Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445448
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Entry
135445448 CDS
T09958
Symbol
REV3L
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
135445448 (REV3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zle03400
]
135445448 (REV3L)
Enzymes [BR:
zle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
135445448 (REV3L)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
135445448 (REV3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
135445448
NCBI-ProteinID:
XP_064563967
LinkDB
All DBs
Position
3:complement(39023699..39136200)
Genome browser
AA seq
3164 aa
AA seq
DB search
MFSVRIVTADYYMGSPLPGLDPCQSRFREAPAKRVPVVRVFGATPAGQKTCLHLHGVFPY
LYVPYDGFGQHPECYLRQVAFSIDRALNVALGNPSSTVQHVFKVSLVSGMPFYGYHEKER
QFMKIYLYNPAMVKRVCELLQGGAIMNKSYQPHEAHIPYLLQLFIDYNLYGMNLINLAAV
KFRKARRKGDTSGVSKHHRTHLPEYSSNVSFAEWEEDEIPSSLMLKGVEPQSTCELEVDA
VAADILNQLDIEAQIGRNPGLQAIWEDEKQRRRQKCESSQIKPPESQDRGFVPATESEKF
FQKRLKEILKQNDFSVTLSGSLDYSNGSEEFSAELTLHSEVLSPEAFPCTPANTVEVHDD
KQMGKDSNRMHTDKEEEALINEEAILNIVENSQCFQPLSQRLNQTTVFMGSSADEAMIDL
LAGLESDGYQIGHQKTLSHHRSLGNWRNSQNSDDEENEPQCEKEEMELSLLMSQRWDSSM
EEPGQKRRSAGKNMHRSSTEEDSSSEEEMEWSGNNILSNLSIPQLDGTADENGDNPLNNE
SSRTHSSVIATSKMSVKTSIFHKDAATLEPPSSAKITFQCKHTSALSNHVLNNEDFVEDL
SQPNTETRPELSVHSLTKESTYSAKYPTPFSNSTHAENSHKESNKKDTLPVPSCGNNIFD
YEDDISSVNRPIPSRKYISIRKAEKDVSFIHVGRHIGDNMLNKNLYNFSDMSHSKGKMSS
EVNEKSSSASINSFFPATVTENCELVSCSGGSRTVVHSLENNTDEGGLNKLKIRYEEFQE
HKAEKPSLSQQAAHYMFFPSVVLSNCLSRPQKLAPVTYKLQQGNKQSRLKLNKKKHSFIN
RQEPAGVNDVAAVKEGCYTQGNACSNIPDKDSALPSDLVQVPLEAFENKMPTSTANYTDC
QFADGSLETEQSFGLCGNKYTLRTKRKVNYEAEDSESSFVAHNSKINLPQPMESVESLDG
SQKSRKRRKLSKKLPPVIIKYIIINRFRGRKNMLVKLGKVDSSEERVVLTEEKMNLYKKL
APLKDFWPKVPDSPATKYPIYPLTPKKSHKRKAKHKSTKKKAGKPQKTGSTNIKRTLSFR
KRTHTILSPPSPSYSAEAEDCDYNYSDVMSKLGFLSERSTSPVNTSPPRCWSPTDPKAEE
ILTNLDREALFNRGPNIYNSKTVNSSVGKTSRAKTQVKKCKKKFASPTVSTKKKKKINQV
DKTPDDGKKKPRTKQKAAEKASSRKRVVFKDEKESSHSATEVKFVLKHQDPHEISYNSVC
SQPLHNLKDSPLPGYSAGYLPSAQLPSADAQGSSSGCFHSLMEIDKPVDAQFLPAPREDP
HPSFTSTLTASGREVPKMSSQRSRTQSAIFRMKDSALIQNIFDPSNHSTHITQNAHISKD
KTSPKAEERKNFQIRYLPPAGKLNETRDSLDTAKMDQLHTTNYLHCKDNNQQQIFCLPDA
SKHSDPCSSILKPSEENPGPLQLPKNCLVTSLKSPMKQLNCDQNQRGFILDMSHFKPETT
KQRPLSETTMQPKPISQYKNRNIVAPSAFGEGQSGLAVLKELLQKRQQKAQNASIAQEPL
