Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446134
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Entry
135446134 CDS
T09958
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1 isoform X1
KO
K19657
nephrocystin-1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135446134 (NPHP1)
Cilium and associated proteins [BR:
zle03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
135446134 (NPHP1)
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Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
SH3_10
DUF6549
Motif
Other DBs
NCBI-GeneID:
135446134
NCBI-ProteinID:
XP_064565733
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Position
3:101723686..101735780
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AA seq
747 aa
AA seq
DB search
MSPAGAAGGARDLPELGAAGAGPWSAPAPPRARHPAAPGLPRCPATMSERRARGPLQRVQ
RRSRELRAQVEALRAESAAAAPGQREPLRLRCTELKELVEENTKALHALKKADEPAPVGN
YSQRKEEEEKLLLRLSQQLQKLLLVLDQDNVTRNYPGGKEHQKGSHAEEGNEEEEESEDE
ESEEEDTEEEDDEEKLLDDPNVRECVAVGNFDAQQEGDLTFVKGETLLIHDKKEDGWWVA
ENSKGERGLVPRTYLAVPKEEEESQEESEEHIEVVDETADGAEIKKRTDSHWSAVRAIVE
NDTVEVLTTTGAVPAGFRPSMLFQLLEEGEEFRASYYLQPKLTPSQLAFKDLVWNSERNT
IHPRATRVSLIVTLCSCKMIPPPGSGVRVLSRHVRLCLFDGSRVLSNIHTVRATWLPKNP
QTWTFSPRVMGILPSLLDGDCFVRSNSLSADIGILFELGITYKCNHGQWSPAPVYTDRAC
PSGICCWKAQQSTGERGELSCGWAFLKLFTSSGIPIPSKMHELVLSGGTPYERGVEVDPS
ISRRAGSGVFQQFMSLRKQPVLLVKVKSPSVHSKDILNFLPETLVGGMCYIHLLVFYRQI
LGDALLKDRTSMQSTDLICNPVLATFPQLLDQPDLMDALRSAWAEKERTLKRIEKRDQEF
LKAAFVLVYHDSVFPLLCSTSLPSYRWAEEEVELSRWKVIHDFLKRSQERDGALEYLLSS
ENTHRAFDISELAYDFLGEVRENNPGE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagccccgccggggctgctgggggtgcgagggaccttcccgagctcggggctgcgggg
gccgggccgtggagcgctccggccccgccccgggcccgtcatccggcggcgccagggctg
ccccgttgcccggcgacgatgtcggagcggcgggcgcgggggccgctgcagcgggtgcag
cgccggagccgagagctgcgggcacaggtggaggcgctgcgggcggagagcgcggccgca
gcccccgggcagcgggagccccttcggctgagatgtacagagctgaaggaattggtggag
gagaatacaaaggctctccatgctttgaaaaaagctgacgagcctgcgccggtggggaat
tacagccagaggaaggaagaggaagaaaagctgttgctgagactctcccagcagctgcag
aaactccttcttgtcttggatcaggataacgtgacaagaaattatccagggggtaaggaa
caccagaaaggctctcatgcagaagagggaaatgaagaagaggaggagagtgaagatgaa
gaaagtgaggaggaagacactgaagaagaagatgatgaggagaagttgttggatgatcca
aatgttagagaatgtgttgctgttgggaactttgatgcccagcaggaaggggatctcaca
tttgtgaaaggtgaaaccctgctcatacatgacaagaaggaggatggctggtgggtagct
gaaaattccaagggggagagaggcctcgttcccaggacctaccttgcggttcctaaggaa
gaggaagaaagccaggaggagtcagaagaacacatagaagtggtggatgaaacagcagat
ggagctgaaattaaaaaaagaacagattcccactggagtgctgtccgagccattgtagag
aatgacacagtggaggtgctgaccaccacaggggcagttcctgcagggtttcgcccatcc
atgctgttccagctcctggaggaaggtgaagaatttcgagcaagttactacttgcaaccc
aagcttactccatcccagctggctttcaaagacctggtgtggaactctgagagaaatact
atccatcctagagccaccagagtgtccctgattgtcactttgtgcagctgcaagatgatc
cctccccctgggagcggcgtgcgcgtcctcagccggcacgtccggctctgcctcttcgat
ggcagccgggtgctgagtaacattcacacagtgagagccacgtggctgcctaaaaatcct
caaacttggaccttttctccaagggtgatgggcatcttacccagcttgcttgatggtgac
tgttttgtcaggtccaactccctgtctgcagacattgggatcttgtttgagcttggcatc
acgtacaagtgcaatcatggacagtggtctccagctccagtttacacagatagagcctgt
ccatctgggatatgctgctggaaagcacaacagtcaacaggtgaaagaggagagctgagc
tgtggctgggcctttctgaagcttttcacttccagtgggattcctattccttccaagatg
catgagctggtcctgagtggtggaactccctatgagagaggtgttgaggttgacccatca
atatcgaggagagcaggctccggggtttttcagcagttcatgagcctcaggaagcagcct
gtgcttctggtgaaggtgaagtcaccgagtgtgcactcgaaagacatcctgaattttctc
cctgaaacattagttgggggcatgtgctacatccacctcctggtgttttatcggcaaatc
cttggagatgccctcctgaaggacaggacgagcatgcagagcacagacttaatctgtaat
cctgtgctagcaactttccctcaactcctggatcagccagacctgatggatgcacttcgg
agtgcctgggctgagaaagaaagaacattgaagagaattgagaagagagatcaagaattc
ctgaaggctgcgtttgtcctggtgtaccacgactctgtgttccctctgctctgctccacg
tccctccccagctacagatgggctgaggaggaggtggaattgtctcgctggaaggtcatc
catgacttcctgaagaggagccaggagagagatggtgccctggagtacctgctgtcatca
gaaaatacccacagagcctttgacatctcagagctggcctatgatttcttaggagaagtg
agggaaaacaatcctggagaatga
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