Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445936
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Entry
135445936 CDS
T09958
Symbol
TAF1A
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135445936 (TAF1A)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
135445936 (TAF1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
Mob1_phocein
Motif
Other DBs
NCBI-GeneID:
135445936
NCBI-ProteinID:
XP_064565236
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All DBs
Position
3:complement(88413720..88425803)
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AA seq
469 aa
AA seq
DB search
MDSFLEDYEEAPAVVVGGKRRRRRRRRSPATQAALQPLLHLPFLPPQPVSSNEHKSNFKK
SKEACLSYIQDALLQKQWKRAAEFLTCYVESLEKDYSREHIGPSEMIWRIGTEILWHHSQ
SRMKEFSCFMEQMKTLGVKRYLKVCLEHVFHLLCNGQIDEAYQNLSLAESWRFGEQTAIQ
DKEIKLIQAYRGLLDYCSWSKQKKILLEHGEDGFADLAVEQEMHSYFRKAAVNLKEIIKI
PGVWDVFVKCYVDLLEFYGEHNEARQVLNEYAYNSKFPANPNAHVYLYQFLKRQGESKKS
LLSALKILHDIVPSHELMIDFNTMLQKSKKRKKRQLGLEVIFAALDYAGWKENAKAWSCL
ARQVKQIVISEKHLDWIKQEWNSRKDWWPDFHFSRYLAKRNWQENKSLSHEKALVAGILL
GKDCKYFKYVSHQGCKARLKRFRMLKKFVTRHNPVYLRISGPPDCSVQR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcctggaggattatgaggaggcgccggcggtggtagtgggggggaagaga
agaaggaggaggaggaggaggagccccgccactcaggcggccttgcagccgctcctgcac
ctgcccttcctgccgccgcagccggtatcttccaatgaacacaagtcaaacttcaagaag
agcaaggaagcatgtttaagttacattcaggatgccttgctccaaaagcagtggaaaagg
gctgcagagttcctgacctgctatgttgagtcactagagaaggactattccagagaacac
ataggtccatcagagatgatttggagaataggaactgaaattttgtggcatcattcccaa
agcaggatgaaagagttcagctgtttcatggaacagatgaaaactttaggagtaaaaagg
tacttgaaggtctgcttggagcatgtcttccatctcctctgtaatgggcaaatagatgaa
gcctaccagaacctgtccctggcagaaagctggaggtttggagagcaaacagccattcag
gataaggaaattaagctgattcaggcttacaggggactcttggactactgtagctggtct
aagcagaagaaaatcctgttagaacatggtgaggatggatttgcagacttggctgttgag
caggaaatgcacagttacttccggaaggcagcagtgaacttgaaggagattattaaaata
cctggagtctgggatgtctttgtgaaatgctatgtggatttgctggagttctatggagag
cacaatgaggcccgccaagtgttaaatgaatatgcctacaactcaaagttccctgctaac
cccaatgcccatgtctacctctatcagttcctcaagaggcagggtgaatcaaagaaatcc
ctcctatctgcactgaagatcttgcatgatattgttccttctcatgaactaatgatagat
tttaataccatgcttcaaaaatcaaagaaaagaaaaaagcgtcaactgggcctagaagtt
atttttgcagccttggattatgctggctggaaagaaaatgcaaaagcatggagctgtttg
gcaagacaggtgaaacaaattgtaatctctgagaagcatcttgactggatcaagcaagag
tggaactccaggaaggactggtggccagacttccattttagccgttacttggcaaaacgg
aattggcaggaaaataaaagcctttcacatgaaaaagctctggtggctggaattctactg
ggaaaggattgcaaatacttcaaatatgtatcacaccaaggctgcaaagctcggctgaaa
aggtttcggatgctgaagaagtttgtgactaggcacaatcctgtctacctgagaatatct
ggtcctccagattgctctgttcagcgttga
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