KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446174
Entry
135446174         CDS       T09958                                 
Symbol
XPO1
Name
(RefSeq) exportin-1
  KO
K14290  exportin-1
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03008  Ribosome biogenesis in eukaryotes
zle03013  Nucleocytoplasmic transport
zle03250  Viral life cycle - HIV-1
zle05164  Influenza A
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    135446174 (XPO1)
   03008 Ribosome biogenesis in eukaryotes
    135446174 (XPO1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    135446174 (XPO1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    135446174 (XPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zle03019]
    135446174 (XPO1)
   03009 Ribosome biogenesis [BR:zle03009]
    135446174 (XPO1)
   03016 Transfer RNA biogenesis [BR:zle03016]
    135446174 (XPO1)
   03036 Chromosome and associated proteins [BR:zle03036]
    135446174 (XPO1)
Messenger RNA biogenesis [BR:zle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     135446174 (XPO1)
Ribosome biogenesis [BR:zle03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    135446174 (XPO1)
  Pre-60S particles
    135446174 (XPO1)
Transfer RNA biogenesis [BR:zle03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    135446174 (XPO1)
Chromosome and associated proteins [BR:zle03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     135446174 (XPO1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BspA_v Hydrolase_3
Other DBs
NCBI-GeneID: 135446174
NCBI-ProteinID: XP_064565860
LinkDB
Position
3:complement(104295591..104330501)
AA seq 1071 aa
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPACV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGLLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQSVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEETAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKIST
PLNPGSPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagctcgtcagctgctggattttaac
cagaaactggatatcaatctcttggacaatgtggtgaactgcctgtaccatggagaaggt
gcacagcaaagaatggcacaagaagtgttgactcacttaaaagaacatcctgatgcgtgg
acaagagttgatacaattttggagttctctcagaacatgaataccaaatattatggactg
caaatcttggaaaatgtgataaaaacaagatggaagattcttccaaggaaccagtgcgaa
ggtattaaaaaatatgttgttggcctaattatcaagacctcatctgacccagcgtgtgta
gaaaaagagaaagtgtacattgggaagctgaatatgattcttgttcagatcctgaagcag
gagtggcccaagcactggcccacgttcatcagcgacatcgtgggcgccagcaggaccagc
gagagcctctgccagaacaacatggtcatcctcaaactgctcagcgaggaagtctttgac
ttctccagtggccagattactcaagtcaaagccaagcatttgaaagacagcatgtgcaat
gaattctctcagatatttcagctgtgtcagtttgtgatggaaaactcccaaaacgctccc
ttagtccatgcaactttggaaactttgctacgatttctgaactggattcctctgggatat
atatttgagaccaagttaatcagcacactaatatacaagttcttaaatgttcccatgttt
cgaaatgtctccttgaagtgcctcacagagattgcaggtgtcagtgtaagccagtatgaa
gaacagtttgtaacactttttacactgaccatgatgcagttgaaacagatgcttccttta
aataccaacatccgacttgcatactccaatggaaaagatgatgaacagaacttcattcag
aatctcagtttgttcctctgcacgttcctcaaggagcatggtctacttatagagaaaagg
ttaaatctgagggaaacactaatggaggctcttcattacatgttgctggtatcagaagtt
gaagaaactgaaattttcaagatttgtctggaatattggaaccatttagctgctgagctc
tacagggagagcccgttctccacgtcggcgtcgccgctgctctcggggagccagcacttc
gatgtccctccaaggaggcagctctatctgcctgtgctgtccaaggttcgattgctcatg
gtgagccgcatggccaagcctgaggaggtcctggtggtggagaatgaccagggggaggtg
gtgcgggagttcatgaaggacacggattccatcaacttgtataaaaacatgagagaaacc
ttggtttatctcacacatctggactatgcagacacagaaagaattatgactgagaagctc
cacaatcaggtgaatgggacagagtggtcctggaagaacctgaacacgctgtgctgggcc
atcggctccatcagcggcgccatgcacgaggaggatgagaagaggttcctggtcacagtg
atcaaggatctcctgggactctgcgaacaaaagcgagggaaggacaacaaagccattatt
gcatcaaatataatgtatatagtaggtcaatacccacggtttttgagagctcactggaaa
tttttgaagacagtagtcaacaagctgtttgaatttatgcatgaaacccacgatggtgtc
caggacatggcttgtgataccttcataaaaatagcacaaaaatgccgccgacactttgtc
caggttcaggtgggagaggtcatgccatttattgatgaaatcctgaacaatattaacaca
atcatctgtgaccttcagccacaacaggtgcacacgttttacgaagcagttggatacatg
attggggcacagacagaccagagtgtgcaggagcacctgatagaaaagtacatgttgctg
cccaaccaggtgtgggacagcatcattcagcaggcaacaaagaatgttgatattctaaag
gatcctgagacagttaagcagcttggtagcattctgaaaaccaatgtacgagcatgtaaa
gcagttggccacccctttgtgattcagcttggaagaatttatttagatatgctgaatgtg
tacaagtgcctaagtgaaaatatttctgcagctattcaggctaatggtgaaatggtaaca
aagcagcccttgattagaagtatgaggactgtaaaaagggaaactttaaaattaatttct
ggctgggtgagcaggtccaatgatccgcagatggtagctgagaactttgttcctccgttg
ttggatgcagttctcatcgattaccagcggaacgtgccggcggcgcgcgagcccgaggtg
ctcagcaccatggccatcatcgtcaacaagctggggggacacatcactgctgaaatacct
cagatcttcgatgctgtctttgagtgcacattaaacatgatcaacaaggactttgaagaa
tatcctgaacatagaacaaacttcttcttgctacttcaagctgtaaattctcactgcttc
ccagccttcctggccattccacctgcacagttcaaacttgtcctggattctattatttgg
gctttcaaacacacaatgagaaacgttgcagatacaggcctgcagatcctgtacaccctg
ctgcagaacgtggcgcaggaggagacggctgcccagagcttctaccagacctatttctgt
gacatcctgcagcacatcttctccgtggtcacagacacctcccacactgcaggtttgaca
atgcacgcctcaatcctcgcctacatgttcaacttggtggaagagggaaagatcagtact
cctttaaaccctggcagcccagtgaacaaccaaatgtttattcaggagtatgtggctaat
ctcctcaaatctgcatttcctcacctgcaagatgcccaggtgaagctgttcgtaacaggg
ctcttcagtttaaaccaggatattcctgccttcaaggaacacctaagggatttcctggtc
caaatcaaggaatttgcaggtgaagacacatcagacttgttcttggaggagagagaaaca
gcccttcggcaggctcaagaggagaagcataaacttcagatgtctgtacctggcatcctt
aatccacatgaaattcccgaggagatgtgcgattaa

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