Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445965
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Entry
135445965 CDS
T09958
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135445965 (SOX1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135445965 (SOX1)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135445965
NCBI-ProteinID:
XP_064565316
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All DBs
Position
1:26147577..26150397
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AA seq
372 aa
AA seq
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MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGNKANQDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTASGGYAH
MNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGSGGHPHHPHPHHPHHPHNPQPMHRY
DMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALGS
LVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQSAS
TGVNGTVPLTHI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccctggcggagcccaggcccccacg
aacctctcggggcagaccggagcgggaggcggcggaggcggcggcggcggcgggggaaac
aaagcgaaccaggaccgggtcaagagacccatgaacgccttcatggtgtggtcgcggggc
cagcggcggaagatggcccaggagaaccccaaaatgcacaactcggagatcagcaagcgc
ctgggggccgagtggaaagtcatgtcggaggccgagaagagaccgttcatcgacgaggcg
aagcggctgcgggcgctgcacatgaaggagcacccggattataaataccggccccggcgg
aagaccaagaccctgctcaagaaggacaagtactcgctggccggggggctgctgagcgcc
ggctcggccgggggaggcccggccggcgtcggcgtgggcatgggcgtcggcgtcagcccg
ggcggcgtcgggcagcggctggagagccccggcggcacggccagcggcggctacgcgcac
atgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcggcggcggcg
gcgatgatgcaggaggcgcagctcgcctacagccagcacccgggcagcggggggcacccg
caccacccgcacccccatcacccgcaccacccgcacaacccgcagcccatgcaccgctac
gacatgggcgccctgcagtacagccccatctccaactcgcagggctacatgagcgcctcg
ccatcgggctacggcgccctgccctacggctcccagccccaccagaactcggcggcggcg
gcggcggcagcggcggcggcggcggccgcctcctcgggtgcgctgggcgccctgggctcg
ctggtgaagtcggagcccagcgtgagcccgcccgtcacctctcactcgcgggccccatgc
cccggggacctgcgggagatgatcagcatgtacttaccggccggggaaggcggggatccg
gcggccgctgccgcccagagccggctccactccctgccccagcactaccagagcgccagc
acgggggtgaacggcaccgttcccttgacgcatatctga
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