Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445646
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Entry
135445646 CDS
T09958
Symbol
HEATR1
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135445646 (HEATR1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zle03009
]
135445646 (HEATR1)
Ribosome biogenesis [BR:
zle03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135445646 (HEATR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_2
HEAT_EZ
HEAT_GCN1
HEAT_MROH2B_C
TOR1L1_N
CLASP_N
HEAT_EF3_N
RTP1_C1
TPR_IMB1
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
135445646
NCBI-ProteinID:
XP_064564542
LinkDB
All DBs
Position
3:61752645..61787570
Genome browser
AA seq
2156 aa
AA seq
DB search
MTSLAEQLKRLALPQTDPSLLDRSEVASLLFTCKEAATIDRDTFFAIGCTGLEELMGIDP
SFEEFQSSLFSSTAKGLERSVQTKAVNQQLDKNISLFLIHLSPYFMLKPAQKCLEWLIQR
FHIHLYNQDSLIGCVLPYHETNLFVRVIQLLDIKSPTHKWHWMDPIRKPGVPLARGTVIT
HCYKDLDFMDFICRLVARSVKVFSECPGNSAQLRVLLVFYASTIVSALGAAEKITDTMVS
LLLPYVQKGLKSSVQDYRAATYMIICQMTVKVTVETSLVHSLMVQISKTLFKMPSLIRDG
LACLNLLLQTQKGDKLGKKPFNYLCKSPELVTFLHGLSAGYDISPLLHYLLPHLVHTIMK
SDTEEQEESEETENDIYIKHLQAILESIPLEKDLDSLLATKFLEEFISCGTEVESNPTKM
AALNQKILPLIRLLERKYPKALDSVLEKHLEDCANEADQNLFHQFISLSLSCGKYEFLEV
CETSLLLSLNHPQPAVRVLALQHLKDVIETSKEGFDQAFLQEAIFGRLKDDNRDVVMAAL
SSLEIFIEQVNPEVLVSSLLNIFQKADLSKDGKWYKVLEQTVKILVKEEILKEKKELLDA
AVMQLLPFMIITNANSKSADWKMAVCLSQSGLCSLHPFLKGWPEALEEAIKSTESAELVG
VANKKMIGLLSRNLTSEDPSLLLQMVDDLILVAETESDSVRQKVTTHIIGAVLVQRCCNA
RRKENYLPVAIRVLRFLDKKIKNLRSCEPAEETPLSWSVETVEDTLVPEDLLIAYIEKLK
SDETAHAEESAIVLFLLKNFIKGLKIPMSFVKEIYWWNPESLKQDSRDYLHIILGLFDLL
VSGASEGRDALQYRALMNLLFKEHLENSKLLFKFLSILWSYNYNLSNQLNYEVSAMLQTQ
ALYIGYALLESQADQNKKRLLSPSSPVVVSLLINLASPVSEVRRAALNCLHSLGGIKESL
FHPVLQHLEQKTEEIVSDPTYIAQIMGTLFEDIETQSKQKPQKKELLAALENILDCVQNR
IFPSYIARNLMKILHEVHGEVVLSHLLPVLERLLEKVSDNAEAMFKDEVILLHLILGKFN
EYSATLLSKNDDSLDLFIKSLHAAKKIYEEIPPFQITALGQITKPFFAAVSDGMVQQKLL
KVLFDLLLDCKNPLCAQTISSVFKGITVCAEQIVKELEPPEKTKNLATVQQTRRQKMQQQ
RRPQGAELAPATKHSSWQRVMLILELLQHKKKLRHPQALVPALFNLLSRCLERAASKEEN
MEYTKQLILSCLLNICQKLSSDGSKVPADILDKEKFSVELIVQCIRYSKMPQTHHHCLLL
LSAVAGIFPDKVLHNIMPIFTFMGANVLRLDDTYTFQVINKTVQMIIPALIQAEDSDLSE
SSGSVEEVVIKVIRVFVDALPHVPEHRRLPILSQLITTVGGDKFLWVLLVLLFEQYVTKT
VTATPSTDKDAVLEADTEFWISICCEFNVCSQFQSVMKIIQYLTELPENKEDDPGTKKLT
CKTKPKNQEGQLFNVESHSDKQLRHFKFLSVSFMSQLLSSQSFVKKIVEYEEPEELQELE
QRLLEEVLQYINTVASSVEGNVDKPTAKFWRVLLSKCYDMLDKVNALLPTETFIPVIGGL
MMNQLPSVRRKAMDLLNNKVQQRTKWHKSQILQLLELVPELIAIVKCRRKEEEEEQAINR
