Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444601
Help
Entry
135444601 CDS
T09958
Symbol
USP9X
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135444601 (USP9X)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135444601 (USP9X)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135444601 (USP9X)
Peptidases and inhibitors [BR:
zle01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135444601 (USP9X)
Ubiquitin system [BR:
zle04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135444601 (USP9X)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
135444601
NCBI-ProteinID:
XP_064562598
LinkDB
All DBs
Position
1:complement(8262407..8365186)
Genome browser
AA seq
2552 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDGQSQPPLQQNQTSSPDSSNENSPATPPDEQGQADAPPQL
EDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNP
HCKFHLYNGTRPSETVPAGVQLAEDELYARPPDPRSPKGWLVDLINKFGTLNGFQVLHDR
FMSGSALNVQIIAALIKPFGQCFEFLTLHTVKKYFLPIIEMVPQFLENLTDDELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHALVTLVAENLSAYMESMRQYAKEHGEYDPQTVRPGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLDYLWRVVIQ
GNDDIANRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHITLVVRFPNQGRQVE
DLDIWSHTNDTIGQVRRCILNRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQINSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPPLRDGARVLMKLMPPDNTTVEKLRAICLDHAKLGESSLSPSLDSLF
FGPSASQVLYLTEVVYALLMPASAPLGEDASDFQYNFLKSGGLPLVLSMLTRNNFLPNAD
METRRGAYLNALKIAKLLLTAIGYGHVRAVAEACQPVVEGTSTISPINQATHDQAVVLQN
ALQNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIRAVQKIVWASGCGSVQLVFSS
NEEISKIYEKTNAGNEPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKAWQTFIIDLL
LHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFITLLFTVLGSTARERAKHSGDYFTLLR
HLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEVKRTGETGVEETILEGHLGVTKELLAF
QTPEKKYHIGCEKGGANLIKELIDDFIFPASNVYLQYMRNGELPAEQAIPVCSSPATINA
GFELLVALAVGCVRNLKQIVDTLTEMYYIGTAITTCEALTEWEYLPPVGPRPPKGFVGLK
NAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSDVDDDMSGDEKQDNESNVDPRDDVFGY
PHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNL
REQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPHRYECEESFTTL
NVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRF
DYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQIIQNEQSENEHSGST
KYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECKMDDDEEMKNQCF
GGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDTIDKDNELIKYISEIAITTKPHQI
KMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEEIT
MISIQLAARFLFTTGFHTKKIVRGPASDWYDALCILLRHSKNVRFWFAHNVLFNVSNRFS
EYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCQSPFASPGPSSQAYDNLSLSDHLLRAVL
NLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQ
YAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPLANPYGDPNLSQPIMALQQNVADILFV
RTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLL
QILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSNCPVA
YQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPIQSNETSNGYFLERSH
SARMTLAKACELCPEEEPDDPDAPDEHESSPPEDAPLYPHSPGSQYQQNNHVHGQPYTGP
AAHHMNNPQRTGQRAQENFEGSEEVSPPQTKD
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgactcgtggctctccggtaggagggaatgacagccagggccaggctcct
gatggacagtcccagcctcccctccagcagaatcagacttcttcacctgattcttcaaat
gagaactcgccagctaccccgcctgatgagcagggccaagctgatgctccaccccagctt
gaagatgaggagcctgcatttccacacacagacctggcaaagttggatgacatgatcaac
aggcctcgatgggttgttcctgtattgccgaagggggaattagaagttcttctagaagct
gctattgacctaagtaaaaaaggccttgatgtcaaaagtgaagcatgccagcgatttttt
cgagatgggttaacaatatccttcacaaaaatccttacagacgaggcagtgagcggctgg
aagtttgaaattcatagatgtattattaacaacactcatagactagtggaactctgtgtg
gccaagctgtcccaagattggtttccccttcttgaacttcttgccatggccttaaatcct
cactgcaaattccacctctacaatggtactcgtccctcagaaacagttcctgcaggagtc
cagctcgctgaagatgaactttatgcccgtcctcctgacccacgatccccaaagggttgg
ctagtagatcttatcaacaagtttggcacattaaatggatttcaggtcttgcatgatcga
ttcatgagtggatcagcattgaatgttcagatcattgcagctctcatcaagccatttgga
caatgttttgaatttttaacattacatacagtgaagaaatacttccttccaattatagaa
atggttccacagtttttagaaaatttaacagatgatgaactgaaaaaagaagcaaagaat
gaagccaaaaatgatgctctgtcaatgataatcaaatctctaaagaacttagcttcaaga
gttccaggacaagaagaaactgtaaaaaatttagaaatatttaggttaaaaatgattctt
aggttgttacaaatttcctctttcaatggtaaaatgaatgcactaaatgaagttaacaaa
gtaatatccagtgtgtcatactacactcatcgacatggtaatcctgaagaggaagagtgg
ctcacagctgaaagaatggcagaatggatccagcagaacaacattttatcaattgtatta
agagatagtcttcatcaacctcaatatgtagaaaaacttgagaaaattctccggtttgtc
atcaaagagaaagctctcactttgcaggatcttgacaacatttgggctgcacaggcagga
aaacatgaagccattgtaaaaaatgtacatgatctccttgcaaaattagcttgggatttc
tctcctgaacagcttgatcacctgtttgattgttttaaggcaagttggacaaatgccagc
aagaaacagcgtgagaagctgctggagttaattcgtcgccttgcagaggatgacaaggat
ggagtgatggcacacaaagtgctgaaccttttgtggaatttggctcacagtgatgatgtg
ccggttgatatcatggaccaggctctcagtgcccatataaaaatcttagattacagctgt
tcacaggatcgagacacacagaagatccagtggatagatcgctttatagaagagcttcgc
acaaatgacaaatgggtcattcctgccctgaaacaaattagagaaatttgcagtttgttt
ggtgaagcaccacagaacttgagtcaaactcagagaagtccccacgtgttttaccgacat
gacttaatcaatcaacttcagcacaatcacgccctcgtcacactggttgcagaaaacctc
tctgcctatatggaaagcatgaggcagtatgctaaagagcatggtgagtatgatcctcag
actgtgagaccaggaagccgctacagccacgtgcaggaggtgcaggagcgactgaacttc
ttacgatttttattgaaggatggtcagctgtggctctgtgcccctcaggcgaagcagata
tggaagtgtttagcagaaaatgcggtttatctttgtgatcgcgaagcctgttttaaatgg
tattccaaactaatgggggatgaaccagacttagaccctgacattaataaggacttcttt
gaaaataatgtgcttcagctggatccttccctattaacagaaaatggaatgaaatgtttt
gaacgtttcttcaaagctgtgaactgtcgagaaggaaagcttgtagcaaagagacgagcc
tatatgatggatgacctggaattaataggattagactacctttggagggttgtgattcag