PDKTQLSKGIPCPLEQNKAIKRSRPVTSSRKSRSPRSTKPKEKTAKLAKKESSSQPMTNR
TDHSVSNDSPIFFSDPGFESCYSLEDSLSPDHNYNFDINTIGQSGFCSFYSASQFVPADQ
NLPQKFLSDAVQDLGSGQTTEGDFLCHNDQKSEEEKQHSSSTNKWIRSGSLSPELFEKTS
LDNSENHCHSQWRKNIHSSTSRSSFIDTSCTQETEVCLNEKFKLNINTVNKERFLNLSQP
TCSDWIQSHLRKETTFEPCQPLDSVNTSFTSLLSSPDGELLDAASEDLELHVSRNNEALT
PTPDSSPRSTSSPSQSKNGSFTPRTAHILKPLMSPPSREEIMATLVDHDLAETVYQEPFC
SNPSDAPEKPREIGGRLLTVETRLPNDLPEFEGDFSLEGLRLWKTAFSAMTESPRPGSPP
HYGHSTVHKRESNSHKTSEDKKIVIMPCKCAPSQQQVQIWLHAKEEYEHFKKLPKNHPAE
QAKADENFSSAELSEEKSIEVIKVAKDLNLSSLEDERPIVPTKTSPASVAENTKTQTKEN
CDKSISTIGTSVNTKNDVDSNKTSCASKTHTTSALEHDKEEEEEEEDYYVSYSSPDSPVL
PPWQQVASPDPKQSSLEDTEWKNQNIILSSGEGNDVGSTQNSPCTQENIRTSFDTSPLPV
NEDPGNSESVHLHSTPIVHRKSQDGIPEVLGFTPLSAVPKAQKLSHKRGSNTDGLRRVLL
TTQMKNQFAALGAPKKETSQIEGPSLNNTYGFKVSVENLQEAKSLHEVQHLTLISMELHA
RTRRDLEPDPEFDPICALFYCVSSDSALPNTDKKEITGAIVIDRGRTPSSQGSRDQAPLL
TRSGVTGLEVSYATDERTLFQEVVNIVKRYDPDILLGYEVQMHSWGYLLQRAAALNVDLC
QMISRVPDENKENRFATELDEYGADTMSEINIVGRIVLNIWRMMRHEVNLTNYTFENVGF
HVLHHRFPLFTFRVLSDWFDNKADVYRWKMVDHYVSRVRGNLLLLNKLDLIDRTSEMARV
FGIQFLHVLTRGSQYRVESVMLRIAKPMNYIAVTPSVQQRAQMKAPQCVPLIMEPESRFY
SNAVLVLDFQSLYPSIVIAYNYCYSTCLGHVENLGKYDAFKFGCTSLRVPPDLLYQIRHD
ITVSPSGVAFVKPSVRKGVLPRMLEEILNTRIMVKQSMKAYKHDKAVTRMLEARQLGLKY
IANFTFGYTAANFSGRMPCTEIGDSIVHKARETLERAIKLVNDTKKWGAHVVYGDTDSMF
VLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQK
DPVFDAKGIETVRRDSCPAVSKILECSIKLLFETRDISQIKQYVQNQCMKLLEGKASMQD
FIFAKEYRGSSAYKPGACVPALEITRRMLAYDRRSEPRVGERVPYVIVYGMPGLPLIQLV
RRPLELLQDPSLRLNATYYITKQILPPLARVFSLIGIDVFSWYHELPRIQKAASAAHTEL
EGRKGTISQYFTTLHCPVCDELTQYGICNKCRSQPQHVAVILNQEIRELERKQEQLVQIC
RNCTGCFDRHIQCVSLNCPVLFKLSRVSRELSKAPYLRQLLDQF
NT seq
9495 nt
NT seq
+upstream
nt +downstream
nt
atgttctcagtgcggatcgtgactgccgactactacatgggcagcccgctgcccggcctg
gacccctgccagtcccgcttccgagaggccccggccaaacgggtgcccgtcgtgagagtc
ttcggcgccacccctgcaggtcagaagacttgtctccacttacatggtgtcttcccttac
ctctatgtaccgtacgatggttttggacagcatccagagtgctaccttcgtcaagtggcg
ttcagcattgacagggcactcaatgtggctttaggaaatccatcttctactgtccaacat
gttttcaaagtatcattagtgtctggaatgcctttttatggttaccatgaaaaggagaga
cagtttatgaagatttatctttacaatcctgcaatggtaaaaagagtttgtgagcttctg
caaggtggagccataatgaacaaatcttaccagcctcatgaagcccatattccctacctc
ctccaactctttatagactacaatttatatggaatgaatttaataaacctggctgctgtg
aaattcagaaaagcaaggagaaaaggtgacacatcaggtgtaagtaaacatcatagaact
