Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445529
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Entry
135445529 CDS
T09958
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135445529 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135445529 (HBS1L)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135445529 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
Astrovir_pp_1
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
135445529
NCBI-ProteinID:
XP_064564175
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Position
3:complement(49393061..49452068)
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AA seq
676 aa
AA seq
DB search
MLIDFEDDDVYGQSVEDDYCISPSTAAQFIYSRRDKPATFAEPLDEEYGCEGTDAAADGF
TPTHQLTEVDRARLNSCLDQMREVLAESIPEQTMVQAVLDAKFDVQKALDLVLSQGSKQN
VKTKNKDAVILAKTTKGKTRDSQSPRMESEIVPKIAKMTVSGKKQSMGFEVPCAIAEENG
HTNTPQKGLLAEDASVASGVLEAVSKSTPSPQVVQVSEEQNMVPTPGKKSSKAKPQIDVK
AELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFA
YAWVLDETGEERERGVTMDVGMTKFETPTKVITLMDAPGHKDFIPNMITGAAQADVAILV
VDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLGQF
LKQAGFKESDVAYIPTSGLGGENLVTRGQSSDLTQWYKGKCLLEQIDSFKPPQRSVDKPF
RLCVADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHDEPVDWAAAGD
HVSLTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKGFPVLLHYQTVS
EPATITRLLSVLHKSTGEVTKKKPKFLAKGQNALIELQTQRPVALELYKDFKELGRFMLR
YSGSTIAAGVVTEIKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgttaatagactttgaagatgatgatgtgtacggccaatcagtagaagatgattattgc
atttctccttcaacagcagctcagtttatttactccagacgagacaaaccagccacattt
gctgagccattagatgaagaatatggctgtgaaggtactgatgctgctgctgatggtttt
acacccactcatcagttgactgaagttgatagagcccgtcttaattcatgccttgatcaa
atgagagaagttttggcagagtccataccagaacaaacaatggtgcaagcagtcctggat
gctaaatttgatgtacagaaggctttggatcttgtgctttcacaaggcagtaagcaaaat
gtgaagaccaagaataaggatgctgtgattttagcaaagactacaaaaggaaaaacaagg
gattcccagtcacccagaatggaatctgaaattgtgccaaaaattgccaaaatgacagtg
tctggaaagaaacaatctatgggatttgaagttccatgtgcgattgctgaggaaaatggc
cacactaatacacctcagaaaggactgttagctgaagatgccagtgtagcttctggagtg
cttgaggctgtctcaaaatctacaccttcaccccaggtagtgcaggtttcagaagagcag
aatatggtgcctactccaggaaaaaagtcaagcaaggcaaaaccacaaatagatgtgaaa
gcagagttggagaagagacaaggaggaaagcagctgctgaatttggtggtaataggacat
gttgatgcaggcaaaagtactttaatgggtcatttgctctaccttttgggaaatgtgaac
aaaagaactatgcacaaatatgaacaggaatctaaaaaggctggtaaagcttcatttgcc
tatgcatgggtcttggatgaaactggtgaagaaagagaaaggggagtgacaatggatgtg
ggtatgaccaaatttgagacaccaactaaagtaattacattgatggatgctccaggccac
aaagacttcattccaaatatgatcacaggagctgcgcaggctgatgtggcaattctggtt
gtggatgccagcagaggagagtttgaggcagggtttgagacaggtggacagactcgagaa
catggattattagtgcgctctcttggagtgacacagttggctgttgcagtcaataaaatg
gaccaggtcaattggcaacaggaaagatttcaggaaattacaagtaagcttggccaattt
cttaagcaagctggctttaaggaatcagatgtggcttatatcccaacaagtggccttggt
ggagaaaatctagtcacaaggggtcagtcaagtgacctcacacaatggtataaaggaaag
tgtttgttggagcaaattgattctttcaagccaccacagagatcagtggataaaccattt
agactgtgtgttgctgatgtttttaaagaccaaggttcaggattttgtgtgactggtaaa
atagaagcaggctatattcaggttggagagcgacttctggcaatgcctcccaatgaaact
tgcactgcaaaaggaatcacactgcacgatgaaccagttgattgggctgcagcaggagat
cacgttagtctcactttgaccggcatggatatcatcaaaatcaatgtgggctgtgtattt
tgtgatcccaaggagcccattaaagtttgcactcggttcagagctcgggttctcatcttc
aatattgaggttccaatcactaaaggatttcctgtgcttttacactatcaaacagtaagt
gaacctgctactattacaagactgttgagtgtcctgcacaaaagtactggtgaagtgaca
aagaaaaaacctaagttcttggctaaaggccagaatgctctaatagaactacagactcaa
agacctgttgctctagagttatacaaagattttaaagagctggggagatttatgttacgc
tacagtggttccactattgctgcaggagttgttacagagattaaagaatga
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