Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445771
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Entry
135445771 CDS
T09958
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135445771 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135445771 (SPAST)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
135445771 (SPAST)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
135445771 (SPAST)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
135445771 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
Vps4_C
AAA_22
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_14
MIT
AbLIM_anchor
IstB_IS21
AAA_24
DUF815
NPHP3_N
nSTAND3
AAA_2
Motif
Other DBs
NCBI-GeneID:
135445771
NCBI-ProteinID:
XP_064564857
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Position
3:complement(72699224..72734652)
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AA seq
612 aa
AA seq
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MNSPGGRGKKKGSAGSSSAPPTAGTSPSSPPGPAPPVPPAGAAAAASPHKRNLYYFSYPL
FAAFALLRFVAFQLGLLFAWLCERLSRGALMAAKGSRAGAGEAPEPGGAPETVRACHKRA
FECISMALRIDEDETAGQKEQAVEWYKKGIEELEKGIAVLVIGQGDQCERARRLQSKMMT
NLAMAKDRLQLLEKLQAVLQISKPQMEVYNDSTNLACRNGHLQSESGAVPKKKDPLTHTS
NSLPRSKTVAKTGSTGLSGHHRTPSYSGVSSSVSRPAPNPTPSAHKAAPKNSRANKPSTP
TTAPRKKKDTKIFRNVDSNLANLILNEVVDSGPAVKFDDIAGQELAKQALQEIVILPSLR
PELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVR
ALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMG
ATNRPQELDDAVLRRFTKRVYVSLPNEETRLILLKNLLSKQGSPLTQKELAQLARMTDGY
SGSDLTALAKDAALGPIRELKPEQVKNMSASEMRNIKLSDFTESLKKIKRSLSPQTLEAY
IRWNKDFGDTTV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggcggccgagggaagaagaagggctcagccggctccagttccgcgcct
ccgaccgccggcacctctccctcctcaccgcccgggccggcgccccccgtgccgccggcg
ggggcggcggcggcggcgtccccgcacaagcggaacctgtactacttctcgtacccgctc
ttcgccgccttcgccctgctccgcttcgtcgccttccagctcgggctgctcttcgcctgg
ctctgcgagcgcctctcccgcggcgccctcatggccgccaagggcagcagggccggggcc
ggcgaggcgcccgagcccggcggggcgcccgagacggtgcgggcgtgccacaagcgggcc
ttcgagtgcatctccatggctctgcgcatcgacgaggacgagacagcaggacaaaaggaa
caagctgttgaatggtataagaaaggaattgaagaactggaaaaaggaatagctgtctta
gtaattggtcaaggtgatcagtgtgaacgggcacgacgtctccaatctaaaatgatgaca
aatttggcaatggccaaggatcggttgcagcttttagagaagctgcaggcagttttgcaa
atttccaagccgcaaatggaggtctataatgacagtactaacctggcatgccgcaatgga
catctccagtcagaaagtggagcagttccaaaaaagaaggaccccctaacacacacgagt
aattcccttcctcgttcaaagactgttgcaaaaactggatccacaggcctttcaggtcac
cacagaacgcccagctacagtggggtatcatcatctgtgtctagaccagcacctaatcct
acaccttcagctcacaaggctgctcctaaaaacagcagagcaaataagccttctactcct
accactgctcctcgaaaaaagaaagacactaagatatttagaaatgtggacagcaatctg
gctaatcttatcctaaatgaagttgttgatagtgggccagctgtcaaatttgatgatatc
gcagggcaggaactggctaaacaagctttgcaagaaattgttatccttccttctcttaga
cctgagttatttacaggtctgagagctcctgcacgtggtttattgctgtttggcccacca
ggaaatgggaagacaatgctggccaaagcagttgctgcagaatcaaatgctactttcttt
aacatcagtgcagcgagtctgacttcaaaatatgtgggtgaaggggagaaactggtgcgt
gcactatttgcagtagcgagagaacttcaaccttctataatttttattgatgaagttgat
agccttttgtgtgaaagacgagaaggtgaacatgatgctagcaggcgtctaaaaacagag
tttttaatagaatttgatggtgtgcagtcttctggagaggacagaatacttgtgatggga
gcaacaaacaggcctcaggagcttgatgatgctgttctcagacgcttcaccaaacgggta
tatgtgtctttaccaaacgaggagacaagattgattttgcttaaaaatcttctaagcaag
caaggaagtccattaacccaaaaagagttggctcaactagctagaatgacagatggatac
tctggaagtgacctcactgcattagcgaaggatgcagctcttggccccattcgagaatta
aaaccagaacaggtgaagaacatgtctgccagtgagatgagaaacatcaagctgtcagat
ttcacggagtctctgaagaagatcaagcgcagtttgagccctcagacgctggaggcgtac
atccgctggaacaaggactttggagacaccacagtgtga
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