ggaaatgatgacattgcaaaccgagcaatagaccttcttaaagagatctataccaatctt
ggcccaaggttacaagttaatcaggtagtgattcatgaagacttcattcagtcctgtttc
gaccgtctaaaagcctcctatgatactttatgtgtgttggatggagacaaagacagcatc
aactgtgcaagacaagaagcaataaggatggtgagagtgctgactgttttaagggagtat
ataaatgagtgtgacagtgattaccacgaagagagaactattctacctatgtcaagggct
ttccgtggtaaacatatcacacttgtggttcgttttccaaaccaaggccggcaggtggaa
gatttggatatttggtctcacacgaacgacaccattggccaagtgcggcgctgcatcctc
aatcgcattaaagccaacagcgcacacacaaaagtagagctgttcattgggggtgagctg
gtggatcctgcagatgacagaaagttaattgggcagctgaatctcaaggataaaacgcta
attacagctaagcttacacagataaattctaatatgccctcaagtccagatagttcttct
gattcttcaactggttctccgggcaaccacggcaatcactacagcgatggtccaaatcca
gaagttgaaagctgtttgcctggagtgatcatgtcactgcatcctcgatacatctctttt
ctttggcaagttgcagacttgggcagtagtctaaatatgccacctcttagagatggagct
cgtgttcttatgaagctcatgccaccagataacactacggtcgagaaactaagagcaatt
tgtttagatcatgcaaagcttggggaaagcagccttagtccatcccttgattctctgttc
tttggtccttctgcctcacaagtgctgtacctaacagaggtagtttatgccttgttaatg
cctgccagtgcacctctgggagaagatgccagtgacttccagtacaacttcctgaaaagt
ggtggtttgcctcttgtcctgagcatgctgaccagaaataacttcctgccaaatgcagat
atggaaactcgaaggggtgcctaccttaatgctctaaaaatagccaaattattgctaaca
gcaattggatatggccatgttcgagctgtggcagaagcttgtcagccagttgtggaaggc
acgagtacaatttcaccgataaaccaggctacgcatgaccaggcagtggtgctacaaaat
gccctacaaaacattcctaatccaacttcagaatgcatgctgagaaatgtagcaatacgt
cttgcacagcaaatatctgatgaggcgtcaaaatacatccctgacatctgtgttatcagg
gcagtgcaaaaaattgtttgggcatcaggttgtggatcagttcagctggttttcagctcg
aatgaggaaattagtaaaatctatgaaaagacaaatgcaggaaatgaaccagacatggaa
gatgaacaagtttgctgtgaagccctggaggtgatgaccctgtgctttgctttgattcca
acagccctggatgcactcagcaaagagaaggcgtggcagacatttattattgatttactg
ttgcactgtcacagcaaaactgttcgtcagatggcacaggagcaattctttttaatggct
accaggtgttgcatgggacagagacctctccttttcttcattaccctgctgtttactgtt
ctagggagcactgcaagagagagagctaagcattctggagactacttcaccctcttaagg
catcttcttaactatgcttacaacagtaatattaatgtacccaatgctgaagtgcttctc
aataatgaaattgactggcttaagagaatcagggatgaagtaaaaagaacaggggaaaca
ggtgttgaagaaacgatcttagagggtcaccttggagtaacaaaagagttgttagcattc
cagacacctgagaagaaataccatattggttgtgaaaaaggaggtgctaatctcattaag
gagttgatagatgatttcatctttccagcatccaatgtttatctacaatacatgagaaat
ggagaattgcctgctgagcaggccataccagtgtgtagctcaccagccactattaatgct
ggctttgagctcctcgttgcactagcagttggatgtgtgcgaaatctcaagcagattgta
gacacgttgactgaaatgtattacataggtacagcaatcactacttgtgaagcactcaca
gaatgggaatatctgccacctgttgggcctcggcctccaaagggatttgtgggactgaaa
aatgctggtgccacttgttacatgaactctgtcattcagcagctgtacatgattccagcc
atcaggaatggcattcttgcaatagaaggcacaggcagtgatgtagatgatgacatgtct
ggggatgaaaagcaggacaatgagagcaatgttgacccacgagatgacgtgtttggttat
ccacatcagtatgaagataaaccagcactgagcaaaactgaagatagaaaagagtacaat
attggagttttgaggcatctccaagtaatttttggccatttagcagcttccaggctacag
