Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446018
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Entry
135446018 CDS
T09958
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135446018 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135446018 (NRXN1)
Membrane trafficking [BR:
zle04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
135446018 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
135446018
NCBI-ProteinID:
XP_064565439
LinkDB
All DBs
Position
3:complement(94765469..95447452)
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AA seq
1503 aa
AA seq
DB search
MGAVLVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLSDTAVNDNRWHAVVIRR
HFKNTTLIIDRAEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQASPLESQEVRLDDEQSRLCARDDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEEDNYVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLS
FKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVK
VTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTAD
LPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITF
ETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIE
MLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGES
EILDLDDDLYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQS
TAGVKPSCSRETAKPCLSNPCKNNGVCRDGWNRYVCDCSGTGYLGRSCEREATILSYDGS
MFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLDC
IRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKGLKLMVDDQQAVTGQMAGDHTRLEF
HNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIA
DPVTFKTKASYVALATLQAYTSMHLFFQFKTTSLDGLILFNSGDGNDFIVVELVKGYLHY
VFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTNNLHTVKIDTKITTQSTAGARNLDLKS
DLYIGGVAKEMFKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPS
TTCQEDSCANQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYTWPPNDR
PSTRADRLAIGFSTVQKEAVLVRVDSSTGLGDYLELHIHQGKIGVKFNVGTDDIAIEEMN
AIINDGKYHVVRFTRSGGNATLQVDNWPVIERYPAGNNDNERLAIARQRIPYRLGRVVDE
WLLDKGRQLTIFNSQATIKIGGKERGHPFQGQLSGLYYNGLKVLNMAAENDANIMIEGNV
RLVGEVPSSMTTESTATAMQSEMSTSVMETTTTLATSTARRGKAPTKEPIGQTSDDILVA
SAECPSDDEDIDPCEPSSGGLANPTRAGGGREYPGSSEVIRESSSTTGMVVGIVAAAALC
ILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVIKEKQPNSAKSSNKNKKNKDKE
YYV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtgctggtgcggcgcgggggctgcctgctgctctggctggccctactgctg
ggctgctgggccgagctgggcagcgggctggagttcccaggtgcggagggccagtggacc
cgcttccccaagtggaacgcctgctgcgagagtgaaatgagcttcaacatgaagacgcgc
agctccagcgggctggtgctctacttcgacgacgagggtttctgtgacttcctggagctc
atcctcacccagggagggcggctacagctcagcttctccatcttctgcgccgagcctgcc
accctgctctcggacacggcggtcaacgacaaccgctggcacgccgtcgtcatccgccgc
cacttcaagaacacgacgctgatcattgaccgagcggaggccaagtgggtggaggtgaag
tccaaacggcgggacatgactgtcttcagcgggctcttcctaggagggctcccgccggag
ctgcggtcggcgacgctaaagctgacgctctcctccgtcaaggaccgggagcccttcaag
ggctggataacagacgtgcgggtgaactacacgcaggcgtcgccgctggagagccaggag
gtgcggctggatgacgagcagagccggctgtgcgccagggacgacgtctgcctcaacggg
ggcgtctgctcggtgctcaacgaccaggccgtctgtgactgctcccaaacgggcttccga
gggaaggactgcagtgaagaagacaactatgtggaaggtctggcgcacctgatgatgggc
gaccaaggtaaaagtaaagggaaagaagaatatattgcgacattcaagggatcagagtac
ttctgctatgatttatctcagaaccccatacagagcagcagtgatgaaataactctgtcc
tttaaaacgctgcagaggaacggactaatgcttcacacaggaaaatcggccgattatgtc
aatcttgcactgaaaaatggagctgtctccttggtcattaatttgggctcaggggccttt
gaagcgctggtggaacctgtgaatgggaaatttaatgacaatgcctggcatgatgtgaaa
gtaaccaggaatctgcgtcagcactcaggcattggacacgctatggtaaacaaactacat
tgttcggtgacaatatcagtggatggaattctgaccacaacgggatacacgcaagaagac