catttgccagaatattcaagcaatgtatctttcgctgaatgggaagaagatgaaattcca
agctctttaatgttgaaaggtgttgagccacaaagtacctgtgaattggaggtggatgca
gtagctgctgacattttgaatcaactggatattgaagcccagattggcaggaaccctggt
ttgcaagctatatgggaggatgaaaagcagcgacggaggcagaaatgtgaatcttctcag
attaagccacctgagtcacaagaccgtggatttgtgccagcaacagagagtgaaaaattt
tttcagaagagacttaaggaaattctcaagcaaaatgacttctctgtaacgttgtcagga
tcattggactacagtaatggatcagaggagttctctgctgagctaacactacattctgag
gtactctctcctgaagcctttccatgtacaccagctaatacagtagaagtgcatgacgat
aaacagatgggcaaagattccaataggatgcatactgataaagaagaggaagcacttatt
aatgaagaagcaattttaaacattgtggagaatagtcagtgctttcagcctttgtctcaa
agactgaatcagactactgttttcatgggcagtagtgctgatgaggccatgattgatctg
ttggctggactggagagtgatggatatcagataggacatcaaaaaacactctctcaccat
cgttctcttggaaactggcgaaattctcagaacagtgatgatgaagaaaatgagccacag
tgtgagaaagaagaaatggaacttagcttgctaatgtcccagaggtgggacagtagcatg
gaagagcctgggcaaaaaaggaggtcagctggcaaaaatatgcatcgaagttcaacagaa
gaggattcatcttcggaggaagaaatggagtggagcggtaacaatatcctaagtaatctc
tcaatacctcagttagatggaactgcagatgaaaatggtgacaatcctttgaataatgaa
agttctcgaactcactcctccgtcattgcaacaagcaaaatgtctgtaaagacctcaatc
tttcacaaagatgctgctacactagaacccccatcttctgctaaaattacttttcagtgt
aaacacacaagtgccctttctaaccatgttttgaataatgaagattttgtagaagacctc
tcacaaccaaacacagaaacaagacctgaactttcagtccattctcttacaaaagaaagc
acttactcagccaagtacccaactccattcagcaatagtacccatgcagaaaactctcac
aaagagagcaacaagaaagatactctcccagttccttcatgtggaaataatatttttgac
tatgaagatgatatttcatcagtgaacagaccaatacctagtaggaagtacattagcatt
aggaaggctgaaaaggatgtctcttttattcatgtgggccgccatattggtgacaacatg
ttgaataaaaatttatataacttttctgatatgagccactccaaaggtaaaatgtcctct
gaagtaaatgaaaagtccagcagtgcaagtataaatagtttttttccagcaacagttaca
gaaaattgtgaattggtatcttgttcaggaggcagtcgaactgtggtacattcacttgaa
aataacactgatgaaggtggccttaataagcttaaaattaggtatgaagaatttcaggag
cacaaggcggaaaagccaagcctcagtcaacaagcagcacattatatgttctttcctagt
gttgttctttctaattgtctcagtcgaccacagaagttagctcctgtcacatacaaatta
cagcagggcaacaaacagtccaggctgaaactgaataaaaagaagcatagttttatcaat
cgtcaggagcctgcaggtgtaaatgatgttgcagcagtgaaggaaggctgctatacacaa
ggtaatgcctgtagtaacattcctgataaggatagtgctttacctagtgacttagttcaa
gttcctctcgaggcttttgaaaacaaaatgcctacaagtactgctaattacactgactgc
cagtttgcagatggatctcttgaaactgagcagtcatttggactgtgtgggaataagtac
acgctccgaacgaaacggaaggtgaattatgaggctgaagacagcgaatcgagctttgtc
