KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445856
Entry
135445856         CDS       T09958                                 
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
  KO
K06237  collagen type IV alpha
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04382  Cornified envelope formation
zle04510  Focal adhesion
zle04512  ECM-receptor interaction
zle04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:zle00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    135445856 (COL4A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    135445856 (COL4A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    135445856 (COL4A2)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    135445856 (COL4A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zle04147]
    135445856 (COL4A2)
   00536 Glycosaminoglycan binding proteins [BR:zle00536]
    135445856 (COL4A2)
Exosome [BR:zle04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   135445856 (COL4A2)
Glycosaminoglycan binding proteins [BR:zle00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   135445856 (COL4A2)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 135445856
NCBI-ProteinID: XP_064565048
LinkDB
Position
1:25211734..25354988
AA seq 1715 aa
MDISQLPSARTFLCQDTGLLLILMEVVLSAVKVDAGGKKYTGPCGGRDCSGGCQCFPEKG
SRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKGERGYPGITGPKGEVGQRGVTGFPGADG
IPGHPGQPGPRGKPGHDGCNGTAGDPGDAGTPGFSGFPGSIGVQGPKGQKGEPYIVAPEI
ISRHRGEPGDSGIIGFPGPPGTLGIQGPTGPRGQRGRPGPPGPPGPPGPQGNRGLGFYGE
KGEQGSPGPPGPPGLPTRELTGVPPDKHKGERGDPGPRGEAGRPGVLLFPLQKGEEGVMG
YPGQRGLPGITGFPGLSGERGIPGYDGPPGGHGPRGSKGEPGEMGPPGPDSYFPSRIPRK
GARGDPGFPGASGLPGDRGDEGDRGLPGLPGFSDADGDKPGLPGEMGPKGEKGEIGSPAY
FAGPPGLPGKDGSPGIRGPPGPVGAPGPLFGLKGREGTPGRYGVQGFPGPRGQKGPKGEE
GDCTTCLLGEELRRGSTGPRGPPGFPGTPGQPGSKGEPGDQGPHGLPGFPGAKGYSGPAG
FPGRKGEKGDSLHITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDSLRGF
PGDPGYPGELGPKGFPGEAGPPGEGFPGPKGFRGPPGDQGQAGSPGSPGLPGLPGEPGQL
DCGQVIEDFPRGDGTEPIWSGAGCVRPPKGSQGRPGLPGATGAKGARGFPGDPGPMGFPG
LNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAPGPKGLPGDVF
GAAAGPRGDVGLPGFPGLKGAPGDQGVPGARGADGSPGSPGAKGDPGPQGLPGLMGLPGT
PGTRGFPGPPGNRGPDGGPGSQGPLGPPGARGEDGEQGFPGPVGLKGLSGDKGDMGHTGL
PGIRGVTGPPGISGMDGFPGDKGLKGSPGIDGFKGMTGLKGRPGIKGIKGEFGPFGAQGD
KGSQGARGFKGDRGDQGPPGEPPKLMPSMMMEVKGEKGDAGERGTKGFFGLKGSKGMPGL
PGKTGTPGSPGHPSYVAGVKGDIGAKGLTGVKGYPGPAGSPGIRGFPGTTGVRGEKGIPG
ISGHFGTPGSHGEIGDRGDTINLPGMPGLKGEVGVPGLTGIRGGVGPKGEGGDPGFPGIE
GLKGTQGVPGSVGQEGLPGLVGPPGQQGSPGTPGLTGQKGAPGWPGLPGQAGQPGFRGIS
GLHGLPGTKGLPGSPGPDGYGSAGFPGPVGDKGEAGEPSRVEGSRGPPGQKGERGVPGVP
GTFGIPGQEGFPGPPGISNISGYPGDKGSPGLDGVPGYPGPQGQPGTPAPPGSKGESGET
GRTGEIGPKGSRGDPGLSGRPGLPGFPGPKGPRGEQGVIGFMGTVGFPGDLGPIGPKGDR
GVTGFQGPPGSPGRAPDPPRLVAEQGSPGPRGSIGPQGSPGDMGPQGPPGDPGFRGSPGE
PGLQGRGGIPAPPGSRGEQGGMGFQGPVGFEGQPGRPGSPGPPGMPGRSVSMGYLLVKHS
QSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLSRFSTMPFLYCNPGDICY
YASRNDKSYWLSTTAPLPMMPVAEEEIRPYISRCSVCEAPAVAIAVHSQEASIPHCPEGW
RSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGARGTCHYFANKYSFWL
TTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMKNL
NT seq 5148 nt   +upstreamnt  +downstreamnt
atggacatctcgcagcttcccagtgcacgtactttcctttgtcaggatacggggcttttg
ctgatcctgatggaagttgtgctgtcagccgtcaaagtggacgctggtggaaagaaatac
acaggaccatgtggaggcagagactgcagtggaggatgtcagtgtttccctgaaaaagga
agccgtggccagccaggactccttggatcacagggattcactggaccaccgggattgatg
gggatcccaggagtgcaaggtcccaaaggtcacaaaggtgaaagaggatacccaggaata
actggacccaaaggagaagtgggacaaagaggagtcactggattccccggggcagatggc
attcctggtcatccaggccagccaggaccaaggggaaaaccaggtcatgatggctgtaat
gggacagcaggtgaccctggtgatgcaggaactcctggattctctggtttccctggtagc
attggagtccaggggcccaagggccagaagggggagccgtacatagtggcgccggagatc
atcagccgacacaggggagagcctggggattcagggatcattggttttccaggacctccg
ggtacgctgggtattcaaggacctacaggtccaagaggacagcgaggaagaccaggacca
ccaggacccccagggcccccaggaccacaaggcaacaggggacttggcttctatggagaa
aaaggtgaacagggctccccaggtcctccaggtccacctgggcttcctacaagagaactg
acaggtgtcccccctgacaagcacaagggtgaaagaggagatcctggaccaagaggagaa
gctggacgtccaggtgttcttctctttcctctccaaaaaggtgaagaaggggtaatgggc
tacccaggacaaaggggactgcctggcatcactggttttccaggactcagtggagaaaga
ggtattccaggatatgatggtccacctggtggccatggtcccagaggaagcaagggggag
cctggcgagatgggtcctccagggccagattcctatttcccttcccgcatcccgaggaaa
ggtgcaagaggtgatccaggcttcccaggcgcttctggactcccaggagacagaggagat
gagggagatcgtggattgcctggtcttcctggattttctgatgcggatggggataagcca
ggcttgcctggagaaatgggaccaaaaggtgaaaagggtgaaattggatctcctgcttat
tttgcgggaccgcctgggcttccaggcaaggatggctcacctggaattcgtggtccacct
ggtcccgttggagcccctggtcctctctttggattaaaaggacgagagggaacaccaggt
agatatggtgtgcaaggtttccctgggccaagaggacaaaaaggacctaaaggtgaagaa
ggggattgcactacatgccttttgggtgaggaactcagaaggggctctactggcccccgt
ggccctcctggctttccaggaacccctggccagcctgggagcaaaggagaacctggtgat
caaggaccgcatggtcttcctggcttccctggagcaaaaggatattcaggtccagctgga
tttcctggaaggaaaggagaaaagggagactctttacacataactacaaaaggcaccaaa
gggatccgaggagaccctgggctgcctggaatcagaggtgaggatggtttcccaggcaga
gatggattggatggtttaccaggacagcctggccttccgggtgattctctcagaggtttc
cctggtgatcctggttatccaggagaattaggcccaaagggctttccaggagaagcaggc
ccgccaggtgaaggatttcctggtccaaaaggcttccggggacctccaggtgaccaagga
caagctggaagcccaggatctccaggtctgcctggtctgccaggggagcctggccagcta
gactgtgggcaggtcattgaagactttcctagaggagatggaactgaaccaatatggtca
ggtgcaggctgtgtaaggccaccaaagggatcccaaggaaggccaggattgccaggagcc
acaggtgcaaaaggtgcaagaggattcccaggtgatccaggtccaatgggttttcctggg
ctaaatggtacacgaggtgatccaggtcgggaaggattcccaggtcctccaggtttcact
ggacccaggggagacagaggcccaaatgggctacctggactgcagggacacccaggcctt
actggaaaatctggagctccaggagcaccaggaccaaagggccttcctggtgacgttttt
ggagcagcagcagggccccgaggggatgtcggcctccctggcttcccagggctgaaaggt
gcaccaggagatcaaggagtaccaggagctagaggagcggatggtagcccaggttcgcca
