Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446165
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Entry
135446165 CDS
T09958
Symbol
PAPOLG
Name
(RefSeq) poly(A) polymerase gamma isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135446165 (PAPOLG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135446165 (PAPOLG)
Enzymes [BR:
zle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
135446165 (PAPOLG)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
135446165 (PAPOLG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
DUF4269
Nrap_D2
LNP1
Polbeta
Motif
Other DBs
NCBI-GeneID:
135446165
NCBI-ProteinID:
XP_064565829
LinkDB
All DBs
Position
3:103996882..104015923
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AA seq
778 aa
AA seq
DB search
MSWCGSGEGWSWAPFDEGPSTSRQQNQPQGHYGLTSPISLAPPSDKDHIHTQKLIEAMKP
FGVFEDQEELYHRTTVLGKLNNFVREWISELAESKNLPPSITEQVGGKIFTFGSYRLGVH
TKGSDIDALCVAPSHVERSDFFQSFFEKLKNQEEVKNLRAIEDAYVPVIKFEFDGIEIDL
VFAKLSLPTVSDDLDLRDDSCLKSLDIRCIRSLNGSRVTDEILRLVPNLENFRLTLRAVK
LWAKRRGVYSNIMGFLGGVSWAMLVARICQLYPNALASTLVNKFFLIFSKWDWPKPVLLK
RLEESFLNLPVWDPRVNPSDRYHVMPIITPAYPQQNSTYNVSVSTRAVMVEEFQRGLEVT
DEILKGKSDWSKLFEPLNFFQKYKHYIVLTASAFTEEHHLNWIGLVESKIRVLVGNLERN
EFITIAHVQPQSFPGNEVLYKQSGFVSMWFLGLVFKKAESAVKTNVDLTHGIQSFTDTVY
RQASALNILKEGMKIEATYVKRKQLHYFLPAGTLQKRKKQRVSDISQNNSGLQCKRSSLG
ESCSDGSKDRGSRTPSNSSSLNKISKLDISTAETERNVACQSCSGANSVAEPSTSKGLCI
PVTDPKMEATVALRTPGPPTGCTIPGYDTVCQLRTCFVQEQHKLSGTLITDPRSASPKQH
YSPSSKVSRPPTAGECPQKAIDGDKLNVWESDFTESGYPQDGRKRATKNGVLDGKSMQIP
VITSRSQRLSSKELPDSSSPVPTNSIRIIKRSIKLTLNGVLRRMFRVLRRAFRKNLGY
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtgcggcagcggtgaagggtggagttgggctcccttcgatgaaggtcccagt
acttccaggcagcagaaccagcctcaagggcactatggacttacctctccaattagcttg
gctcctcccagtgacaaagaccacatccatactcagaagctgattgaagcaatgaagcca
tttggggtgtttgaggatcaggaagaactctatcacaggacaactgttcttggaaaactg
aataactttgtcagagaatggatttcagagcttgctgaaagcaagaatcttcccccttca
ataacagaacaagttggtggcaaaatatttacatttggctcctacagacttggagtacac
accaaaggttcagacatcgatgccctttgtgttgctcccagtcacgtggaaagatcagat
ttttttcagtcattctttgaaaagctgaagaatcaagaggaagtaaaaaacctgagagcc
attgaggatgcatatgtacctgttatcaaatttgagtttgatggcattgagattgacctc
gtgtttgcaaagctctctctgcccacagtctctgatgatctggatctcagggatgactcg
tgcctcaagagcctggatataaggtgcatccggagcctgaatggcagcagggtcacagat
gaaattctgcgcctggtgcccaacctggagaacttccgcctcacgctccgtgcagttaaa
ctgtgggcaaaacgacgtggtgtttactccaacatcatgggatttcttggtggagtctcc
tgggccatgctggtagcaagaatatgtcaactctacccaaatgctttggcctctactctc
gttaacaagttcttcttgattttttcaaaatgggattggccaaagccagtattgctgaaa
cgactggaagagagctttcttaatttaccagtctgggaccccagggtaaacccatcagac
cggtaccacgtgatgcccatcatcaccccagcctacccacagcagaactccacctacaac
gtgtccgtgtccacacgggcagtcatggtggaggagttccagcgtggtcttgaagttaca
gatgagattctcaaaggaaaatcagactggtcaaagctctttgaaccactgaacttcttt
cagaagtacaaacattacattgtgctgactgccagtgcctttacagaagagcatcacctg
aactggattggcctcgtggagtctaaaatccgtgtgctggttggaaacttggaaaggaat
gaatttataactattgcacacgtgcagccacagtctttccctggcaatgaagtcctctat
aaacagagtggatttgtatcaatgtggtttcttgggcttgtgtttaagaaagcagaaagt
gcagtaaagactaacgttgatctaacacatgggatacagtcattcacagacacagtttac
aggcaggccagtgccctcaacatcctaaaggaaggtatgaagattgaggcaacttatgtg
aagagaaagcaactccattattttttgccagcaggaaccttacagaaaagaaagaagcaa
agggtgtcagatattagtcaaaataatagtggacttcagtgcaaaaggtcttctttaggt
gaaagctgttcggatggttccaaagacagaggttccagaacaccctctaattcctcttcg
ttaaataagatatctaagttggacatctctacagcagagacagaaagaaatgttgcatgt
cagagttgtagtggtgccaacagtgtagctgagccatccacgtctaagggactttgcatt
cctgtgactgacccaaaaatggaggctacagttgcactaagaacaccgggacctcccact
ggttgcaccattccaggatatgacacggtttgtcaactcagaacgtgttttgtgcaagag
cagcataaattaagtgggactctaatcacggatcctaggagtgcttcacctaagcagcat
tattcaccaagctctaaagtatctcgtccaccaacagcaggagagtgcccccaaaaagcc
atagatggagacaagctaaacgtgtgggagtcggatttcacagaaagtggataccctcaa
gatgggaggaagagagctacaaaaaatggtgtccttgatggaaaatccatgcagattcca
gtgatcacatcaagatcacagaggctttccagtaaagaactgccagattcttcatctccc
gttccaacaaatagcattcgtatcattaaaagatccatcaaacttacccttaatggggtt
ttaagaagaatgttcagggttttgagaagagcattcaggaagaatttaggttactag
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