tactatgtaccaagagggttttggaaacagttcagactctggggtgaacctgtaaatcta
cgtgaacaacacgatgctttagaattttttaattcattggtggacagtttagatgaagct
ttaaaagctttgggccatccagcaatgttaagtaaagttttaggagggtcctttgctgat
cagaagatttgtcaaggatgcccacatcggtacgagtgtgaggaatccttcacaactctg
aatgtagatataaggaatcaccaaaaccttcttgattctttggagcagtacgtcaaagga
gatttattggaaggtgcaaatgcatatcattgtgaaaaatgcaacaaaaaggtggataca
gtgaaacgtttgttgattaagaagttgcctccagttcttgccatccagttgaaacgattt
gattatgactgggaaagggaatgtgcaatcaaattcaatgattattttgaatttccacga
gaactggacatggagccttacacagtggcaggtgtagcaaaattggaaggggatgatgtg
aaccctgaaaatcagataatacaaaatgagcagtcggaaaatgaacactctgggagcaca
aaatacagacttgtgggggtacttgtgcacagcggccaggccagcggcggacattactac
tcctacatcatccagaggaacggtggagatggtgagaagaaccggtggtacaagtttgat
gatggagatgtgacagagtgtaaaatggatgatgatgaagagatgaaaaatcaatgcttt
gggggagagtacatgggcgaggtgtttgatcacatgatgaagagaatgtcctacaggcgc
cagaagaggtggtggaatgcttacattcttttttatgaacgcatggacacgatagacaaa
gacaatgaactcataaaatatatttcagaaatcgctatcaccactaaaccccaccagatt
aaaatgccctcggccatcgagcggagcgtgcgcaagcagaacgtgcagttcatgcacaac
cggatgcagtacagcctggagtatttccagttcataaagaagttgctgacttgtaatagt
gtctacctgaaccctcctccaggacaagatcatctgttgcctgaagcagaagaaataact
atgattagtattcagcttgctgctagatttctcttcaccacaggatttcatacaaagaaa
atagtccgtggccctgctagtgattggtatgatgccctgtgcatcctgctccggcacagc
aagaatgtacgattctggtttgcacacaacgtcctgtttaatgtttcaaaccgcttctcg
gagtatctcctggaatgccccagtgcagaagtgaggggtgcatttgcaaaacttatagta
tttattgcacatttttcattgcaagacggaccatgtcaatcaccttttgcctctcctgga
ccttccagtcaggcttacgataacttaagtttaagtgatcacttactgagggcggtactg
aatctcctgcggagggaggtatccgagcacgggcgccacttgcagcagtatttcaatctg
tttgtgatgtatgccaatctaggtgtagcagagaagacacaacttctgaaactaaatgtt
cctgcaaccttcatgcttgtggctctggatgaaggtccaggccctccaattaagtaccag
tatgctgagctggggaagctgtacaccgtggtgtcccagctgatccgctgctgcaacgtc
tcctcgaggatgcagtcttctatcaatggtaatcccccacttgccaacccttatggtgat
cctaatttatctcaacctataatggcacttcagcagaatgtagcagacattctgtttgtg
agaactagttatgtaaagaaaattattgaagactgcagcaactctgaagagaccatcaag
ttgcttcgtttctgctgttgggagaatcctcagttctcttccacagtcctcagtgagcta
ctttggcaggttgcctattcatacacatacgagcttcgaccttatttggatctgcttctg
caaatcctgttaattgaggactcttggcaaactcacaggattcacaatgcacttaaggga
atcccagatgacagggatggactctttgacaccattcagcgctcgaagaatcattatcag
aaaagagcttaccagtgtataaagtgcatggtggctctcttcagcaactgccctgtagct
taccagatccttcagagcaacggagatttgaagaggaaatggacctgggcagtggagtgg
cttggagacgagctggagcgtagaccatacactggcaatccccagtacacctacaataac
tggtctccaccaatccagagcaatgaaacatcaaatggctacttcctagagaggtcacac
agtgctagaatgactcttgcaaaggcctgtgaactctgcccagaggaggaaccagatgat
cctgatgccccagatgaacatgagtcttctccacctgaagatgccccactgtatccccat
tcacctggttcccagtatcaacagaataaccacgtgcatggacagccatatacgggcccg
gcagcacaccatatgaacaaccctcagcgaaccggccaacgagcacaagaaaacttcgaa
ggcagtgaagaagtgtccccgcctcagacaaaagattag
DBGET
integrated database retrieval system