gcacacaactcaaaaattaatctacctcaaccgatggaaagtgttgaaagtttggatggg
tctcagaagtctcgaaagcgtagaaaactttctaaaaaattgccacctgttattattaaa
tatattatcatcaatagatttagagggagaaaaaatatgcttgttaaattggggaaagta
gattctagtgaggaaagagtagtactcacagaggaaaagatgaatttatataaaaagctt
gcacctttaaaggacttttggccaaaagttcctgactctcctgcaaccaaatatcctatt
tatccactaacaccaaagaaaagtcacaaaaggaaagcaaaacataagtcaaccaagaaa
aaagctggaaaaccacaaaaaacaggtagtacaaatattaaaagaactttatctttcaga
aaaaggactcatacaattctttctcctccttcgccctcctacagtgctgaagctgaagac
tgtgactataactatagcgatgttatgtctaagttaggttttctttctgagagaagcaca
agcccagtaaacacatctccacctcgctgctggtctcccactgatccaaaagcagaagaa
attttaaccaacctggacagagaagctttatttaatagggggcccaatatctacaacagc
aagactgttaatagtagtgtaggaaaaactagtagggcaaaaactcaggttaagaaatgt
aaaaagaaatttgctagccccactgtatctaccaagaaaaagaaaaagattaatcaggtt
gataaaacaccagatgatggaaagaagaaacctagaacaaaacaaaaagcagctgaaaaa
gcgtcctcaagaaaacgcgttgtatttaaagatgaaaaagaaagtagtcactctgctaca
gaagtcaagtttgtgctaaagcatcaagatcctcatgagatttcttacaactctgtctgc
tctcagccacttcacaacctcaaagacagtcctcttcctggctattcagctggatatctg
ccgtcagcgcagctgccttcagctgatgcacaaggtagttcatcgggctgttttcactca
ctgatggaaattgataagcctgtagatgcacagtttttgcctgctccacgggaagaccct
catccatctttcacatctactctcacagcatctggaagggaagtaccaaaaatgagctct
cagaggtccaggactcagagtgctatatttagaatgaaggactctgctctcattcaaaac
atatttgatccatctaatcactcaactcacataacacagaatgctcatatctcaaaagat
aagacttctccaaaagcagaagagagaaaaaattttcaaatcagatatttgccaccagct
gggaaattaaatgaaactcgtgactctctggacacagcaaagatggatcaattacatacc
actaactatttgcattgtaaagacaataatcaacagcagattttttgtttaccagacgca
tccaagcattctgatccttgttcttctattcttaagccatctgaggaaaaccctgggcca
cttcaactgcctaaaaactgtttagtaacatctttgaagagtccaatgaagcagttaaat
tgcgatcaaaaccagagagggtttattttggatatgtcacattttaaaccagaaaccaca
aaacaaaggcctctgtcagaaacaaccatgcaaccaaaacccatctcccagtacaaaaac
aggaatatagtggccccatcagcatttggtgaaggacagtctggtctggctgttttgaaa
gagttgctccagaagagacagcagaaagctcagaatgccagtattgcacaggagccattg
ccagacaaaacgcagctgagcaagggcataccatgccctcttgaacagaataaagccatc
aaaaggtcacgaccagtcacatcatcaagaaaatctcgttctcccaggagcacaaaacct
aaagaaaaaacagcaaaacttgcaaaaaaggagtcttcaagccagccgatgactaatcgc
actgatcattctgtatctaatgacagccccattttcttttcagaccctggttttgaaagc
tgctactcacttgaagacagcttatctccagaccacaattacaactttgatattaatact
atagggcaaagtggattttgcagtttttattctgcaagccagtttgtcccagcagatcag
aatttgccccagaaattcttgagtgatgcagttcaggatcttggttctggacaaacaaca
