Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445579
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Entry
135445579 CDS
T09958
Symbol
TULP4
Name
(RefSeq) tubby-related protein 4 isoform X1
KO
K24720
tubby-related protein 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zle04990
]
135445579 (TULP4)
Domain-containing proteins not elsewhere classified [BR:
zle04990
]
Other domain-containing proteins
Tubby family proteins
135445579 (TULP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_RIG_2nd
SOCS_box
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
EIF3I
DUF3527
Motif
Other DBs
NCBI-GeneID:
135445579
NCBI-ProteinID:
XP_064564305
LinkDB
All DBs
Position
3:53553729..53708769
Genome browser
AA seq
1572 aa
AA seq
DB search
MYAAVEHGPVLCSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRRDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILNMSWNYPSFLVEDSSESDTDSDDYSPP
QDGPAAYPVPVQNTKPLLTVSFTSGDISLMNNYDDLSPTIIRSGLKDVVVQWCTQGDLLA
VAGMEKQNQLLDLSNGSLLKSALVKFYNVRGEHIYTLETPVQRPIISICWGHRDSRLLMA
SGPALYVVRVEHRVSSLQLLCQQTIASCLRDDKDISKLTLPPRLCSYLTTAFIPTIKPPI
PDPNNMRDFVSYPTAGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPKTDGKADEIYGNSLISTVIDSCNCSDSSDIELSDDWAAKKSPKISRASKSP
KLPRINIEARKSPKMSRAAQEISRSPRLPIRKPSIGSPSLTRREFPLEDITQHNYLAQVT
SNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISMDYINMPVFNP
NVFSEDEDDLPVPGAPGAPASSPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ
LDVLANPPAEAGGEGPGPFPGAPGRFPGPGAGALAVGELGRPAPPPLAPPPPAPPAIALA
DLRDHGDREHEPPPKAKAPRPGPPLVEGDAVIFGAAQELQLNKMNPPPPYPGTIPAVPAT
PLPPPPGPPQPPLDLCLKKGEFSLYPAGHYQTPLGYERITTFDSSGNVEEVCRPRTRMLC
AQSTYTLPGPGSSATLRITAAEKKMQQPCASATLNRLTVPRYSIPAGDPPPYPDIASQLS
QGRNMAQRLDSSIIHATLRRNSREAALKMAQLMDGQRATLQLPPKAKSNIVSAQYQQRVP
TALYTCSQCSSGGTGSSSSSASAGGAGNIAGANAGSSTSSIGAMRPDLSTGSGSQHSSVI
AHSVSTSPLASQSSYSLLSPPDNSRDRADYINSAFTEDEALSQHCPVEKSVRHVPVSLTE
ATLSVKRPPPYQWDPMVSEEIWVPQERTSQSSVPNPLKPPPLIIGQAQHLDMSRVPFVSP
KSPTSPTATFQTSYGVGVPYPGSYSAPPLQGMQAPCSPKEALAPTQFAQQEPSVVLQPGY
SSNLPYCPLPPMYPGSSTCSSLQLPPIALHPWSSYSACPPVQNPQGTLPPKPLLVVEKPV
MSPPPAELQGHVGTEVMVETADTFQEVLSLTESPVPQRTDKFGKKSRKRLDSRAEEGNVQ
AITEGKVKKEARTLTDFNSLIASPRLGREKKKVKSQKDQLKSKKLNKTNEFQDSSESEPE
LFISGDELMNQSQGSKKGWKTKRSLRTASELDEFKCRKASEKEDGRLGSQGFVYVMANKQ
PLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYILDFQYPFSAVQAF
AVALANVTQRLK
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcagcagtggaacatgggcctgttctttgcagcgattccaacatcctctgcctc
tcctggaaaggcagagtccccaaaagtgagaaggagaaaccagtgtgcaggaggcggtac
tatgaggaaggctggctggcaacgggcaatggcagaggagttgtgggcgtcactttcact
tccagccattgcaggagggaccggaacacccctcagagaatcaacttcaatttgaggggc
cacaacagtgaggttgtgctggtgaggtggaatgaaccattccagaaattagcaacctgc
gatgcagatggaggaatatttgtttggatacaatatgaaggcagatggtctgtggagctc
gtgaacgatcgtggggcacaggtgagcgactttacgtggagccacgatgggactcaggca
cttatctcctatagagatggatttgtgctggtcggttcagtcagtggacaaagacactgg
tcttcagaaataaacttggagagtcagatcacctgtggcatatggactccagatgaccaa
caggttctgtttggcactgctgatggacaggtgattgtcatggactgccacgggcgcatg
ctggcccacgtgctccttcacgagtcagatggcatcctcaacatgtcctggaactacccc
agcttcctggtggaggacagcagcgagagcgacacggactccgacgactactccccacca
caggatggcccagctgcctatccagtgccggtgcagaacaccaagccactactgactgtc
agcttcacgtcaggagacatcagtttaatgaacaactacgatgacttgtctcccactatc
atccgctcggggctgaaagatgtggtggtgcagtggtgcacacaaggagacctgctggca
gtggcaggcatggagaagcagaaccagctgcttgacctcagcaatggctccctgctgaaa
agcgccctggtcaagttctacaacgtgcgtggggaacacatctacaccctggagacacct
gtgcagcgtcccatcatctccatctgttggggtcacagggattcccgcctgctgatggcc
tctgggcccgcgctgtacgtggtgcgagtggagcacagggtgtccagcctgcagctgctg
tgccagcagaccatcgccagctgcctgcgggatgacaaggacatcagcaagctgaccctg
