Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444727
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Entry
135444727 CDS
T09958
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135444727 (SCRIB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
LRR_8
LRR_14
LRR_4
PDZ_2
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
135444727
NCBI-ProteinID:
XP_064562886
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All DBs
Position
2:complement(152817529..152951980)
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AA seq
1824 aa
AA seq
DB search
MLRCMPPLWRCNRHVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLL
NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR
LPEGFTQLRSLGHLALNDVSLQSLPTDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQL
DLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEV
SGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLSELILTEN
MLTALPKSLGKLAKLTNLNVDRNRLTALPAEIGGCANLNVLSLRDNRLALLPPELANTTE
LHVLDVAGNRLQNLPFALTNLNLKALWLAENQSQPMLKFQTEDDEKTGEKVLTCYLLPQQ
PSPSLENLLQNSVDESWTDSNLNRVSVIQFLDEPKGDEDEESGAERRGLQRRATPHPSEL
KVMKKVIEVRRSEVNAAKADANPSSPNSEEKRLSATSNRSEDSHLSASTASVEGRPEDRD
RGWPNGQLPDLHRELHKDSKPRAQEEHKEPADHEEEDVEVEYNEPTVHFAEDTLIRSEDE
DEDEERPFPVEKQRLIRKDTPHYKKHFKITKLPKPEAVVALLQGLNSDGVPKEEEELGGC
NNNTEPRDQEEAWDEEDRKNGALSAQPSVKGVSFDQANNLLIEPARIEEEELTLTIVRQT
GGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVSLHCAEHHV
AVEALRGSGSSVSMTVLRERMVEPENAITVTPLRPEDDYSPRERRGGLRFPEGPEAAAER
FSTCLMRNEKGLGFSIAGGKGSTPYRAGDTGIFISRIADGGAAHRDGILRVGDRVISING
VDMTEARHDQAVALLTAASPTIVLLVEREARAEEQPGEGGSPRARMHSPPPGPGDSLSLP
EDAARNHLLSKGLEDQYPIEEIHLVKAGGPLGLSIVGGSDHSSHPFGIHEPGVFISKVIP
RGLAARSGLRVGDRILEVNGTDLRHATHQEAVNALLCNSQELSMLVRRDPPPPGMQEICI
EKAPGEKLGISIRGGAKGHAGNPFDPTDEGIFISKVSSSGAAARDGRLQVGMRILEVNHQ
SLLGMTHTEAVQVLRAVGDALLVLVCDGFDPRAAAAIEMSPGIIANPFAAGIGRKNSLES
ISSIDRDLSPEELEILQKEMEMVREATQWEREEVEKVERMRREREAATQQLEEEAENVPS
EPLRLDYRTLAALPSSGLQRGNRAAPVGESGAGNSRRESPYSPSNPQASINFITSQDDSK
SQTKPGVIQPLSRVRPSAAVALRAEEGDSPNPFQQPQPCFRTHSSPKPSPPSPPSPDEVP
INVKQAYKTFAAVPLSQPLLGTQELSGQSSTENTKMALEVAAHSPGGQHSPEQRSFRERQ
KYFEIEVKQQHLDRPPKRVSLVGEDDLKKMKEEEARKLQQQRALLLEEEAEEEEEEGRRA
PQAMQSSVIIEGVEYKVERLNGRSSQAPAARPLELSESSSSQRNSLEEGIKPEHRTNSMS
GLSPAEPGAPVRTAKAERRHQERLRMQSPELLAQQDKELSPAERRALEAEKRAMWRAARC
STLEDSVKQYEQDLARRLYQSRQRAAAAAAPGQSQPSRATPGAGGGQSRMKSLEQDALKA
QMVIAKSKEGRKRSPLEQLAESPSPAPTPSPTPMEDCSPRNVTSPGRLSMSEKKFDYREF
AAIPSSKPVYEIQSPDAADDLRHVDECSNSVPREQDGQPEEEEEALAAGDPSAAAPSALE
DMALYSSKRKLRHSRRSLETAVPT
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgctgcatgccgccgctctggcgctgcaaccggcacgtggaggcgctggaccgg
cggcactgctcgctgcaggccgtgcccgaggagatctaccgctacagccgctcgctggag
gagctgctgctggacgccaaccagctccgggagctgcccaagcctttcttcaggctcctg
aacctgcgcaagctgggcctgagcgacaatgagatccagaggctgccccccgaggtggcc