gaaggtgactttctatgtcataatgaccaaaaatctgaggaagaaaagcaacattcttca
agcacaaataaatggatacggtctggttccctgagccctgagctttttgagaagacctcg
ctagataatagtgagaaccactgccatagtcaatggaggaaaaacattcattcttcaact
tctagatctagttttattgatacctcttgtacccaagagactgaagtctgtttaaatgaa
aagttcaaattgaatataaatacagtaaataaagagagatttcttaatctttctcagcca
acctgctcagactggattcaaagccaccttagaaaagaaaccacttttgaaccttgtcaa
ccacttgattcagttaatacctcttttacatccttattgtcatcacctgatggtgaactt
ctagatgcagcttctgaggatttagaattacatgtttcaagaaacaatgaagcattaact
ccaactccagatagttcaccaagatcaaccagttctccctcacaatccaagaatggaagc
tttacaccacgtactgctcacattcttaagcctctcatgtccccacccagtcgtgaagaa
atcatggcaactttggtggatcatgatcttgcagaaacagtctatcaggaaccattctgc
agcaacccttcagatgctccagaaaagccaagggagattggagggcggcttctcacggtg
gaaaccagacttccaaatgacctccctgagtttgagggggacttctcattagaaggtcta
cgactctggaagactgcattttcagcaatgacagaaagtcctagaccaggatctcctcct
cattatggtcactctactgttcataaaagagaaagtaatagccataaaactagtgaagac
aaaaaaatagttataatgccatgcaaatgtgctccaagccaacagcaagttcagatatgg
cttcatgccaaagaagagtatgaacatttcaagaaattgcctaagaatcatcctgctgag
caggcaaaggcagatgagaatttcagctctgcagaattgtctgaggagaaatctatagaa
gtaataaaagtagctaaagatttgaatttgtctagcctggaagatgaaagacctattgtg
cctacaaagacttctcctgcctccgtggcagaaaatacgaaaacacaaaccaaggaaaac
tgtgataagtctataagcaccataggaacttctgtaaatactaaaaatgatgtagactct
aataaaacttcatgtgcaagcaagacacacactacttcagctctagaacatgataaggag
gaggaggaggaggaggaagattattatgtcagttacagttctccagattctccagtgctt
cctccttggcagcaggtggcatctccagatcctaaacagtccagtttagaagacacagag
tggaaaaatcagaatattattttgtcttctggggaaggaaacgatgttggaagtacacaa
aattctccatgcacccaggagaacattcggacatcctttgatacatccccacttccagtt
aacgaagatcctggaaattctgaatcagttcatctacatagtacacccattgtgcacaga
aaaagccaagatggaatacctgaagttcttggttttactcctttatctgcagtaccaaaa
gctcagaaactgagccacaagaggggaagtaatactgatggtcttcgaagagtacttcta
accacacaaatgaagaatcaatttgctgccctcggtgctccaaagaaagagacttcccag
attgaaggaccatctttaaataatacttacggttttaaagtcagtgtggaaaacctgcag
gaagcaaaatctttacatgaggtccagcaccttaccctcatcagtatggagttacatgct
cgaacaagacgagatttggaaccagatccagagtttgatccgatctgcgctttattctac
tgcgtctcatcagactcagcactgccaaatactgataaaaaagaaatcactggtgctata
gtgattgatagaggcaggacaccatcaagccaagggagcagagaccaagcccccttgctt
acaagatctggagttacaggactagaagtcagttacgctactgatgaaagaactcttttc
caggaagtagtgaatattgtaaaaagatatgacccagacattttgctaggctatgaagtc
