Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445016
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Entry
135445016 CDS
T09958
Symbol
PCARE
Name
(RefSeq) photoreceptor cilium actin regulator
KO
K24165
photoreceptor cilium actin regulator
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135445016 (PCARE)
04812 Cytoskeleton proteins [BR:
zle04812
]
135445016 (PCARE)
Cilium and associated proteins [BR:
zle03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135445016 (PCARE)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
135445016 (PCARE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
135445016
NCBI-ProteinID:
XP_064563125
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Position
3:93675914..93682975
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AA seq
1283 aa
AA seq
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MGCTPSRSETDSTAARIGLKALNKPKSVLPIDSRDKGIPLLVKGSSCYTIDEYGFQRKDY
LEEEEEDRLSELDKNDNVHLSSKAHSDSQISREDKKIERTATDAEVIMSELIESQKHITE
SIEIRKQTSCESEASAFVWDDRNESNAKQIPKKGKKKKTHKLAKQGQPNKSKEKSIVAPC
ETEKKVDFPELLVKAHQSAYAYLHPNLSKYETILHMANQATQTQLFLQQMISFLVLRFDE
INQLLEEIANDGENLLKDVGGNLAWPAEKDDLKEHPDLLQQLLQYTVNKMQLVSGMLASL
TSNALQETCSYLQSAASNLEGKLKAKQSFDEHLLRTVKLLEASTVGSSQSHGDDRTLCSE
DSGIGVDSESLKEFSALSQHGAQPGESCAHGHPSRKHAGTVKRVSMGTAAPHGCAPARHS
KDVFHPSVQSRETTSCQGGVAEGTSTTSQYASLSKSRSHSSLQSDSTQEGEHFKTCESTD
FPSDEDEDDDDDDEEESTLGEDDDSTSLSEMGKDGLPRSLSSPALTDSIQRQSIKRTENA
DTEEIILKMKDAISEKIKFVPAKSRRKEWIEDESGRAVLAKRPSTATGRQRRFGKQRRSR
SEESLRSQAEDPTLLELQRTQKELSKRLEMLYRKDRANNLESWKSRAAHYLQDDQVTSRP
SRKLKAGLSKNFSILPNQDKVPLFTSDENPVLLNEKRVKKPVIATVPTQETSGGKENEPP
GAQTLSASSCTPRQSVKKLIETFSPTDDLAKAKPLRSLGPIKCIRKFGLPVIPPTAPFQR
GLAPLNLKHRISPVEDTNTNDVSSSFPNAFLPAPPAELSKKDTKEETDEDTENLPPPPPE
MLMDTSSENLSEPEETARTEGSSSEDAKKTTKPELHAAKRSQVSPKMKASLQSIDLLPSK
NISGPSGVTNKGLRSTRPGEEKPHRYSLELNPTNVRIPSQEEILETQRKEAADLYKQTHK
IIPLQNPSGASTPLSSSSESKGPDPPAPSLPRQKHGSPDPLRSGDKGSLFTRRVSPARTA
PSSPTEKRLFSPPAHHRHSLHAFSSTQPSSPSVQKKPSPPSSPRVPSPPLQKKLPSPPAQ
RKPVSPPVGHRQGSPTAQRLAGSPAPFPSTPSPPASPSRSYRVPRAGLDAGDEHQLSSSK
RGSNVRSIFCPATSSLFEARAPVAPSKGPAEVGSQPEAAAQPQRSSLMLQQPGDRSRRLS
LSTSHPQPFVRRSFSDRRPGAQPHLPAPLTAGSEPALHQASSEKSPRKAGDSWNSSGAPE
SRDSSRSASHPELFVVGQGLQRD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcacaccttctcgcagtgagactgatagcactgctgcaagaattggtcttaag
gctttgaataaacccaaaagtgttctgccgattgattcgagagataaaggaatccctctg
ctggttaaaggttcatcttgctacactattgatgagtatgggtttcagaggaaggactac
ctggaagaagaggaggaggatagactgtcagagctggacaaaaatgataatgtgcactta
tcttccaaggctcattcagattcccagatttccagggaagacaagaaaatcgagaggaca
gccacagatgctgaagtcattatgtctgagctgattgagtctcaaaagcacatcactgag
tccatagagatcagaaagcaaacctcctgcgaatcagaagcatcggctttcgtctgggat
gacaggaatgaaagcaacgcaaagcaaatcccaaagaaaggaaagaagaagaaaactcat
aagctggcaaagcaaggtcaacccaacaaaagtaaagaaaagtccattgtggccccgtgt
gagacagagaagaaggtggacttcccagagctgctcgtcaaggctcaccagagtgcgtac
gcctacctacaccccaacctgtccaagtatgaaactatcctgcacatggccaaccaggcc
acccagactcagctcttcctgcagcagatgatcagcttcctcgtgcttcgcttcgatgaa
atcaaccagctcttggaagaaattgccaacgatggggaaaatcttctcaaggacgtaggt
gggaatctggcatggccggcggaaaaggacgatttgaaggagcaccctgatctcctgcaa