ggagccaaaggagatccagggccacaaggtctccctggtttgatgggattaccaggaaca
ccaggaacacgtggattcccaggtccaccaggaaaccgtgggccagatggtggccctggc
tctcaaggacctctcggtccacctggtgctaggggagaagatggtgagcaaggttttcct
ggccccgtgggcctgaagggtctgtctggtgacaaaggtgacatgggtcacacgggactg
ccaggtatacgtggtgtgactggtcctcctggcataagtggaatggatggctttccagga
gataaaggcttgaaaggttcacccggcattgatggtttcaaaggcatgacaggcctaaaa
ggaagaccaggcatcaagggaatcaaaggagaatttggcccatttggggctcagggagat
aaaggctcacagggtgcccgtggcttcaaaggtgaccgtggggatcagggccccccagga
gagcctccaaagctcatgcccagcatgatgatggaagttaaaggtgaaaaaggagatgct
ggagaaaggggcacaaagggattctttggcttaaaaggtagcaagggaatgccaggcctt
cctggaaagacaggaaccccagggtcccctgggcatcccagctatgtggctggtgtgaaa
ggagacatcggcgcaaaagggctgacaggtgtgaaaggatatcctggtcctgctggttct
cctggcatcagaggcttccctggcaccacaggagtcaggggagaaaagggcattccagga
atttcaggccattttggtactcctggctcacatggagaaataggtgatcggggagacact
ataaacttaccaggaatgccaggcctgaaaggggaagttggtgtgccaggcttaacaggc
ataagaggaggtgtgggaccaaaaggagaaggtggtgatcctggtttccctggcattgaa
ggtctcaagggcacgcagggtgtccctggctctgtgggacaagaaggtttgccaggactg
gttggccccccagggcagcaaggaagccctggcactcctggacttacaggtcaaaaggga
gctcctggctggcctggcttaccaggacaagcaggccagcctggcttcagaggaatcagt
ggactgcatggtttaccaggcactaagggcttaccaggatcaccaggtccagatgggtac
ggctctgcaggtttcccaggtccagtgggggacaaaggagaagcaggagagccaagcaga
gtagaaggcagccgaggacctccaggccagaagggagagagaggtgttccaggagtccca
ggaacctttggtattcctgggcaggaaggatttccagggccccctgggatttcaaatata
tcaggatatcctggtgataaaggttccccaggtctagatggagtgccaggctatccagga
ccacagggccagcctggaacacctgctccaccaggaagcaaaggagaaagtggagaaaca
ggtaggactggagaaatcggcccaaaaggaagtagaggtgatcctggattatcaggaagg
cctggcctgcctggattccctggaccaaaaggtcccaggggtgagcaaggtgtcattggc
tttatgggcacggtaggatttccaggtgacctgggacccatcggacccaagggggataga
ggagtaacgggcttccagggacctccaggctctcctgggcgagcccctgatcctccaagg
ctggttgctgagcaaggttcaccaggtccccgtggaagtataggacctcagggaagccca
ggagatatgggacctcagggcccaccaggagatccaggtttcagaggctcaccaggagag
ccaggactccagggcaggggtggcattccagctcctcctggctccagaggggaacaagga
ggaatgggatttcagggtccagtgggatttgaaggccagccaggccggcctggcagccct
gggcccccaggcatgccaggccgcagtgtcagcatgggatacctgctggtgaagcacagc
cagtctgaccaagagcccatgtgcccagtgggcatgaacaaactctggagtggatacagc
ctgctgtattttgaaggacaagagaaagcacacaaccaggatctagggctggctggctcg
tgtttgtctcgctttagcaccatgccattcctctactgtaaccctggggatatttgctac
tatgcaagtcgaaatgataaatcctactggctctccactacagcacctctcccaatgatg
cccgtggcagaagaagagattaggccgtatatcagtcgctgctcagtctgtgaggcccca
gctgtggcaattgctgtccacagccaagaagcttctattcctcactgccctgaaggctgg
cgcagtttgtggatcggatattccttccttatgcacactgctgctggtgatgaaggcggg
ggacagtcgctggtttcccccgggagctgcctggaggatttcagggcgactcctttcatc
gaatgcaacggcgcccgcggaacctgccactactttgccaacaaatacagcttctggctc
accaccatcgaccagcccttccaaagcaagccctcgggagacacactcaaggcaggactc
atccgaagccacatcagcagatgtcaagtctgtatgaaaaacttatag

DBGET integrated database retrieval system