cagatgcattcctggggatatctcttacagagggctgcagcactgaatgttgatttatgc
cagatgatttctcgtgtgccagatgaaaataaagagaacagatttgccactgagctggat
gaatacggagcggatacaatgagtgaaataaatattgttgggcgaattgtcttgaatata
tggagaatgatgagacatgaggtgaatctgacgaattacacttttgaaaatgtgggcttt
catgttcttcatcatcgttttcctttatttacgttccgagttctgtctgattggtttgac
aataaggcagatgtctacagatggaaaatggttgatcattatgttagccgggttcgtggg
aatctcctcttgttaaacaaactggatttgattgacagaacaagtgaaatggcaagagtt
tttggcattcagttcttacatgtattaacaagaggctcccagtaccgtgtggagtcggtg
atgctgcgcattgcaaagcccatgaactacattgctgtgactcccagtgtccagcagcga
gctcagatgaaagccccacagtgtgttcccttgatcatggagcccgagtcccgcttctac
agcaacgctgttcttgtcttggatttccagtccttgtatccttccattgtcatagcgtac
aactactgctattctacctgcctgggacatgttgagaacttaggaaagtatgatgcattc
aaatttggctgtacatctctgagagtacctcctgacttactctaccagattagacatgat
atcacagtgtcacccagtggagtagcttttgtcaagccatcagtaagaaagggtgtgctg
ccaaggatgctagaagaaatcttgaataccaggataatggtgaaacagtcaatgaaggcc
tataagcatgacaaggctgtgactcgaatgcttgaagctcgtcagttgggtcttaaatat
atagctaattttacttttggctatactgctgctaatttttctggaagaatgccatgcact
gagattggagacagcattgtccacaaagccagagaaacattggagcgtgccattaaactg
gtgaatgatacaaaaaaatggggtgctcacgttgtatatggtgatacagacagcatgttt
gtactcttgaaaggagccacaaaggagcagtcttttaagattggtcaagaaattgctgaa
gctgtaacagcaacaaatcccaagcctgttaaactgaagtttgaaaaggtctacttgcca
tgtgtcctgcaaactaagaagaggtatgtgggttacatgtatgaaacactggaccagaag
gacccagtatttgatgcaaaaggcatagagacagtccgaagggactcctgtcctgctgtt
tccaagatacttgagtgttctatcaagctgctatttgaaacacgggacataagtcagatc
aagcagtatgttcagaatcaatgcatgaagttactggagggaaaagccagcatgcaggac
ttcatctttgcaaaagagtacagagggagctcagcatacaaacctggagcatgtgtacct
gctctggaaatcaccaggaggatgcttgcctacgaccgtcgctcggagccgcgcgtgggg
gagcgcgtgccctacgtcatcgtgtacggcatgcccggcctgcccctcatccagctcgtc
cggcggccgctggagctgctgcaggaccccagcctgaggctcaacgccacctactacatc
accaagcagatcctgccccccctggccagggtcttctcactcattggcatagatgtcttc
agctggtaccacgagctgccccggattcagaaggctgcctcagctgcccacactgagctg
gagggacgcaagggcaccatctcccagtatttcacgaccttacactgtcctgtgtgtgat
gaactgacccagtatgggatctgtaataaatgcagaagccagccccagcatgtggcagtg
attctcaaccaagaaatccgagagctggagcgtaaacaagagcagctggtccagatatgc
aggaactgcacgggctgcttcgaccggcacatccagtgtgtctccctcaactgccccgtg
cttttcaagctctccagagtgagcagagaactgtcaaaggcaccctatctccgccagctg
cttgaccagttttaa
DBGET
integrated database retrieval system
