Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446092
Help
Entry
135446092 CDS
T09958
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135446092
Transcription factors [BR:
zle03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135446092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS_4
PAS
HLH
PAS_9
RHA1_ro05818_N
PAS_2
DUF7750
Motif
Other DBs
NCBI-GeneID:
135446092
NCBI-ProteinID:
XP_064565660
LinkDB
All DBs
Position
3:complement(100436763..100441915)
Genome browser
AA seq
433 aa
AA seq
DB search
MTIFCSHCHRPLQAEMSCLPARAKQAPSAPRPFRSTKSASKARRDQINAELQALRSLLPI
SAQEKERLSYLHTMALVCLRLRGAQLFPPGLAPPTGPALGTELLSLLPGFLLVLSADSKL
VYISENVAQVLGLSVVELLAQGDTLFDILDGRVGEDVHKKLLLAREEPGREVTFVSEMRT
SKAFRLQHGGNRVMAVCGRFVALHWPPSPSSTAFLALCTPLVQSPTDGEAASQDDIFQSM
HLLDMTFIDVTESVTYHLGYHREELVGQSWYSLLHPEDAELAAAQHRALALGAGAGPAAG
TAVLRVLRRDRAWSWLRVWARRDGGCITCTCRCLREEEAAHLRSRQPRAAAPPAGADVAR
LAEQLRALADSLSPPAPPCRWSRPEEAEDDASVCFGNSLLHHPPAQFLRFPFEQKIGCDI
PSVLPQVWSAQRC
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcttctgcagccactgccaccggccactgcaggcagagatgagctgcctgccc
gccagggccaagcaggcgcccagcgccccgaggcccttcaggtcaaccaagagtgcttcc
aaggctcgccgagaccagatcaatgcggagctgcaggcgctgcgctccctgctgcccatc
tctgcccaagagaaggagcggctctcctacctgcacaccatggccctggtgtgcctccgc
ctgcggggggctcagctcttccctccaggcttggctcctcctacgggaccggcccttggc
acagaactactctccctgctcccggggtttcttcttgtgctctcagcagacagcaagctg
gtctacatctcagagaacgtggctcaggtcctgggcctctctgtggtggagctgctcgct
cagggggacacgctctttgacatcctggatgggcgagtgggagaggatgtgcacaagaag
ctcctccttgcccgggaggagcctggcagggaagtcacttttgtcagcgagatgcgcacg
tccaaggccttccggctgcagcacgggggcaatcgggtgatggcagtgtgtgggcgcttt
gtggccctgcactggccaccctccccctccagcacagccttcctggctctctgcacaccc
cttgtgcagtcacccacagatggcgaagctgcttcccaggatgacatattccagagcatg
catctcctggacatgacgtttattgatgtcacggagagtgtcacctaccacctcggctac
caccgggaggagctggtcggtcagtcgtggtacagcctcctgcaccctgaggatgctgag
ctggcagctgcccagcacagggccctggcgctgggcgccggggccgggccggcagcgggg
accgctgtgctgcgagtgctgcgcagggaccgcgcctggagctggctgcgagtgtgggcg
cggcgggacggcggctgcatcacctgcacctgccgctgcctcagggaggaggaggcggcc
cacctgcgctcccggcagccccgcgccgccgcgccgcccgcgggcgcggatgtggcccgg
ctggccgagcagctccgcgccctggccgacagcctctcgccgcccgctccgccctgccgc
tggtctcgtcccgaggaagccgaagacgatgcctctgtctgctttgggaactctctgctg
caccaccctcctgcccagttccttcggtttcccttcgagcagaaaatagggtgcgacatt
ccaagtgtgctcccacaggtgtggagtgctcagaggtgctga
DBGET
integrated database retrieval system
