Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446100
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Entry
135446100 CDS
T09958
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
135446100 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135446100 (PEX6)
Membrane trafficking [BR:
zle04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
135446100 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_5
Mg_chelatase
AAA_22
PEX6_4th
nSTAND3
NPHP3_N
Vps4_C
TsaE
RuvB_N
AAA_25
DUF815
RNA_helicase
AAA_33
Parvo_NS1
TIP49
bpMoxR
AAA_28
IstB_IS21
AAA_14
AAA_24
Motif
Other DBs
NCBI-GeneID:
135446100
NCBI-ProteinID:
XP_064565674
LinkDB
All DBs
Position
3:100595525..100609264
Genome browser
AA seq
972 aa
AA seq
DB search
MAVAVLRPLDAPPAELWPATALLLAPAGLCAALRGRGGALVLAVRPTGRGGAQPVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVAVWPVRRPPALAWVLLGAAGRAGRLAGGAV
LARRGEALPGPGPGPGPLVLEARPALQGLLGSGTRTALAPPPPAPPGTARGRPPSAAAPP
LVSRFAAAASGPRLRAVPGGAGGGGGAEVWVSRRGLLALGLFQGEWVRVGVDGAAREHLA
ALLARPPPWEYPRAARRSPPDGTALLAPALAFNLGCDPAAAAQLRLQRYERSGAADGKGS
RSVLSVPPFAKELHLEIVCSPAYNTRGSYGCVLYRHFETPRLVQEGDILCVPTFGNAEFI
ELNADKFLRWPELYFKVKKIVGMVEGEQSEGYLVDTQNTSLYLVGSTNSTVPSAPARNSS
EFWSSLSPAGLSDVVKQLCDALRPHLRRRASALSGVGSVLLSGPAGSGKLMAVRAVCSCL
NLHLLKVDCVSLCSDTSAATEEKVQVAFSQAQQYQPCVLLLKDIEVLGRERDGLGEDARV
IATLRQLLLDTEPALSHPVLVIGTTCKPQDVPTDVQTAFLHEVKIEAPSEEQRRLMLSML
TASLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLSEEVERDFC
TAGFPVLEEDFSAALEQLHDAHSQAVGAPKIPSVSWQDVGGLQEVKKEILDTIQLPLEHP
ELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNV
FARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSSREVFVIGAT
NRPDLLDPALLRPGRFDKLVYVGINEDRESQLQVLSAVTRRFKLDPSVNLTTILEKCPAQ
LTGADIYALCSDAMMCAVKRKVEWIEEGLDTEKSALILTMEDFLQAAARLQPSVSEQELL
RYRLIQQKFAAS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgctgcggccgctggacgcgccgccggcggagctgtggccggccacg
gcgctgctgctggcgccggcggggctgtgcgcggcgctgcgcgggcggggcggcgcgctg
gtgctggcggtgcggccgacggggcgcggcggggcgcagccggtgctgctgagcgccgtg
gcgctggaggcgggcgggcggcgcggcgcggagctgtggctgcgcggggcgctgctgcgg
cgcctggggctggcggccggccgcagggtggccgtgtggcccgtgcggcgcccgccggcg
ctggcctgggtgctgctgggggcggcgggccgggccgggaggctggcgggcggcgcggtg
ctggcgcggcggggcgaggcgctgccggggccgggccccgggccgggtccgctggtgctg
gaggcgcgcccggcgctgcaggggttgctgggcagcgggacgcgcaccgccctcgccccc
ccgccgcccgccccgccgggcaccgcccgcggccgccccccctccgccgccgcgccgccc
ctcgtctcccgcttcgccgccgccgcctccgggccgcggctgcgggcggtgcccggcggg
gcgggcggcggcggcggggcggaggtgtgggtgagccggcgcgggctgctggcgctgggg
ctgttccagggcgagtgggtgcgggtgggcgtcgatggcgcggcccgggagcacctggcg
gcgctgctggcgcggccgccgccatgggagtacccgcgggccgcccgccgctcgccgccc
gacggcaccgcgctgctggccccggccctggccttcaacctgggctgcgaccccgccgcc
gccgcacagctccggctacagaggtacgaaaggagcggagccgcggatgggaagggcagc
cggtccgtgctgtctgtgccgccgttcgccaaggagctgcacctggagatcgtgtgctcg
ccggcgtacaacacccgggggagctacggctgcgtgctctacaggcacttcgaaacgccg
cggctggtccaagagggagacatcctgtgtgttccaacatttggaaatgctgagtttata
gaactaaatgcagacaagttcctaaggtggccagagctttatttcaaggtgaagaagatt
gtcggcatggtggaaggcgagcagtccgagggttacctggtggacacccagaacacgtct
ctctatctggtgggctcaacaaacagcactgtcccatctgccccagcccgtaacagcagt
gagttctggagcagtttgtctcctgcagggctttctgacgtggtgaagcagctctgcgat
gctctccggccccacctgcgccgtcgggccagcgcgctgagcggcgtgggcagtgtgctg
ctctcggggcccgccggcagcgggaagctgatggctgtcagagctgtgtgcagctgcctc
aacctccacctcctcaaggtcgattgtgtcagtttgtgcagtgacaccagtgcagccaca
gaggagaaagtgcaggtggccttcagccaggcccagcagtaccagccctgtgtgctcctg
ctcaaagacatcgaggtgcttggcagagagcgagacgggctcggggaggacgccagggtc
attgctaccctcaggcagctgctcctggacacagagccagcactgagccaccccgtgctg
gtgattggcacaacctgcaagccccaggatgttcccacagatgtgcagactgctttcctc
catgaggtgaagattgaggccccttcagaggagcagaggaggttgatgctgagcatgctg
actgccagcctgcctctgggcaaagaagtgagcctgtccaagctggcccgcaggactgca
ggatttgtgctgggagatttctgtgccttgttgtcccacagcagccgggctgcttgcacc
cgcatccaggccttgagttttccaggcgggctgagcgaggaagtggagagggatttttgc
actgcagggttcccggtgctcgaggaggattttagtgctgcactggagcagctgcatgat
gcccactcacaggccgtgggagccccaaagatcccctcagtgtcctggcaggatgttggt
gggctgcaggaggtgaagaaggagatcctggacactatccagctgccgttggagcaccca
gagctgctgtccctgggactgtgccgctctgggctgctgctgtatgggcctccagggaca
gggaagaccttgctggcaaaagctgtggcaacaacatgcaccatgacgttcctgagtgtg
aaaggaccagagctcatcaacatgtacgtcgggcaaagcgaggagaacgtgcgcaatgtg
tttgccagagccagggcagctgctccctgcattatcttctttgatgagctggattccctg
gcccccagtcgtgggcgaagtggagattcagggggtgtcatggacagagttgtctcacag
ctccttgcagagcttgatggccttcattccagcagagaggtgtttgtcattggagccacc
aacaggcctgacctcctggacccagctctgctacgaccgggcaggtttgacaagctggtc
tacgtgggcatcaacgaggaccgggaatcacagctgcaggtgctgagtgctgtcaccagg
aggtttaaactggatccttctgtgaatctcaccaccatcctagaaaaatgcccagcccag
ctgacaggagcagacatctatgccctgtgttcagatgccatgatgtgtgctgtcaaacgc
aaggtggagtggattgaggaagggctggataccgagaagtctgctctgatcctgaccatg
gaagactttctgcaggctgctgccaggttgcagccatcagtctctgagcaggagctgctc
aggtacagactcatccagcagaagtttgcagcctcctaa
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