QTALFSLKLLCKGFGTENPAPFVPVLKTAIDLISSEKEEKNVMGSALLCIAEVTCTLKAQ
AIPQLPRLMPALLKTLKSKKELVSNEIYLLSAITALLKVAETLPHFLSPYLLECLLQVVR
LEKIVAEFGPTSQISVRVAALKSILATRLAPRILLPAVTKCYSEVLHTRKNCLSPLMNIL
KEHITGMEKEHLISHQPELTAFFMKVLDFRTEHAEDDLEEVGKIEAYIIDCLISMVMKLS
EASFRPLFFKLFDWSKTEAALRDRLLTFHRIADCIADKLKGLFTLFAGHLVKPFAETLNQ
VNISKTDEAFFDSDNNTEKSCLLLQFTMDCLHKLFLFDTQKFLSKERAETLMQPLVDQLE
NVLGGDEKFQERVTAHLIPCIAQFSVAMADDSLWKPLNYQILLKTRHSSPKVRFAALLAL
IEVAQKLKENYLVLLPESIPFLAELMEDECEEVEQQCQKTIQQLEVILGEPLQSYF
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccctggcggagcagctgaagcggctggcgcttccccagaccgatcccagcctc
ctggaccgcagcgaggtggcatcgctgctcttcacctgcaaggaagccgcgaccattgac
agggacacgttctttgccatcgggtgcactggcttagaagagctgatgggcattgatcct
tcatttgaagagttccagtccagtttgtttagttccacagccaaaggccttgaacgcagt
gttcagactaaagcagtaaatcagcagctggataagaatatttcattgttcctcattcac
ctgtccccctacttcatgcttaagccagcccagaagtgccttgaatggctgattcagaga
tttcacattcatctctacaatcaagacagtttgattggttgtgttctgccatatcatgag
actaatctatttgtgagagttattcaacttttagatataaaaagcccaactcataagtgg
cattggatggatccaatacggaaacctggagtccctctggcaaggggtactgtcattaca
cactgctacaaagacctggatttcatggatttcatctgcaggctggtggcaagatctgtg
aaggtcttttcagagtgtcctggcaactcagctcaactgagagttctccttgtgttttat
gcttccaccattgtgtcagctcttggagctgcagagaagataacagacactatggtctct
ctgctgcttccttatgtccaaaagggcttgaaatcctctgtacaggattacagagctgca
acatacatgataatctgccagatgacagtaaaagtgacagtggagacttccttggtgcat
tccttgatggtgcagataagcaagacactatttaaaatgccctcattaatcagggacggg
ctggcttgcttgaacctacttctgcaaactcagaaaggagataaacttgggaaaaagcca
tttaattatctgtgcaaaagcccagaactggtaacatttttgcatggcctgtcagcaggc
tatgatatctctcctctcctccactacctgttgcctcaccttgttcacaccatcatgaaa
agtgatacagaggagcaagaagaatccgaggagacagaaaatgacatttatatcaagcat
cttcaagctattcttgagagtataccactggaaaaggatttagattccctgttggctacc
aagtttcttgaagagtttatctcctgtggcacagaggttgaatctaatcccaccaaaatg
gctgcactcaatcaaaagatccttcctctcatcagacttctcgagagaaagtatcctaaa
gccttagactctgtgttggagaagcacctggaagattgtgcaaatgaggctgaccaaaat
ctttttcatcaatttatttctctttcattaagctgtggcaagtacgagtttctggaagtc
tgtgaaacctcccttctgcttagtttgaatcatcctcagcctgctgtgcgggtcctggct
cttcagcatttgaaagatgttattgaaacttcaaaggaaggctttgatcaggcattttta
caagaagcaatttttggacggctcaaggatgacaacagagatgttgtgatggctgctctc
agttctttggagattttcatagaacaagtcaatccagaagtattagtatcaagtcttttg
aacattttccagaaagctgatctttcaaaggatggaaagtggtacaaggttttggagcaa
acagtaaaaattttagtcaaagaggagattttaaaagagaagaaagaactgctagatgca
