Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445236
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Entry
135445236 CDS
T09958
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135445236 (RIMS1)
Membrane trafficking [BR:
zle04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
135445236 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
135445236 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
135445236
NCBI-ProteinID:
XP_064563429
LinkDB
All DBs
Position
3:11363479..11669154
Genome browser
AA seq
1570 aa
AA seq
DB search
MSSSVGPRGPRPPTVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEEARRYQGEHKDDAPTCGICHKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQPSPSQDGTLSDTATGASSDAPR
EKKARLQERSRSQTPLSTAAASSQEISSSSVQPDRRKGAEVSQPAMGPDQKQASRSRSEP
PKERKKAVSVSDQNGKGVKSERKRVPKSSLQKEGPTDDRERKERHEGRRLEKGKSQDYPD
LPEKLEEGKVPDDEKQRKEDEYHTRYKSDPNLARYPVKPHPEEQQMRMHAKVSKARHERR
HSDVALPHTEMEEAEVPENKLGKRSQLQGTQDRKSLVETQRSYSIDRTGDVRISVSKQLT
NHSPPTPRHSPVPIEHVEYKNHDSFIKQSRLDPSSAILMRKAKREKMETMLRNDSLSSDQ
SESVRPSPPKPHRAKRGGKKRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYY
WLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKM
TELGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKPLPGATNEEVYNIILESKSEPQV
EIIVSRPIGDIPRIPETSHPPLESSSSSFESQKMERPSISVISPTSPGALRDAPQVLPGQ
LSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSL
EPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWY
KLQTHDESSLPLPQPSPFMPRRHVHGGESTSKKLQRSRPISDSDISDFDVDDGIGVVPPV
GYRPSTREGKSTTLTVPEQQRTTTHHRSRSVSPHRGDDQGRPRSRLPNVPLQRSLDEIHQ
MRRSRSPTRHHDASRTPVDYRSREMDSQYLSDQESELLMLPRAKRGRSAECLHTISELQP
SLDRARSASTNCLRPDTSLHSPERERGRWSPSLERRRPTSPRIHIQHASPEDDRTRTLES
CIPKQDSVDHLSAKPGAAQRQSRKVERYSSQKQARKGPAAETERTHQQGSPTQSPPADTS
FSSRRGRQLPQVPVRSGSIEQASLVVEERTRQMKMKVHRYNQTSGSGSSQEHEREQYTKY
NIQTDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRISTFTPK
MQGRRMGTSGRITKSTSVSGEMYKLEHIDGSQSDTAVGMVGTGGKKRRSSFSAKVVAIVS
RRSRSTSQLSQTEAGSKKLKSTIQRSTETGMAAEMRSRMVRQPSRESTDGSINSYSSEGN
LIFPGVRLGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLEVEVIRARG
LIQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQTLVFEESPQGKVLQVI
VWGDYGRMDHKCFMGVAQILLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTRRASQSSLE
SSTGPPCIRS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggtggggccccgcggccctcgcccgcccacggtgccccccccgatgcag
gagctgcccgacctgagccacctgacagaggaggagaggaacatcatcatggcagtgatg
gaccggcagaaagaggaggaagaaaaagaagaggccatgctcaagaggttgcatcaacaa
tttgaaagctataaagagcaagtaagaaagataggggaagaagcccgccgttaccaggga
gagcacaaggatgatgctccaacatgtggaatctgtcataaaacaaagtttgcagatggt
tgtggccatttgtgctcttattgccggaccaagttctgtgctcggtgtggaggtcgtgtc
tctctgcgatcaaacaatgaggacaaagtggttatgtgggtatgcaatttatgtcgaaag
caacaagaaatcctaacgaaatccggagcgtggttttttgggagcgggccgcagccgtcg
cccagccaggacgggacgctgagtgacacggccacgggtgcgagctcggacgcaccgaga
gagaagaaagccaggcttcaggagcgatcgaggtcacagactcccctgagcacagcagct
gcctcatcacaggaaatctcctcttccagtgtgcagcctgaccgtaggaaaggagcagaa
gtgtcgcagccggctatgggcccggaccaaaagcaagcttcaaggtctaggagtgaacct
ccaaaagagaggaagaaggcagtatcagtttctgaccagaatggcaaaggtgtaaagagt
gagcgtaagcgtgtgccaaaatcctcacttcagaaagaaggaccaacagacgacagggag
cgtaaagagcggcacgaaggtagaaggctggagaaaggcaagtcacaggattacccagac
ttgccagagaaacttgaggaaggcaaagtgcctgacgatgaaaaacaaaggaaggaagat
gaatatcatacccgttacaagagtgaccccaatctggcgagataccctgtaaaaccacac
cccgaggagcagcagatgcgcatgcacgccaaagtttctaaagcacgacacgagagaaga
cacagtgatgtagctttgccacacactgaaatggaggaagcggaggtacctgagaataaa
ttaggaaaacgctcacaattacagggaactcaggacagaaaatctcttgtggaaactcag
aggtcgtactctatagacagaacaggtgatgtaagaatttctgtttctaaacaattaact