aacttcatgcagctggtggagctggacatctcccgcaacgacattccagaaattcctgaa
agcatcaagttctgcaaatccctggaaatcgcagacttcagtgggaatcctctctccagg
ctgcccgagggcttcacccagctccggagcctgggccacctggccctgaacgatgtgtcc
ctgcagagcctccccactgacattgggaatttggcaaacctggtgactttggagctgcgt
gagaacctgctaaagactctccccacctccctctccttccttgtcaagttagagcagttg
gatctcggtggcaatgacctggaagtgctgccggacactctgggcgcgctcccgaacctg
cgcgagctgtggctggaccggaaccagctctcggccctgccaccggagctgggcaacctg
cgccgcctggtgtgcctggacgtgtctgagaacaagctggagcagctgcccaacgaggtc
agcgggctggtggccctgacggacctgctgctgtcacagaacctgctggaatgcattccc
gatgggatcggtcagctgaagcagctctccatcctcaaggtggaccagaacaggctgaca
gacatgacagagtcgattggggactgtgagaacctctctgagctcatcctgactgagaac
atgctgacggccttgcccaagtccctgggcaagctggccaagctgaccaacctgaacgtg
gaccggaaccggctgacagcgctgccagcagagatcggaggctgtgccaacctcaacgtg
ctgtccctgcgcgacaaccgcctggcactgctgccccccgagctggccaacaccaccgag
ctgcacgtgctggacgtggctggcaacaggctgcagaacttgccctttgctttgacaaat
cttaatctgaaggccctgtggctggcagaaaaccagtcccagcccatgctgaagttccag
accgaggatgatgagaagacaggagaaaaggttctcacttgctacctgctcccccagcag
ccctctcccagcctggagaacctgctgcagaacagcgtggatgagagctggacagacagc
aacttgaacagagtcagtgtgatccagttcctggatgagcccaaaggggatgaggatgag
gagtctggagccgagagacggggcctgcagcgcagagccacccctcaccccagcgagctg
aaggtgatgaagaaggtgatcgaggtgcggcgcagcgaggtgaacgctgccaaggctgat
gccaaccccagctcccccaactcggaggagaagaggctgagtgccacgtccaaccgcagc
gaggactcgcacctgtccgccagcacggcctctgtggagggcaggccagaggacagggac
aggggctggcccaacgggcagctgcccgacctgcacagggagctgcacaaggacagcaag
cccagggcccaggaggagcacaaggagcctgctgaccacgaggaggaagatgtggaagtg
gaatacaatgagcccaccgtgcacttcgccgaggacacgctgatccgcagcgaggatgag
gatgaggacgaagagcggccgttccccgtggagaagcagaggctcatccgcaaggacacg
ccccactacaagaaacacttcaagatcaccaagctgcccaagccagaggcagtggtggca
ctcctgcaggggctgaacagcgatggggtccccaaagaggaagaggagctgggaggctgc
aataataacacagagcccagggatcaggaggaagcgtgggatgaggaggacagaaagaat
ggagctctgtctgctcagccctccgtgaagggggtgtcgtttgatcaagccaataatctg
ctgattgaacctgctcgcattgaggaggaagagctgaccctgaccatcgtgcggcagacg
ggcgggctgggcatcagcatcgccgggggcaagggctccacgccctacaagggggatgac
gagggcatcttcatctcccgcgtgtccgaggagggtcctgcggctcgggcaggggtccgt
gttggtgacaagctcctggaggtgaacggcgtgtcgctgcactgtgccgagcaccacgtg
gcggtggaggcgctgcggggctcgggcagctcggtgtccatgacggtgctgcgggagcgg
atggtggagcccgagaacgccatcacggtgaccccgctgcggcccgaggacgactacagc
ccgcgggagcggcgcggggggctgcgcttccccgagggccccgaggcggccgccgagcgc
ttctccacctgcctcatgcgcaacgagaaggggctgggcttcagcatcgccggcggcaag
ggctccacgccctaccgggctggggacacgggcatcttcatctcccggattgcagacggt
ggggccgcgcaccgggacgggatcctgcgcgtcggggacagagtcatctcgatcaatggg
gtagacatgacagaagccaggcatgatcaggccgtagcgctgcttaccgcggcctccccc
accatcgtgctgctggtggagagagaggccagggcagaggagcagcccggcgaggggggc
tcgccccgcgcccgcatgcactccccgccaccgggacccggggacagcctgagcctgccc
