHELNSSERVVLVSNYTQTLNVLQDVCKHYGYSYTRLDGHTPVSQRQHIVDAFNSKFSPA
FIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKHAVHIYRLLTTGS
IEEKIYQRQISKQDLSGAVVDLSKTSEHTHFSIEELKNLFTLHEDSSCVTHDLLECDCMG
KVDHQNTSSEKPPVSRSCQLEQNHGKPNSKKPLSMSQLMQWKHFSGQHQTLADPFLERIK
ENVSFIFQNVTNPTSPPNKT
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatctgcagctcccagtcaagtcctaggaaatgctggcaaaaagccaaggttt
acaccaccaggaaaatgcactgctgtttgtctcaagaatgaaactaaggagatggaccaa
gaaattaagttaaaggagatagatgacaaagagggaggtgcttcattgctgtctaaaata
aatatcaagaatcaaaatgaaaattctacacagtctgtggagtcaactggaaaagtaaag
acaaaagcatgtttcagcattaacaagtgtagcaaggcagaaaagaaaacactaaatgtg
cccaaagctgatgcagtctatttgccaacctcagggactgcaaaggaagaagcagctcag
gaagcacctgactgccttgtgaaatatttcagtgtcgtgtggtgtaaggcatcaaagaaa
aagcacaagaagtgggaaggcgatgctattcttattacaaaaggaaagtcagtaatattg
aaagatatggaaggcaaagacattggcagaggtactggatataaagctaaagagttagac
agccttgatgaaggtcaaacactgatggttggcggaaaagaaattgaagtgatgggtgta
atttcagcagatgatttcaacagtggcaggtgttttcaggctggaatagggactcatgaa
acagatgcatctgcattatctcaaaccagtacaaaactattctgtaaaccattcaaaaat
gtctgtcaacccagtactaaagagaatatgctcagagattcccaaagctgcaaacctcgc
catgatccaaatgccacaaattctctggttatgccacgaccaaatgcaagtcatcagtgg
atgttcaataaggccggtttacctgtggtggatgtagttgtagatccttacattgcaagt
aatctccgcccacatcagagagaaggaattatatttctgtatgaatgtgtaatgggaatg
agagttagtggcaggtctggagctattctggctgatgagatgggcttgggcaaaaccctg
cagtgcattgcccttgtgtggactctgctgcgccaggggccctacggatgcagacctgtg
ctaaagcgagcactggtggtcacccctgggagtctggtgaaaaactggaaaaaagaattt
cagaaatggttgggaagcgaaaggatcaaagtctttacagttgatcaggaccacaaagta
gaagaattcatcagttctccactttattctgttatgataatcagttacgagatgctgttg
cgatctttggatcaaattcaggctgtagaatttaacctcctgatctgtgatgagggacat
cggctgaaaaacagcactattaagacaactacggcccttactagtctgtcttgtgagagg
agaattatccttactggtactccaatccaaaatgacttgcaagaattttatgcattaata
gagtttgtgaatccaggaatacttggttctttatccacgtatagaaagatatatgaggag
ccaattgtcagatctagagaaccttcagcaacagaggaggaaaaggaattaggagaaaaa
agagcagcagaactcacacgcctcactggactctttattctaagaagaacacaggaggtt
attaacaaatttctgccccccaaaaaggagagcataatcttctgccgaccaacagcgctg
caacttgaattgtatcgaaaactgcttagttctcgtgtcattacatcctgtctgcaaggc
aggctggaaaacagtccccacctaatatgtataggagctctgaaaaaactttgcaatcat
ccatgtcttctgtttaaagctataaagcaggaaaaaagctgtgatcctatgtctgagcaa
tacgatgagtccagcctctatgaaggtgtaatagatgtcttcccacaagattatacttca
gacactttctgtgaaactgattcaggaaaattgcaggtgctggtgaagttgttggcagca
atccatgagctcaactcttctgaaagagttgtgttggtatccaattacactcagacatta
aatgtattacaagatgtatgcaaacattatggatactcctataccagactggatggccat
actcctgtctcccagagacaacatattgtggatgctttcaatagcaaattcagcccagct
ttcatctttttgctaagttcaaaggctggtggagtgggactgaacctggttggagcatct
catttgatcctatatgatattgactggaatccagctacagatattcaggcaatggctaga
gtgtggagagatggtcagaaacatgctgtccatatctacaggctgctaaccacaggttca
atagaagaaaagatttatcaaagacagatcagcaaacaagacctttcgggggcagttgta
gacctttccaagacatctgagcatacacatttttctattgaagagcttaaaaatctcttt
actctacatgaagattccagctgtgttactcatgacttgcttgagtgtgactgtatggga
aaggttgaccatcaaaatacttcctcagaaaagcctcctgtatctagaagctgccagctt
gaacaaaaccatgggaagcctaattcaaagaagccgctttccatgtcacagctgatgcaa
tggaagcatttctctgggcaacatcagactcttgctgatcctttccttgaaaggataaaa
gaaaatgtttctttcattttccagaatgtaaccaatcctacttccccacctaataaaact
tga
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