Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445402
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Entry
135445402 CDS
T09958
Symbol
SCML2
Name
(RefSeq) sex comb on midleg-like protein 2 isoform X1
KO
K11465
sex comb on midleg-like protein 2
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
135445402 (SCML2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135445402 (SCML2)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
135445402 (SCML2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
135445402
NCBI-ProteinID:
XP_064563876
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Position
1:16775503..16848936
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AA seq
729 aa
AA seq
DB search
MGRTAAKDSKNIRKEKDGKNQQANNPSLKSEQFNWDDYLKETESVAAPLHCFRQSRIPPT
NDFKVGMKLEARDPRNVTSVCIATVIGITGARLRLRLDGSDNKNDFWRLVDSSDIQPIGT
CEKKGGMLQPPLGFQMNASSWPMFLLRTLNGAEMAPAAFFKKEPPKPVPNCFKVGMKLEA
IDRKNPYLICPATIGDVKGDEVFVTFDGWRGAFDYWCRCDSRDIFPVGWCSLTGDALQPP
GNNVSITKSSAKIQSSPSKVTRRSMQSPQKSAPVPAQRGRKPGRGKPPGQSAVPKKGRSP
KNIPLTKSTSHTENLKTRKKSLKPGKKKKTLPEQLTPTSLSPQSSPEGENGTAQTLKDGI
SLSGATAAVISTVCVYVNKHGNSGPHLDKKKVQQLPDHFGPGPVNVVLQQAVQACVDCAY
QAKTVFGFLKSGHHGGEMITASFDGEKHAINLPSVNSASFVLRFLEKLCHSLQCDNLFSS
QPFSPYMGCAHSPMEYDRNKPAKEEIPENRSAKRYPQDSPPYTAPLSPKLPRNDAHPSEA
ETLPIEENSTSKEHRFSEDSMDSALNSVNPSNPACRNSTEYRPSGNAAFYRNSHQPATAT
SNSAPVLRRLSLSSAGSSGYYEVSRNRIHRRIEAASSTTGPDLNSLKREPSRILNKDPST
WSIEEVVRFVKEADPRALAPHAELFRRHEIDGKALLLLRSDMIMKYMGLKLGPALKLCYH
IERLKQGKF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggggagaacagcagcgaaagattcaaagaatattagaaaagagaaagatggaaagaat
cagcaggcaaacaacccatctttaaaaagtgaacagtttaattgggatgattatctgaaa
gaaactgaatcagtagctgcccctctgcattgtttcagacagtctagaattccacctacg
aacgatttcaaagtcggcatgaagctggaagcgcgcgatcctcgcaacgtcacctcggtt
tgtatcgccacggtcattgggatcactggtgccaggctaaggctgcgcctcgatgggagt
gacaacaaaaacgatttctggaggctcgtggattcctcagacatacagcccattgggacc
tgtgaaaagaaagggggcatgctccagcctccacttgggttccagatgaatgcatcctct
tggccaatgtttctcttaagaactctcaatggagctgaaatggcacctgcagcattcttt
aaaaaggagccaccaaaacctgtgccaaactgctttaaagttggaatgaaactagaagct
atagataggaagaacccatacctgatttgcccagcaaccattggagatgttaaaggagat
gaagtttttgttacatttgatggttggagaggagcatttgactattggtgcaggtgtgat
tctcgagatattttcccagtcggatggtgtagcttgacaggagatgcattacaaccacca
gggaacaatgtttccattacaaagagcagtgcaaaaatccaatcttccccttccaaagtg
acccggcgttcaatgcagtctccacagaaatctgctccagttccagcgcagcggggcagg
aaaccaggtcggggcaaaccccctggacagtctgcagttcccaagaagggcaggtctcct
aaaaatatccccctgacaaaaagcacctctcatactgaaaatcttaaaacaaggaaaaaa
agtttaaaacctggaaaaaagaaaaaaaccttgcctgaacaactgactcctacatctctt
tctcctcagtcatctcctgagggggaaaatggaactgcacagacacttaaagatggaatc
agtttgtctggtgcaactgcagcagttatatccacagtgtgtgtgtatgtgaacaaacat
ggaaattctgggcctcacctggataagaagaaggttcagcagcttccagaccattttgga
ccaggtcctgtaaatgtggtccttcagcaggctgtacaggcttgtgtggattgtgcctat
caagccaaaacagtctttggatttctgaaatctggccatcacggaggggaaatgataact
gcttcctttgatggggaaaagcatgccatcaatcttccttctgtaaacagtgcatcgttt
gtcctgcgcttcttggagaagctgtgccacagtctgcagtgtgataatctcttcagcagc
cagcccttcagcccttacatgggatgtgcccacagtcctatggagtatgataggaataag
ccagccaaagaagaaatacctgagaacaggagtgctaagcgataccctcaggactctcca
ccatatactgctcctctttcccctaagcttcccagaaatgatgctcatccatctgaagca
gaaacattgcctatagaggaaaacagcacttccaaagagcaccgattttctgaggattct
atggattctgcacttaattctgtaaatccatcaaacccagcctgtcggaattccacggag
taccggccttcaggaaatgctgcattttacagaaactcccatcagccagcaactgctacc
tcaaattcagccccggtcctgcgcaggctgtccctgagctcggccgggagcagtggttac
tatgaagtcagcaggaatcggatacacaggcggattgaagctgcaagttccacaactgga
ccagatttgaattcactaaaaagggaaccttcaagaatattgaataaggatccttccact
tggtcaatagaggaagtagtgcgttttgtgaaagaagctgatccacgggcactggctcca
catgcagaactcttcaggagacatgaaattgatgggaaagcactactcttactgaggagt
gatatgataatgaaatatatgggactgaagctggggcctgccctgaagttgtgctaccac
attgaacgacttaaacaagggaagttctag
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