ccccctcgcctctgctcgtacctcaccactgccttcataccaacaatcaagcctccaatc
ccagacccaaacaatatgagagattttgtcagctacccaacagctgggaacgagcggctg
cactgcaccatgaagcggacggaggatgacccggaggtcgggggtccctgttacacactg
tacttggaatacctgggggggctggtgcccatcctcaaaggacgtcggatcagcaagctg
cggccggagtttgtcatcatggatcctaaaacagacggaaaagcagatgaaatctatgga
aacagcttgatttccactgtgattgacagctgcaactgctctgactccagcgatatcgaa
ctcagcgatgactgggcagcaaagaaatctccaaaaatcagccgagctagcaaatcacct
aaactccccagaatcaatatagaagctcgcaaatctcccaagatgtcacgagctgcacag
gagatctcaagatcaccaaggttaccaataaggaaaccctctattggttctccaagcctg
acacgaagagagtttcctttagaagacattactcagcacaactaccttgctcaggtcaca
tctaatatctggggaaccaaatttaaaattgtgggtttggctgctttcctaccaactaac
cttggtgcagtaatatataaaaccagtctgctgcatctgcagcccaggcaaatgacaata
tatctcccagaagtgaggaagatttcaatggactacattaacatgcctgtctttaatcca
aatgttttcagcgaagacgaagatgatctaccagtgcccggcgcccccggcgcgcccgcc
agcagcccgccctgcaccgtcaacatccccatcgcgcccatccacagctcggcgcaggcc
atgtcgcccacgcagagcatcggcctggtgcagtcgctgctcgccaaccagaacgtgcag
ctggacgtgctggcaaacccgccggccgaagcgggcggcgaggggccggggcctttcccg
ggggctccgggccgctttcccggccccggggcaggcgcgctggccgtgggcgagctgggc
cgcccggccccgccgccgctcgccccgccgccccccgcgccccccgccatcgccctggcc
gacctgcgggaccatggcgaccgcgagcatgagcccccgcccaaggccaaggccccgcgg
cccgggccgccgctggtggaaggggacgccgtcatcttcggggccgcccaggagctgcag
ctgaacaagatgaacccgccgccgccctaccccggcaccatccccgccgtgcccgccacc
cccctgccgcccccgcccgggcccccgcagccgcccctcgatctctgcctcaagaagggc
gagttctccctctacccggcggggcactaccagacgcccctgggctacgagcggataacg
acgttcgacagcagcgggaacgtggaggaggtgtgccggcctcgcaccaggatgctctgt
gcccagagcacctacaccctgccgggccccggcagctccgccaccttgcgcatcacggct
gccgagaagaagatgcagcagccctgtgccagcgccaccttgaaccggctcacggtgccc
cgctactccatcccggccggggacccgccgccctatcctgacattgccagccagctgtcc
cagggcagaaacatggcgcagaggctggacagcagtatcattcatgctactctgcggagg
aacagcagagaggcagccctgaaaatggctcagctgatggatggtcagagagccaccctg
cagcttccccctaaggccaagagcaacattgtgtcagcacagtaccagcagagagtgccc
acggccttgtacacctgcagccaatgcagcagtggcggcactggcagcagcagcagcagt
gcgagcgctggtggcgcgggcaacatcgctggtgccaatgctggtagcagcacttccagc
attggtgccatgagaccagatctgagcacagggagtggctcccaacacagctctgtcatt
gctcactctgtcagtacttcgcctctggcctcccagtcctcctacagcttgctgagcccg
cctgacaactcccgtgaccgagcggattatatcaactccgctttcacggaggatgaggcc
ctttctcagcactgcccagtggagaaatcggtacggcacgtacctgtgtccttgacagag
gctaccctgagtgtaaaacggccgccgccgtaccagtgggatcctatggtgagcgaagag
atctgggttcctcaggaaaggacatctcagagctcagttcccaaccctctaaaacctcct
ccgctcatcattggtcaagctcaacatctggatatgtctcgagtgccatttgtttccccc
aagtctccaaccagtcccactgccacttttcagacaagttatggggttggagtaccttac
ccaggaagctacagcgccccaccccttcagggaatgcaggccccctgctcccccaaagaa
gctctggccccaacacagtttgcacagcaggagccctcagttgtgcttcagccaggttac
tcatccaacctcccctactgccctttgccgcccatgtacccgggaagcagcacttgctct
agtttacagctgccaccgatcgccttgcacccctggagctcctacagcgcctgcccgccc
gtacagaacccccagggcacgctgccccccaagccgctcctcgtggtggagaagccggtg
atgtctcccccgccagcggagctgcagggccatgtgggcacagaggtaatggtggagacg
gcagacactttccaggaggtgctctccttgacagaaagccctgttccccaaaggacagac
aaatttggtaagaagagccggaaacgcctggacagtcgagccgaggaaggaaatgtgcag
gctatcactgagggtaaggtcaaaaaggaggcaaggacactgactgacttcaattcactg
atagccagccctcggctggggagggagaaaaagaaggtcaagagccaaaaagatcagctg
aagtccaagaaactaaacaagacaaatgagtttcaggacagttcagagagtgagccggag
ctttttatcagcggagatgaactgatgaaccagagccagggcagtaaaaagggttggaaa
actaaaaggagtttgaggacagccagtgagctggatgaattcaagtgccggaaggccagt
gagaaggaggatgggcgcctgggaagccaaggctttgtgtatgtgatggccaacaagcag
ccgctgtggaacgaggcaacacaagtctaccagctggacttcggagggcgggtgacccag
gagtcagcaaaaaacttccagattgagctggaaggacgacaggtgatgcagtttggaaga
attgatggcaatgcttacattttggactttcagtatccattttctgcagtgcaagccttt
gctgttgctctggctaatgtgactcaacgcctcaaatga
DBGET
integrated database retrieval system
