Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445958
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Entry
135445958 CDS
T09958
Symbol
RAB1A
Name
(RefSeq) ras-related protein Rab-1A
KO
K07874
Ras-related protein Rab-1A
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135445958 (RAB1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135445958 (RAB1A)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135445958 (RAB1A)
04031 GTP-binding proteins [BR:
zle04031
]
135445958 (RAB1A)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
135445958 (RAB1A)
Autophagy
Other autophagy associated proteins
135445958 (RAB1A)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
135445958 (RAB1A)
Exosomal proteins of other body fluids (saliva and urine)
135445958 (RAB1A)
Exosomal proteins of colorectal cancer cells
135445958 (RAB1A)
GTP-binding proteins [BR:
zle04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
135445958 (RAB1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RsgA_GTPase
MMR_HSR1
Gtr1_RagA
SRPRB
FeoB_N
ABC_tran
AAA_16
AAA_7
AAA_29
LANC_like
AAA_22
AAA_5
Motif
Other DBs
NCBI-GeneID:
135445958
NCBI-ProteinID:
XP_064565294
LinkDB
All DBs
Position
3:90931094..90944620
Genome browser
AA seq
326 aa
AA seq
DB search
MRCRRCGGCRKSESTGGGAAGRRRRRGLGFPSRPSAVPRPCKRCSASGRPVSWSGSGGHF
GLRRSAEAAERARADGPSRAPGDRGSLGPAHRGAPASAAGGAAAPPPHSALAVPRAAGPT
DMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT
IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK
LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG
ATAGGAEKSNVKIQSTPVKQSSGGCC
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgccgccgctgcggtggctgccggaagagcgagtccacaggagggggcgcggcc
gggaggaggcggcggcgcggactcggtttcccgtcgcgcccctcggccgtcccccggcca
tgtaagcgctgctcggcaagcggccgccccgtttcctggtcgggctccggcggccatttt
gggctgaggcgcagcgcggaggccgcggagcgggcgcgggcggacgggccgagccgagcg
ccgggcgatcgcggctccctcggaccagcgcaccgcggagcgcctgcctcggcggcggga
ggtgccgccgcaccgccccctcacagcgcgctcgccgtccctcgggccgcgggccccacg
gacatgtccagcatgaaccccgaatatgactatttattcaagctacttctgattggagac
tccggtgttgggaaatcttgccttctacttaggtttgcagatgacacgtacacagaaagt
tacatcagcacgattggtgtggacttcaaaatcagaactatagaactagatgggaaaaca
atcaagcttcagatatgggacacggcgggacaggagcggttccggactatcacttccagt
tactatagaggagctcatggcatcatagttgtgtatgatgttacagatcaggagtctttc
aataatgtcaagcagtggctgcaggagatagaccgttatgccagtgaaaacgtcaacaag
ttgttggtggggaacaagtgtgatctgaccacaaagaaagtagtagactatacaacagca
aaggaatttgcagattctcttggaattccgtttttggaaaccagtgcaaagaatgccaca
aatgtagaacagtctttcatgaccatggctgccgagattaaaaaacgaatgggcccggga
gcgacagctggtggtgcagagaagtccaatgttaaaattcagagcactccagtcaagcag
tctagtggaggttgctgctaa
DBGET
integrated database retrieval system