tacaccatgctgggctctgatgactttttctatgttggaggcagtcctagcacagcagac
ctcccagggtcaccagtcagtaacaactttatgggctgtctcaaagaggttgtatataaa
aataatgatgtcaggttggagctgtctcgacttgccaagcaaggggatcctaaaatgaag
attcatggggttgtagcatttaaatgtgagaatgttgcaaccttagatccaatcacattt
gaaacaccagagtctttcatctctctgccaaagtggaatgccaagaaaacaggctcaata
tcatttgactttcgtacaactgagccaaatggcctcattcttttcagtcatgggaaacca
aggcaccaaaaagatgccaaacatccacagatggtgaaggtcgatttttttgccattgag
atgcttgatggccacctctacctgctgttagacatgggatcaggtactataaaaataaaa
gccttgcagaagaaggtgaatgatggtgaatggtaccacgtggattttcagcgggatggg
cggtcagggacgatatctgtgaacacgttacgtactccatacaccgcaccaggggaaagt
gaaatccttgacttggatgatgacttgtatcttggaggcttaccagaaaataaagcaggc
ctggtcttcccaacagaagtgtggacagcactcctcaattatggatacgttggctgcatt
cgagatttatttattgatggtcaaagcaaagatattagacagatggctgaaattcaaagc
acagctggagtaaaaccctcatgctccagagaaactgcaaagccttgccttagcaacccc
tgtaaaaacaatggtgtgtgcagggatgggtggaacagatatgtgtgtgattgctctggc
acggggtaccttggcagatcgtgtgaaagagaggccacaattttaagctatgatgggagt
atgtttatgaaaatccagcttcctgtggtgatgcacacagaggccgaagatgtttcttta
aggttcaggtcccagagagcttatggcattttaatggccacgacttccagggaatctgca
gatacccttcgcttagagctggatgcaggacgagttaagctaacggtcaacctagactgt
atcaggattaactgtaattccagcaaaggcccagaaaccctttttgctggctataacctc
aatgataatgagtggcacacagtgcgcgtggtgcggcgaggaaaaggtttaaagttaatg
gtggatgaccagcaggctgtgacaggtcaaatggctggcgatcacacacggctggagttc
cacaacatagaaacaggaataataacagaacggcgctacctgtcttctgtgccttctaat
tttattgggcatctgcagagtctcacatttaatggcatggcatacattgacttatgtaaa
aatggagacatcgattattgtgagctaaatgcaagattcgggttcaggaacatcatagca
gaccctgtaacctttaaaacaaaagcaagttatgttgcactggccacgctacaagcgtac
acatctatgcacctttttttccagttcaaaaccacctccctggatggattgatacttttt
aacagtggcgatggaaatgatttcattgtggttgaattagtgaaagggtatttacactat
gtgtttgacttgggaaacggtgccaacctcatcaagggaagttctaataaacctctgaat
gacaaccagtggcataatgtcatgatatcaagggataccaacaacctacacactgtaaag
attgacactaaaatcacaacacagagcacagcaggagccagaaatctagatctaaaaagt
gatttgtatattggaggagtggccaaagaaatgtttaaatccctgcccaagctggtgcat
gcaaaggaggggttccaaggctgccttgcatcagttgacttgaacggacggctccctgat
ctgatctcagatgctctcttctgcaatgggcaaatagagagaggatgtgaaggccccagc
accacgtgccaagaggattcctgtgcaaaccagggcgtgtgccttcagcagtgggatggg
ttcagctgtgactgcagcatgacctccttcagtgggccattgtgcaatgacccggggaca
acatatatctttagcaaaggtggtggacagatcacttacacgtggcctcccaacgaccgg
ccgagcactcgagcagacagactggcaatagggtttagcactgtgcaaaaagaggctgtg
ctggtgcgagtggacagctctactggccttggagattatttagagctgcatattcaccag
ggcaaaatcggagttaagtttaatgtcgggacggacgacatcgccatcgaggagatgaac
gccatcatcaacgacgggaagtaccacgtggtgcgcttcacccggagcggtggcaatgcc
accctgcaggtggacaactggcccgtcatcgagcgctacccagcaggaaacaatgataac
gagcgcctggcgattgctagacagcgaattccatatcgacttggtcgagtagttgatgaa
tggctactcgacaaagggcgtcagctcacaatcttcaatagccaagcaaccataaaaatt
ggaggcaaggaacgcggccaccctttccaaggccagctctctggtctttactacaatggc
ttgaaagttctgaatatggcagcagaaaatgatgccaacatcatgatagaagggaatgtg
agacttgttggtgaagtgccttcctctatgacaaccgagtccacagccaccgccatgcag
tcggagatgtccacgtcagtcatggaaaccaccaccaccttggccaccagcaccgccaga
agaggaaaggctccgaccaaagaacccattggtcagacttcagatgacatcctggtggcc
tcggctgaatgtcccagcgatgatgaggacatcgatccctgtgagccgagctcaggtggg
ttagcaaaccccaccagggcgggaggaggacgggagtaccccggctcgtccgaggtgatc
cgcgaatccagcagcacgacgggcatggtggtcgggatcgtggcggcagcagcgctgtgc
atcctcatcctcctgtatgccatgtacaagtacaggaatcgagacgagggctcctaccac
gtggacgagagtcgaaactacatcagtaactcagcacaatccaacggggctgtgatcaag
gagaagcagcccaacagcgctaaaagttccaacaaaaacaagaaaaataaggataaggag
tactatgtctga
DBGET
integrated database retrieval system