cagctactgcagtacacggtgaacaaaatgcagctggtgagtgggatgctggcctccctc
acgtccaacgccctgcaggagacgtgcagctacctgcagtctgctgcaagcaacctggaa
ggcaaactgaaggcaaagcagagctttgatgagcacctgctacggacggtaaagctgctc
gaagcctcaactgtggggtcctctcagtcccacggtgatgacagaactctctgttctgag
gacagtggcattggtgtggacagtgaatccctcaaagagttcagtgctctcagccagcat
ggagcacagccaggtgagtcctgtgcacatggacatccatcccgaaagcacgccgggacc
gtgaagcgtgtgagcatgggcaccgctgctccccatggctgtgctcctgcaaggcattct
aaggatgtgtttcatccatctgtgcaaagcagggaaacgacttcttgtcagggtggagta
gcagaaggcacgtctaccacgtcccagtatgcaagcttgagcaaaagccgttcccacagc
tccttgcagtctgattctactcaggaaggtgaacatttcaaaacctgtgaatcaacagat
tttccttcagatgaggatgaggatgatgacgatgatgatgaagaagagagcacactgggg
gaggatgatgacagcacaagtttatcagaaatggggaaggatggtctgccgaggtccctg
tcttcacctgcgctcactgatagcattcagaggcagtccatcaaaaggacagagaatgca
gatacagaagaaatcattttgaagatgaaagatgccatcagtgaaaaaatcaagttcgtc
ccagctaaatccaggcgtaaggagtggatagaggatgagagtggaagagccgttctagca
aagaggcccagcacagcaacaggcagacagagaaggtttgggaagcagcgacgctccagg
tcagaggagtccctcagaagccaggcagaggacccaactctcctagagcttcagaggact
caaaaagagctcagcaaaaggctggaaatgttgtacagaaaggatagagctaacaacctg
gagtcgtggaaatcaagagcagcacattatctgcaggatgatcaagttacgtctaggccc
tcccgcaagctgaaggcaggcctctcaaaaaatttcagcatcctgcccaaccaggataaa
gtccctttgttcacatctgatgaaaatcctgtcctgctgaatgaaaagagagtcaagaag
cctgtaatagctactgtgcctacccaggagacatcaggaggcaaagaaaatgagcctcct
ggagcacaaacgttgagtgccagcagctgtacccctcggcagtctgtcaaaaagctgatt
gaaaccttcagtcctactgatgatcttgcaaaagccaaacctctaagatccttaggacca
ataaagtgcatcagaaaatttggacttccagtcatcccacccaccgctccctttcagaga
ggcctggcacctttaaatcttaagcatcgcatttcgccagtagaagacacaaacaccaat
gatgtttcttctagctttccaaatgccttccttcctgcaccacctgcagaattaagcaag
aaggacacaaaggaagagactgatgaagacactgagaacctgccaccaccaccacctgaa
atgttaatggacacttcttctgaaaatttatccgagcctgaagaaactgcaagaacagaa
ggaagctcttcggaagatgccaaaaagaccaccaaaccagaactgcatgctgctaagaga
tcacaagtttccccaaaaatgaaagcttcccttcagtccatcgacttgctgccaagcaaa
aatatcagtggccccagtggggtgactaataaaggtctaaggagcaccaggccaggggaa
gagaaaccacaccggtactccctggagctgaacccaaccaacgtgcgcatccccagccag
gaggagattttggaaacccagaggaaagaggctgcggatttatacaagcaaacccataaa
atcattcctcttcagaaccccagtggggcttcaaccccactcagcagcagctcagagagc
aaggggcccgacccacctgctccatcattgccgcgccagaagcacggctctccggacccg
ctccggagcggcgacaagggctcgctgttcaccaggagggtctccccagcgagaactgct
ccctcttccccaactgagaaacggctcttcagccccccagcacaccacagacattctctg
cacgctttcagcagcacccagccaagctcacccagcgtgcagaagaaacccagtccccca
tccagccccagggtgcccagcccgcctctgcagaagaagctgccctctccaccagcacag
cgaaaaccagtcagccctcctgtggggcacaggcagggctcacccacagcacagcggctg
gcaggctcccctgctccattccccagcaccccctccccaccagcctccccatctcgctcc
tacagggtgcccagggctgggctggatgctggggacgagcaccagctctcctcctccaag
aggggcagcaatgtccgttccatattttgcccggccacctcttccttattcgaagccaga
gctccagtggcccccagcaagggccctgctgaggtgggcagccagcctgaggctgcagca
cagccccagaggagcagcctgatgctccagcagcccggggaccgcagcaggaggctgtcc
ctgagcaccagccacccacagcccttcgtcaggagaagcttctctgatcgccgcccaggg
gcccagcctcacctcccagctcccctgacagctggcagtgagcctgcacttcaccaggca
agctcggagaagagccctaggaaagcaggtgactcgtggaacagctctggggctcctgag
agcagagattccagcagatccgcttcccaccccgagctcttcgtcgtgggccaggggctg
cagagggactga
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