Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446143
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Entry
135446143 CDS
T09958
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04517
IgSF CAM signaling
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135446143 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135446143 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135446143 (SPTBN1)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135446143 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
135446143 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
135446143
NCBI-ProteinID:
XP_064565748
LinkDB
All DBs
Position
3:101918324..102034282
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPIPSPTSDRKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacggtagcgacagattacgacaacattgagatccaacagcagtacagcgac
gtcaacaaccgctgggatgtggacgactgggacaatgagaacagctctgctcggctgttt
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
accaagtgggtgaattcccacttggcgcgtgtgtcctgccggattacagacctgtacacc
gacctgcgagatgggaggatgctcatcaagctcctggaggtgctttcaggagagagactt
cctaaaccaaccaaaggaaggatgcgcatccattgcctggagaacgtggacaaagccctg
cagttcctgaaggagcagcgagtgcacctggagaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggcctcatttggaccattatcctgagattccagatccaa
gatatcagcgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctctgctt
ttgtggtgccagatgaaaacagctgggtaccccaatgtcaacatccacaactttacaaca
agctggagggatgggatggcgttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccctgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaattcgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaaggc
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccaagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
accaagaagcacgaggccatcgagacggacatcgcggcctacgaggagcgcgtgcaggcc
gtggtggccgtggcgaaggagctcgagaccgaaaactaccacgacatcaaacgcatcact
gcaaggaaggacaatgtcatccgcctgtgggagtatctcctggagctgctccgggcacgc
agacagcgcctcgagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggacgagatgaaggtgcttttactgtcccaagactacggcaaacatttg
ttgggagttgaggacctgctgcagaaacacgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccactgatggagaaggt
tacaagccctgtgacccacaggtgatccgggaccgcgtggctcacatggagttctgctac
caggagctctgccagctcgcggccgagcgccgcgcgcgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaagaggagggctggatcagggagaaggagcagatc
ctgtcatctgatgactacgggaaggacctcaccagtgtcgtccgactcttgagtaagcac
aaggcgtttgaggatgagatgagcggccgcagcggccactttcagcaggcgataaaagaa
ggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagaggctg
gaggaagcctctctccttcaccagttccaggctgatgctgacgatatcgatgcgtggatg
ttggacatcctcaagattgtctccagcaacgatgttggccatgatgaatattccactcag
tccttggtcaagaagcacaaagatgtggctgaggagattgccagctaccggcccaccatc
gactcccttcacgagcaggccaaggccctgccgcaggagcacgcggagtctccggatgtg
caaggcaggttgtccggaatcgaggagaggtacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggataccctggctctctataagatgttcagcgaggcagatgct
tgtgagctttggatcgacgaaaaggagaagtggctgaataacatgcagatcccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcatcccgtgtggccgtggtgaaccagattgccaggcagctgatgcacagtggccac
cctggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgattgagtccaca
caagacctgggtaacgacctggccggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcagaaggaggcagagaag
ctggaatcagagcatcctgaccaggcacaagccatcctctcccggcttgcagagatcaac
gacgtgtgggaagaaatgaagaccaccctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgctattgcctccgaagacatgcccaacaccctgacagaggctgagaagctgctc
actcagcacgagaatatcaagaacgaaatcaacaactacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaaggacaaactgacgctcagtacatgttcctgcgc
cagcgcctgcaggctttggacaccggatggaatgagcttcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgttcctcagagataccaagcaagca
gaagctttccttaataaccaggagtatgttctggcgcacacggagatgccaaccaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaat
gaagaaaagatcaatgcagttgtggagacgggcaggaggcttgttagtgatgggaacatt
aactctgataaaatccaggagaaagtggactcaattgatgacagacataggaagaaccgt
gaagcagccagtgaacttttgatgagactcaaagataacagggatctccaaaagtttctt
caggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcgaggaacctgcacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggaggggatgcagctcatt
gcagagaaaccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaaatg
tgggacgagcttgaatccaccacccagaccaaggctcagcgtctcttcgatgccaacaag
gcagagcttttcacccagagctgtgcagacctggataagtggctgaatggtttggagagc
caaatccagtcggatgactacggaaaagacctcactagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcaaagc
caggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctggagcctttgaatgagaggaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtc
ggagagaggatgcccatagctacatccactgatcatggacacaacctccagactgtgcag
ctactaataaagaaaaatcagacccttcagaaagaaatccagggtcaccagcctcgtatc
gatgacatttttgagaggagtcagaacatcatcacagagagcagccccaatgctgaagtc
atccagcagaggcttgcagacttgaagcagctgtggaacctcctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgcagcc
gaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagcagtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctacgcgggc
ctgaaggacctggccgaggagaggaggggcaagctggacgagaggcaccggctgttccag
ctcaaccgcgaggtggatgacctggagcagtggattgccgagagggaggtggtggcaggg
tcccacgagctgggccaggactacgagcacgtcacgatgctgcaggagcggttccgggag
ttcgcccgggacaccgggaacatcgggcaggagcgggtggacaccgtcaaccacatggcc
gacgagctcatcaactccggccactcggacgccgccaccatcgccgagtggaaggacgga
ctcaacgaggcctgggcggatctgctggagctcatcgacacgagaacacaaatcctcgca
gcctcttatgaactgcacaaattttaccacgatgccaaggagatcttagggcgtatccaa
gacaaacacaagaaactgcccgaggagctcggtagagaccaaaacacagtggaaacacta
cagagaatgcacacgacgtttgagcacgatatccaggccctgggcacccaggtgcggcag
ctgcaggaggatgcagcgcgcctccaggctgcctacgccggggacaaggctgatgacatc
cagaagagggagaacgaggtcctggaggcgtggaaggcactgctggatgcctgtgagggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgggac
ctcatgctctggatggaagatgttatccggcagatagaagcccaggaaaagccaagggat
gtttcatctgtggaactgctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tatgcatctgaggagatcaaggaaaagctcctgcagctgacagaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctcagactgattttggaggtgcaccagttc
tccagagacgcaagtgtggctgaggcctggctgctgggccaggagccctacctgtcgagc
cgtgagattgggcagagcgtggacgaggtggagaagctgatcaagcggcacgaagcgttt
gagaaatccgcggccacctgggacgagaggtttgcagcgctggagagactgaccacgctg
gagctgctggaggtgcgtcggcagcaagaggaggaggagcggaagaggcagccgcccact
ccggagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaagga
gaacaagtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaaact
gcagaaaccaacgaaatggtgaatggagctgcagaacagaggacgagttccaaagagtcc
agtcccattccttccccgacgtccgaccgcaaagccaagagcggcgttcaggcccagact
gctgcaaccctcccggccaaaacgcaggagatcccctcggcccagatggagggcttccta
caccgcaagcacgagtgggagacacacagcaagaaggcctccagcaggtcatggcataac
gtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcaaaagctgctgct
tctggcattccttaccacaacgagatccccgtcagcttgaaggacgcagtctgcgaagtc
gcggtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaacgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcacatca
gcgatctcttcagacaaaatcgaagtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagtgtcacaataaccagcgagtccagccctggcaagcgg
gagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
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integrated database retrieval system
