Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445703
Help
Entry
135445703 CDS
T09958
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135445703 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135445703 (MID1)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135445703 (MID1)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135445703 (MID1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-RING_5
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
135445703
NCBI-ProteinID:
XP_064564655
LinkDB
All DBs
Position
1:20390628..20631029
Genome browser
AA seq
667 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDNNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSDRYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQETKLMEECDQLIEIIQQRRQIIGTKIKEGKVVRLRKLAQQIA
NCKQCIERSTSLISQAEQSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFTREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFCVVSYELQYTI
FTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSSEPGKLK
TNSQPFKLDPKSAHRKLKVSHDNLTVERDETSSKKSHTPERFTSQGSYGVAGNVFIDSGR
HYWEVVISGSTWYAIGISYKSAPKHEWIGKNSASWVLCRCNNTWVVRHNSKEIPIEPAPH
LRRVGILLDYDNGSLAFYDALNSLHLYTFDITFGQPVCPTFTVWNKCLTIITGLPIPDHL
DSSEQLA
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcagaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaactgcgcgcaccgcatcctggtctcc
cactgcgccaccaacgagccggtggagtctatcaccgccttccagtgcccgacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggtttcagaaagcctccgtcagcgggcccaactcccccagcgagacc
cgccgggagcgggcgttcgataacaacagcatgtcgtcctgcgagaaggtgctctgccag
ttctgcgaccaggaccctgcccaggaggcagtgaaaacctgtgttacctgcgaggtgtcc
tactgcgaggagtgcctgaaagccactcaccccaacaagaagcccttcaccggccaccgt
ctcatcgagcccatcccggactctcacatcagaggattaatgtgcttggagcatgaggac
gagaaagttaacatgtactgtgtgactgatgaccagttaatctgtgccttgtgtaaactg
gtcgggcgacaccgtgaccatcaggtggcagctttaagtgaccgctatgacaagctaaag
caaaatttggagagtaacctcaccaaccttattaagaggaacactgaactggaaactctt
ctggcaaaactcattcagacctgtcaacatgtagaagtgaatgcatcccgccaagaaacc
aagctgatggaagaatgtgaccaactcattgaaataatccagcaaagacggcaaataatt
ggaaccaaaatcaaagaaggaaaggtggtgaggctgagaaaactggctcagcagattgca
aactgcaagcagtgcattgagcgctcgacgtccctcatctcgcaggcggagcagtcactg
aaggagaacgaccacgctcgcttcctgcagactgccaaaaatatcactgaaagggtttcc
atggcaactgcatcctcccaggttctaattcctgaaattaatctcaatgatacttttgat
actttcgcacttgattttaccagagagaagaaattgttggaatgccttgattaccttaca
gctcccaaccctcccaccattcgggaagagctctgtacagcctcctatgataccatcact
gtgcactggacatcagatgatgagttctgtgtggtttcctatgagctgcagtacaccatc
ttcactggacaagccaacgttgttagtttatgcaactcagccgacagctggatgattgtt
cccaatatcaaacagaaccactacacggtgcacgggttgcagagtggcaccaagtacatc
ttcattgtcaaggccatcaatcaggctggcagccgcagcagcgagcctggcaagctcaag
acaaacagtcagccatttaaactggaccccaaatctgctcatagaaaattgaaagtgtct
catgataatttgacagtggagcgggatgaaacatcctccaagaagagccacaccccagag
cgattcacgagccagggcagctacggcgtggctggcaacgtcttcatcgacagcgggcgg
cactactgggaggtggtgataagcggcagcacgtggtatgctattggcatttcctacaag
tcagcaccgaagcacgagtggattggcaagaattctgcctcctgggtgctctgccgctgc
aataacacgtgggtggtgcggcacaacagcaaagaaatccccatcgagcctgcgcctcac
ctccggcgcgtcgggattttgctggactacgacaacggttcccttgccttttatgatgct
ttgaactccctacacctttacacttttgacattacatttggccagccagtgtgccccacg
ttcacggtgtggaataaatgtttgaccattataacaggcttgcccatccctgaccacctg
gactcctccgagcagctcgcgtga
DBGET
integrated database retrieval system
