Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445143
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Entry
135445143 CDS
T09958
Symbol
ZC3H12D
Name
(RefSeq) probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135445143 (ZC3H12D)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
135445143 (ZC3H12D)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
zf-CCCH_4
zf-CCCH_2
zf-CCCH
PRORP
Motif
Other DBs
NCBI-GeneID:
135445143
NCBI-ProteinID:
XP_064563251
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All DBs
Position
3:complement(59646713..59658373)
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AA seq
681 aa
AA seq
DB search
MADAAARQGQAASGAQRFPSSPGQGDSLLAQRDQALQKEAECADMDHGLAAAWDGAGKLA
KMALAGSISSKAAPPHSRKVSAAGVEVHQSKMDFFCKLGYGKQDICKVLENLGQEALEDD
VLKELIRMGSKPQALEDQAQPSQLKLVARGSCSTSPGLKWPGEDESDSSDSLRPIVIDGS
NVAMSHGNKEVFSCWGIQLAVDWFRERGHTDIKVFVPLWRKEPPRQDSPIADQHILEELE
KQSILVYTPSRKVKGKRVVCYDDRYIVKVAYQSDGVIVSNDHYRDLQNENPEWKWFIEQR
LLMYSFVSNRFMPPDDPLGRHGPTLSNFLSKKPVLPEKKWQPCPYGKKCTYGNKCKFYHP
ERQHQAQLSVADELRAKTKVPLPQGKEEERCQCSPCHACTETLREARGCSGPSRCPGRSQ
GGCSEQTFRAWPGSAGSDLRRDPRLPQPEPLLEKMSAVSIREDTYGCSWSRCTSRDRGVS
DSPQPCSDLRHKLLSLHPPPGLERPGSPGCPFQRGALPAVPGGMCAERGWARERPGVPGE
GHGSGCFPRGAQHEQALESQQRLLRQCPALCPARLPPYGEPHPHAQPHPHAQLQQRCVPG
QPPGQPAQLEPSDGTGLFQNAHAYPSAAYRDYWHTPAANPPSAQQINIQRELCSPYPYSG
MSQVVTLYPSIQDKGTGAPPL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgctgcagctcgtcaaggccaggcagcatccggagctcagcgcttcccaagc
tccccaggccaaggggattcactgctggcacagagggaccaagccttgcaaaaagaagca
gagtgtgcagacatggaccacgggcttgctgctgcctgggatggagccgggaaacttgct
aaaatggcactggccggttcaatttccagcaaagcagcaccaccacactccagaaaagtt
tctgcagccggggtggaagtgcaccagagcaagatggattttttctgcaagctgggctac
ggtaagcaggacatctgcaaagtgctggagaacctgggccaagaggccctggaggatgat
gtgctgaaggagctgattcggatggggagcaaacctcaggctctggaggaccaggctcag
ccttcccagctgaagctggtagcccgtgggtcgtgcagcacctccccagggctgaagtgg
cctggagaagatgaaagtgattcttctgactccctgaggcccattgtgatcgatggcagc
aatgttgccatgagtcatggaaacaaggaggtgttctcctgctggggcatccagctggcg
gtggattggtttcgagagagggggcacactgacatcaaggtttttgtcccactctggagg
aaggaaccccctcgacaagacagccccattgcagatcagcacatccttgaggagctggag
aagcaatccatcctggtgtacaccccctccaggaaggtgaagggcaagcgggtggtttgc
tacgacgatcgctacatagtgaaagtcgcttaccagagcgacggagtcattgtttccaat
gaccactaccgggacctccagaatgaaaaccccgagtggaaatggttcattgagcagcga
ctgctcatgtactcctttgtcagtaacaggtttatgcctcccgacgatccattaggccgg
cacggacccaccttaagtaacttcctcagcaaaaagccagtgcttcctgagaaaaaatgg
cagccttgcccttatggtaaaaaatgcacctatggcaacaaatgcaaattttaccatcca
gagagacaacatcaagctcagctttcggttgctgatgagctcagggccaaaacaaaggtc
ccgttaccccaggggaaggaggaggagaggtgtcagtgctccccgtgccacgcctgcaca
gaaactctgcgggaagcccgaggctgctcggggccctcccgctgcccaggccggtcccag
ggcggctgctcggagcagactttccgtgcctggcccggcagcgccggctctgacctgcgg
agggacccgcgcctgccgcagccagagccgctgctggagaagatgtcagcggtgtccatc
cgtgaggacacctacggctgcagctggtcccggtgcacctctcgggacaggggcgtctcg
gacagcccccagccctgctccgacctcaggcacaagctgctctcacttcatccccctccg
ggcttggagcgccccggctctcccgggtgccctttccagcgaggagcgctcccggccgtg
cccggcgggatgtgcgcggagcgcggctgggctcgggagcgcccgggtgtgcccggagaa
gggcacgggagcggctgcttccctcgcggtgctcagcacgaacaggccctggagagccag
cagcgtctgctgcggcagtgcccggctctgtgccctgcccggctgcccccgtacggcgag
ccccatccccatgcccagccccatccccatgcccagctccagcagcgctgtgtgcccggc
cagcccccggggcagccagcccagctggagcccagcgacggaacgggattattccagaac
gcccatgcctaccccagtgccgcttacagggactactggcacaccccagctgcaaatcca
ccctctgcccagcaaattaacatacaaagggagctgtgctccccttatccgtacagtggg
atgagccaggtggtgactttgtaccccagtatccaggataagggcactggagcacctccc
ctgtga
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