aatcatagcccaccaactcccaggcatagtccagttcctatagaacacgtagaatacaag
aaccacgattcctttataaaacagagccgccttgatcctagctctgctattctcatgcga
aaagcaaagcgggagaaaatggagaccatgctaaggaatgattcccttagctctgaccag
tcggaatcagtgcggccatcccctccaaagcctcatagagcaaaaagaggcggaaagaaa
aggcagatgtcagttagtagctcagaggaagaaggggcatcaacaccagaatatactagc
tgtgaagatgtggagatagaaagtgaaagtgtcagtgaaaaaggtgacttggattattac
tggctggatcctgccacgtggcacagcagggagacgtcccctattagttcgcatcccgta
acgtggcagccttccaaagagggagatcgcttaattgggcgtgttattcttaacaagaga
acaaccatgcctaaagaatcaggtgcattactggggctaaaagttgttggaggaaaaatg
acagaattaggacgactcggtgccttcattaccaaagtgaagaaaggtagcttggctgat
gtggtggggcatctcagagcaggggatgaagttctagaatggaatggtaaacccttgcct
ggagctacaaatgaagaagtttacaacattattttagaatcaaaatcagaacctcaagtt
gaaatcattgtttcaaggcctattggtgatattccacggattcccgagacttcccacccc
ccattagagtctagttcaagttcttttgaatctcagaagatggaaaggccttctatttct
gttatatctccgactagccctggagccctacgggatgcacctcaggtcctaccagggcag
ctttctgttaaactctggtatgacaaagtgggacatcagttaatagtaaatgttctacag
gcaacagatttgccaccaagagtagatgggcgccccagaaatccctatgtaaaaatgtat
tttcttccagacagaagtgataaaagtaaaagaaggaccaaaacagtaaagaaaagtcta
gagccaaaatggaatcaaacttttctctactcacatgtacatcgtagagattttagagaa
cgaatgcttgaaatcacagtatgggatcagccaagagtacaagaagaagagagtgaattt
cttggagagattcttatagagctggagacagcacttttagatgatgaaccacattggtat
aagctacagacacatgatgaatcttcactacctctgcctcagccatcaccattcatgcca
agaagacatgttcatggtggagagagcactagcaaaaaattacaaagatctcggccaatc
agtgatagtgacatctcagattttgatgttgatgatggtattggagttgttcctccagta
ggttataggcctagtactagagaaggtaaatccacaacgctaactgtgccagagcagcag
agaacaacaactcatcatcgttcacgctccgtctctcctcaccgtggtgacgatcagggc
aggccccgttcacgtttaccaaatgtgccattacagaggagtttagatgaaattcatcag
atgagaagatcacgttctccaactagacaccatgatgcctccagaactccagttgattac
agatccagagagatggatagtcagtatttgtctgatcaagaaagtgagcttcttatgctg
cccagagcaaagcgaggaagaagtgcagagtgcctacacaccatcagtgaactgcagccc
tcccttgacagggctaggagtgctagtaccaactgcttgagaccagatactagtttgcat
tcaccagaacgagaaaggggtagatggtccccctccctagagaggagacgacctactagt
cccaggattcatatccagcatgcatctccggaggatgacagaacaaggacgctggagtct
tgcattccaaaacaggacagtgtagaccacctaagtgctaaacctggagcagcacagagg
cagtccagaaaagtcgaaagatatagcagccaaaaacaagctaggaaaggccctgcagct
gaaacagaaagaacacatcagcaaggaagtcccacgcagtctcctcctgcagacacctcc
ttcagcagtcgtaggggaagacagctaccacaagttccagtaagaagtggcagtatagag
caagcaagcttagtagtggaggagcgaacgagacagatgaaaatgaaagtgcaccgttat
aatcagacatcagggtctggttctagccaagaacatgagcgtgagcaatataccaagtat
aacatacaaacagatcagtacagaagttgtgataacgtctctgccaaatcatcagatagt
gatgtcagtgatgtgtcagccatttcccgaaccagcagtgcctctcgcctcagcagcaca
agttttatgtcagagcagtctgagcgccctcggggcaggatcagtacatttactcctaaa
atgcaaggcagacggatggggacgtcagggagaatcacaaagagcacaagcgtgagcggg
gagatgtacaagctggagcacattgacgggagccagtcggacacggccgtcggcatggtg
ggaacaggtgggaagaaaaggcgctccagctttagtgccaaggtggttgccatagtgtct
cgaaggagcagaagcacatcccagcttagtcaaacagaggctggcagcaagaagctaaag
agcacgatacagagaagcacagaaacaggaatggcagcagagatgagaagtcgtatggtt
cgacagccaagtcgagaatccactgacggcagcataaatagttacagctccgagggcaac
ttaatatttcctggagtacggctgggcgctgacagtcagttcagtgatttcctcgatggg
ctgggacctgcacagttagtaggccgacaaacactagcaacccctgccatgggtgacatc
cagattggaatggtggataaaaaaggccagttagaagtagaagtcattagagcccgtggc
ctcatccaaaaacctggctccaaatctaccccagctccgtatgttaaagtgtatttactg
gaaaatggagcatgtatagctaagaagaagacaagaattgcaaggaagacgcttgatcct
ctgtaccaacagacactggtttttgaggaaagtccacagggtaaagtccttcaggtaata
gtctggggagactatggccgaatggaccataaatgcttcatgggagttgcccagatcctt
ctggaggaactggatctgtccagcgtggtaataggctggtataaattatttccaccttca
tcgctagtggatccaacattgactcccctgacacgtagggcttcccagtcatctctggaa
agttcaactgggcctccctgcattagatcatag
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integrated database retrieval system