gcagtaatgcagttgttaccttttatgataatcactaatgcaaattcaaaatctgcagac
tggaaaatggctgtttgtttgtcacagtctggtctctgctctttacatcctttcctgaaa
ggctggccagaagctcttgaagaggcaattaaatctactgagtctgcagagttggttgga
gtggccaataagaaaatgattggtctgctttctcgaaatttgacatcagaggacccttcc
ttactattgcaaatggttgatgacctgatacttgttgctgaaacggaatctgacagtgtg
agacagaaagtaactactcatataattggtgcagtgcttgttcagcgctgctgcaatgca
cggagaaaggaaaattatcttccagtggctatcagagtcctccgcttcttggataaaaaa
attaagaatctcagaagttgtgaacctgcagaggaaactcccctaagctggtctgttgaa
acagtagaggacactttggtgcctgaggacttgttaattgcatatatagaaaagctcaaa
agtgatgagactgctcatgcagaggagtcagcaatagttctgttcttattgaaaaacttc
attaaaggcctaaaaattcccatgtcctttgtaaaagagatatactggtggaatcctgaa
tctctgaagcaagatagccgagactacctgcacatcattttggggctgtttgacctgctt
gtcagtggagctagtgagggaagagatgctcttcagtacagagcattgatgaatctctta
ttcaaggagcatctagaaaattcaaagcttctcttcaaattcctttccattttatggagt
tacaattataacctttcaaatcaactgaactatgaagtcagtgcaatgctacagactcag
gctctgtatattggctatgcactgcttgaatcacaagcagaccagaacaagaaacgactg
ctatcaccatcatctccagtggtggtatctttgctaattaacttggctagtcctgtgagt
gaagttcgaagggctgctctcaactgcctccattccttgggaggaataaaggagtctctg
tttcatcctgtccttcagcatttggagcaaaagacagaagagattgtatctgaccctaca
tacatagcacagattatgggaactctatttgaggatattgagacacagtcaaaacagaaa
ccccagaaaaaagaattgttggcagctttggaaaacatacttgattgtgtacagaaccgt
attttcccatcatatattgcaagaaacttaatgaaaattcttcatgaagtccatggtgaa
gtggttctctctcacctcttgcctgtactagagcgtctgctagagaaggtctctgataat
gctgaggcaatgtttaaagatgaagtcattctcctgcatctaatccttggaaagtttaat
gaatattcagccaccctcctgagcaagaatgacgatagtctggatttatttatcaaaagt
ctgcatgctgccaagaaaatatacgaagaaattccaccatttcagatcacagcacttggg
cagattactaagccattctttgcagctgtttcagatgggatggtgcaacagaagctacta
aaagtattgtttgacttactcttagactgtaagaacccactttgtgcccagacaatcagc
agtgtgtttaaagggattacagtgtgtgctgagcagattgtcaaagaactggagcctcct
gagaaaaccaaaaatctggccactgttcaacagactagaaggcagaaaatgcagcaacag
agaaggcctcaaggtgcagaattggcaccagcaacaaagcactctagctggcagagggtg
atgcttattctggagttactgcagcataagaagaagcttcggcatccgcaggcattggtg
cctgcacttttcaaccttctgagcaggtgtctggaacgggcggcatcaaaagaagaaaat
atggaatatacaaagcagctgatcctcagctgcctgctgaacatctgtcagaaattgtca
tcagatggtagcaaggtcccagcagatatcctggacaaagaaaaattcagtgtggagctg
atagttcagtgcatcaggtattctaaaatgccccagacacaccaccattgtctgctgctc
cttagtgctgttgctggaatatttcctgataaagttcttcacaacatcatgcccattttt
acattcatgggagcaaatgtcctgcgtctggatgatacctacactttccaagtcattaac
aagacagtgcagatgattattcctgctcttatacaggctgaagacagtgacttgtcggag
tcctcgggaagcgtggaggaggtggtgatcaaggtcattcgcgtgtttgtggatgccctg