gaggatgcagccaggaaccacctcctgagcaaggggctggaggaccagtaccccatcgag
gaaattcacctggtgaaggcagggggtcccctgggcctcagcatcgtcgggggcagtgac
cactccagccatccctttggcattcatgagcctggtgtcttcatctccaaggtgatcccg
cgggggctggcggcgcgcagcgggctccgcgtcggggacaggatcctggaggtgaatggc
actgacctgcgccacgccacgcaccaggaggccgtcaacgccctgctctgcaacagccag
gagctcagcatgctggtccgcagggacccccctccccctggcatgcaggaaatttgcatt
gaaaaggctccaggagagaagctgggcatcagcattcggggtggagccaagggccacgct
ggcaatccgtttgatcccactgatgaaggcatcttcatctccaaggtgagctcctcgggg
gcggcagcgcgggacgggcggctgcaggtggggatgaggatcctggaggtgaaccaccag
agcctgctgggcatgacgcacaccgaggccgtgcaggtgctgcgcgccgtgggcgacgcg
ctgctcgtgctggtgtgcgacggcttcgaccccagggcggctgcggccatcgagatgtcc
ccaggaatcattgccaacccttttgctgccggcatcgggcgcaagaacagcctggagagc
atctcctccatcgaccgggacctgagccccgaggagctggagatcctgcagaaggagatg
gaaatggtgagagaagccactcagtgggagagagaagaagtggagaaagtggagcggatg
cgtagggagcgggaggcggccacgcagcagcttgaggaggaagcagagaacgtccccagc
gagcccctgcgcctggactacagaaccctggcagctctgcccagcagtggcctgcagaga
ggcaaccgtgctgctcccgtgggcgagtctggtgcaggaaattccaggcgagaatccccc
tattctcccagcaatcctcaggcttccattaacttcatcacatcgcaggatgacagtaaa
tcacagaccaagcccggcgtcatccagccgctgtcccgcgtgcgaccgagcgctgctgtg
gcactcagggccgaggagggggacagccccaaccccttccagcagccccagccctgcttc
aggacccacagctctccaaagccatcgccaccgtcgccaccgtcccctgacgaggtgccc
atcaacgtcaagcaggcctacaagacctttgcagcagtgcccctgtcccagcccctgctg
gggacacaggaactgtctggtcagagcagcacagaaaacaccaaaatggccttggaggtg
gccgcccacagccccgggggccagcacagccctgagcagaggtccttccgggagaggcag
aagtattttgagattgaggtgaagcagcagcacctggacaggcctcccaagcgcgtgtcc
ctggtgggggaggacgacctgaagaagatgaaagaggaggaggcccgcaagctgcagcag
cagcgagccctgctgctggaggaggaagctgaggaggaggaggaggagggcaggcgggcg
ccccaggccatgcagtccagcgtcatcatcgagggcgtggagtacaaggtggagagactg
aatgggaggagcagccaggctccagcagctcggcccttggagctcagtgagagcagcagc
tcacagaggaattccctggaggagggcatcaagcctgagcacagaaccaactccatgtcg
gggttgtcccccgcggagcccggcgctcccgtgcgcacggccaaggcggagcggcggcac
caggagcggctgcggatgcagagccccgagctgctggcccagcaggacaaggagctgtcc
ccggccgagcgccgcgccctggaggccgagaaacgcgccatgtggagggcagcacgatgc
tcaacccttgaagacagtgttaagcagtacgagcaggacctggccaggaggctgtaccag
tccaggcagagagcagctgctgctgctgccccagggcagagccagccctcgagagccacc
cctggggcaggaggaggccaatccaggatgaagtccctggagcaggatgccctcaaggcc
cagatggtcattgccaagtccaaggagggcaggaagcgcagccccctggagcagctggca
gagtcgccgtcccccgcgcccacgccgtcacccacacccatggaagactgcagccccagg
aacgtcacctccccaggaaggctgtcaatgtctgaaaagaagtttgactaccgggaattt
gctgctattccttcctccaaacctgtttacgaaatccagtcccctgatgcagctgatgac
ctcaggcacgtggatgagtgcagtaactcagtgccccgggagcaggacgggcagccggag
gaggaggaggaggcgctggcagcaggggatccatcagcagcagctccctcagccctggag
gacatggccctgtacagcagcaagaggaagctccggcacagccggcgcagcctggagacc
gctgtgcccacatag
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integrated database retrieval system
