Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445384
Help
Entry
135445384 CDS
T09958
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135445384 (GEN1)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
135445384 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
A2L_zn_ribbon
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
135445384
NCBI-ProteinID:
XP_064563826
LinkDB
All DBs
Position
3:31896303..31919617
Genome browser
AA seq
978 aa
AA seq
DB search
MGVTYLWQILEPVRQPVNISSLRGKTLAVDLSLWVCEAQTVKKMVGVVAKPHLRNLFFRF
SFFTSMGIKLVFVMEGEAPRLKADTMSKRNEMRYGPSKKAGAVRTGRSLFTAMLKECLEL
LECLGVPWVQAAGEAEAMCAYLNAKGLVDGCITNDGDVFLYGAQTVYRNFAMNAKDPHLD
SYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQALKLIETLQGQNLLQRFEQ
WKEQFRHDDNPPLVVKRVIHCSECHHPGSYKEHEHNGCKFCESVRCCKPSDSKHCCPCAW
HQWERVKQANALEDSIRKKAMSCEGFPFSEVIHEFLVNKNKMINIKECRRPNLLSFQLFA
SEKMEWTKHYACKKLLALLTRYDMIQRKSGNIDSKQLQAIRTATSRNGKMAKYTVTKNGH
AGKKKQDKHAITFSQNTFPPSRIVKTRVKNGIPCFEIEWQKPEHYVDPEDEPVELFVVTV
EEESLFQAAYPDVVALYQVEKSDILQKKQKKKKDRSEEKELPNSYAEITSLLSQINLKPT
HRILPVQHSMSDTKSPPEDQTQQRSTGSKDVALPSASCSTSVHVSTSAAALADSSVPSQC
TKYSGMSSSYFVPGLQLSSTGGKGTSFSSTPAHGGDDCDPAADLTTCIKHSHPLSHGTVR
NSSEYSDVTQSDVHSDSEDDLFTNYAVGQIQEWSLSERILKKAPIPSQPLSEDAVQLESL
NCFKQTKETLNTDRNHVSSSCQLNNPVQENKNVLSENSASASSLHIYQDAYKKADILAEM
VQKDPSRSGSASLACSGKTTETLHPGWEMLPASQKPADATGCHIKEAGIETSWKVSSKKS
VCQNRCSSSEDSDDGHVDKILVYEQQKRQLNPGQFKKCFTKKKGSIVTSKRTNSDSALTI
KRKNKMINLEKAANGFSVQVAPKPSSVEEVNCSQSPERPVERLGSDPTQQEKSAALTSAW
ADSPLPLSERLKRRIKIN
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgacttacctatggcaaatcctcgagcctgtgaggcaacctgtcaacataagt
agtctcagagggaaaacacttgctgttgatttaagtttgtgggtttgtgaagcacagact
gttaaaaagatggttggagtagttgccaagccacatctcagaaacctgttttttcggttc
tctttctttacatcaatgggaattaaacttgtgtttgtcatggagggagaggcccccagg
ctgaaagcagacaccatgagcaagaggaatgagatgcgctatgggccttcgaagaaagct
ggagctgtaagaacagggaggtctttatttacagccatgttaaaagagtgtcttgaactg
ctggagtgtttaggtgtcccttgggttcaagcagctggagaggcagaggcaatgtgtgcc
tacctaaatgcaaaaggacttgttgatggctgcattaccaatgatggagatgttttcttg
tatggagctcaaacagtttatagaaactttgccatgaatgctaaggatccacatcttgac
agttacacaatgtcctctattaaagagaaactcggttgtgacagagagtctttgattggg
ctagcagttcttctgggctgtgattatcttccaaagggggttccaggagttgggaaggag
caagctttaaagttaattgagactctgcaaggtcaaaacttattgcaaagatttgagcag
tggaaggaacaatttcggcatgatgataatccacctttggttgttaaaagggtaattcac
tgttcagagtgccatcatccaggatcttacaaggaacatgagcacaatggatgtaaattc
tgtgaaagtgtgagatgctgcaaacccagtgactccaaacactgctgcccctgtgcatgg
catcagtgggagcgagtgaaacaagcaaatgcgttggaggacagtatcagaaaaaaagcc
atgagctgtgagggctttccattttctgaggttatccatgagtttcttgtaaacaagaat
aaaatgatcaacataaaggaatgtcgaaggccaaatttattgtcctttcagctatttgct
tcagagaagatggaatggaccaaacattatgcttgtaagaagctgttagcacttttgaca
cgttatgatatgatccagagaaaatccggaaacattgattcaaaacaactgcaggcaata
cggactgctacatcgaggaatggaaaaatggccaagtatacagttactaaaaatggacat
gcagggaagaaaaagcaagataagcatgcaattactttctcccagaatactttcccacca
tccaggattgttaagacccgtgttaaaaatggaattccttgttttgaaattgaatggcaa
aagccagaacattatgttgatccagaagatgagcctgtggagttgtttgtagtcacagta
gaagaagagtctttgttccaggctgcttatcctgatgttgttgccctctatcaagtggaa
aagtcagacattcttcagaagaaacagaaaaaaaagaaagacagatcagaagaaaaggaa
ttaccaaattcttatgctgaaattaccagtcttctgtctcaaattaatttaaagcctaca
cacagaattcttcctgtgcagcactccatgtcagatacaaaatctcctccagaagatcag
acacagcagagaagtactggatcaaaagatgtagcattaccttcagcttcctgcagcaca
tcagttcacgtgtcaacatcagcagctgctcttgctgactcatctgtgccctcacagtgc
actaagtattcagggatgtcatcctcttactttgtgcctggtctgcagctgagcagtact
ggtgggaaaggaacctccttcagctctacaccagcccatggaggtgatgactgtgatcca
gcagctgacttaaccacatgcataaaacactcacatccactaagtcatggaacagtaaga
aatagctcagagtattctgatgttacacagtctgatgtgcattctgatagtgaagatgat
ttgttcacaaattacgctgtgggacaaattcaggaatggtctttaagcgagagaatactt
aagaaggctcccattccatcacagcctttgtctgaagatgcagtgcaactggagtctttg
aattgttttaaacaaacaaaagaaacattgaatactgatagaaatcatgtctcttcctca
tgtcagttaaataacccagtgcaggaaaataaaaatgttctatcagaaaactctgctagt
gcatccagcctacatatctatcaagatgcatacaaaaaagctgacatcctggctgagatg
gtgcaaaaagacccttccagaagtggttcagcatctctagcctgcagtgggaaaacaaca
gagacacttcatcctgggtgggaaatgcttccagcatctcaaaagccagcagatgcaact
ggctgtcacattaaagaagctggtatcgaaacttcttggaaagtttcttctaagaagagt
gtctgtcagaacagatgctcttccagcgaagacagtgatgatgggcacgtggataaaatc
ctggtttatgagcagcagaaaaggcaactgaaccctggccagtttaagaaatgttttaca
aagaaaaagggtagcattgttactagcaaaaggacaaacagtgactcagcccttacaatt
aagaggaagaataaaatgatcaatttagagaaagctgccaatggtttctcagtgcaagta
gctccaaaaccatcctctgtagaggaagttaattgttcccaaagtccagagagaccagtt
gaaagactgggttctgatcccacacagcaagagaaaagtgctgctctgacttctgcgtgg
gcagacagtccccttcccctgtctgaaagactgaaaagaagaatcaaaatcaattag
DBGET
integrated database retrieval system