ccccacgtgccggagcaccggcgcctgcccatcctgtcccagctgatcactacggtggga
ggagacaaattcctctgggttctcctggtgctgctcttcgagcagtacgtgaccaaaact
gtgacagcgacaccaagcacagacaaggatgctgttctggaagcagacactgaattttgg
atttccatctgctgcgaatttaatgtatgttctcagttccagagcgtgatgaagataatc
cagtatctgacagagctgccagagaataaagaagatgatcctgggacaaagaagttaacg
tgtaagacaaagccaaaaaatcaggaggggcagctctttaatgtggaatctcactccgac
aaacaactccggcatttcaaattcttgtcagtctccttcatgtcacagcttctgtcttct
cagagttttgtgaaaaagatagttgaatatgaagaaccagaagagctgcaggagttggaa
cagaggctgttggaagaagttcttcagtacataaacactgtggcatcttcagtggaagga
aatgtggacaagccaacagccaaattctggagggttctgcttagcaagtgctatgatatg
ctggataaagtcaatgccttactgccaacagaaaccttcatccctgtgattggggggctg
atgatgaatcagctgccgtcggtgagacgcaaggccatggacctcctgaacaacaaggtg
cagcagcgcaccaagtggcacaagagccagatcctgcagctcttagagctggttcctgag
ctcattgccattgtcaagtgcagaagaaaggaggaagaggaggagcaggccatcaacagg
cagactgctttgttcagcctcaagctgctctgcaaaggttttggcacagaaaatccagcg
ccatttgtgcctgttctgaaaacagccattgatctcatttcttcagagaaggaagaaaaa
aatgtgatgggaagtgctttgctgtgtatagctgaggtcacctgtacactgaaagcccaa
gcaatacctcagcttccaaggctgatgccggcactcttgaagactttaaaaagtaagaag
gagctggtatccaatgagatttacctgctgagtgccatcactgctctgctaaaggttgca
gaaacactgccacacttccttagtccttaccttttggagtgcttgttgcaggttgtccgc
ttggaaaagattgtggccgagttcggtcccacttcccagatcagtgtccgtgtagcagca
ctgaaatccatcctagcgacgaggctggctccccgcatactgctgcctgcggtcaccaag
tgttacagtgaagtgctgcatacccgcaagaactgcctgagtccccttatgaacattttg
aaggagcacattactggtatggagaaggagcacctgatctcccatcagcctgaactgacg
gcatttttcatgaaagtcttggacttccgaacagagcatgccgaggatgatttagaggaa
gttggtaagatagaggcttacattattgactgtctaatcagtatggttatgaaactttcc
gaagcttctttcaggcccctcttcttcaagctctttgattggtccaaaacagaggctgcc
ctaagagacaggctgctgacattccaccgcatagcagactgcattgcagacaagctcaag
gggctcttcaccctctttgctggtcacttagtgaagccgtttgctgagacactgaaccag
gtcaacatttctaaaactgatgaagctttctttgactcagacaataacacagaaaagagc
tgtctactgttgcagttcaccatggactgtctgcacaagctcttcctgtttgacacgcag
aagttcctgagtaaagaaagagcagaaaccttgatgcagcctctggtcgatcagctagaa
aatgtgcttggaggagatgagaagttccaggaaagagtgacagcacacctgataccctgc
atagctcagttttcagtggcaatggcagatgattctctttggaaaccactgaactaccag
atcctgctgaagacaaggcacagttctcctaaggtccgatttgctgccctgcttgctttg
atagaagttgcacaaaaactgaaggagaactacctggtcctgctaccagaatctattcca
ttcttagctgagcttatggaagatgaatgtgaagaagttgaacaacaatgtcagaagaca
attcaacagctggaagtcattttgggagaaccactccaaagctacttctaa
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integrated database retrieval system
