Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445363
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Entry
135445363 CDS
T09958
Symbol
ODC1
Name
(RefSeq) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle00330
Arginine and proline metabolism
zle00480
Glutathione metabolism
zle01100
Metabolic pathways
zle04148
Efferocytosis
Module
zle_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
135445363 (ODC1)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
135445363 (ODC1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
135445363 (ODC1)
Enzymes [BR:
zle01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
135445363 (ODC1)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
135445363
NCBI-ProteinID:
XP_064563786
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Position
3:complement(28340813..28350786)
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AA seq
460 aa
AA seq
DB search
MSNFSKEEFELTFLDEGFTAKDILDQKINEVSSSDDKDAFYVADLGDIVKKHMRWHKALP
RVTPFYAVKCNDSKAVVKTLAVLGAGFDCASKTEIQLVQSIGVPPERIIYANPCKQVSQI
KHAASSGVQMMTFDSEVELMKVARAHPKAKLVLRITTDDSKAVCRLSVKFGATLKTSRLL
LERAKELDLAIVGVSFHVGSGCTDPETFVQAISDARCVFDMGAELGFNMYLLDIGGGFPG
SEDVKLKFEEITSVINPALDKYFPSDSGINIIAEPGRYYVASAFTLAVNIIAKKIVLKEQ
TGSDDEDDTNDKTLMYYVNDGVYGSFNCILYDHAHVKPVLQKRPKPDDSCYSCSIWGPTC
DGLDRIVERFNMPELQVGDWILFENMGAYTVAAASTFNGFQRPTIHYVMSRPAWQLMQQI
KEQGFLAEVEEQDVASLPVSCAWESGIEYPATCASASINV
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacttcagcaaagaagaatttgagttgaccttccttgatgaaggctttactgcc
aaggatatccttgaccaaaaaataaatgaagtgtcatcttctgatgataaagatgccttc
tatgttgctgacctcggggacattgtgaagaagcacatgcggtggcataaggcccttcct
cgggtgacgcccttctatgccgtaaaatgcaacgacagcaaagctgtggtgaagactctt
gctgttcttggggcaggatttgattgtgccagtaagactgaaatacagctggtacagagc
attggtgtgcctcctgagcgaataatatatgcaaatccctgcaaacaagtatctcaaatc
aaacatgctgccagcagtggtgtgcagatgatgacatttgatagtgaagtagaactaatg
aaagttgcaagggcccatccaaaagccaagttggtcttgcgcattaccaccgatgactcc
aaagcagtctgtcgtctgagtgttaaatttggggctacacttaagaccagcaggcttctt
ctggagcgtgcaaaagaacttgaccttgccattgttggagttagtttccatgttggaagt
ggatgtacagacccagagacctttgttcaagccatttctgatgcccgctgtgtgtttgat
atgggagctgaacttggcttcaatatgtatctgcttgatattggtggtggcttccctggc
tctgaagatgtcaagcttaaatttgaagagatcacaagtgtaatcaacccagcactggac
aaatacttcccttccgattctggaataaatattattgcagagccaggaagatactatgtt
gcatcagcattcactctggcagtcaacatcattgcaaagaaaattgtgttaaaggagcaa
acaggttctgatgatgaagatgatacaaatgacaaaacacttatgtactatgtgaatgat
ggggtctatggatcattcaactgcatcttgtatgatcatgcacatgttaagccagtgctg
caaaagcggcctaagccagatgacagctgctactcctgcagcatttggggaccaacgtgt
gatggcttggatcggattgttgagcggttcaacatgcccgagctgcaagttggtgactgg
atcctgtttgaaaacatgggtgcctatactgtcgcagcagcttctactttcaatggattc
cagaggccaacaatacactatgtgatgtcaagaccagcatggcaactaatgcagcagatc
aaggagcaagggttcctagctgaggtggaggagcaggatgttgctagtctgccagtctct
tgtgcctgggaaagtggaattgaatatccagcaacttgtgcttcagctagtattaatgta
tag
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