Zonotrichia leucophrys gambelii (white-crowned sparrow): 135446216
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Entry
135446216 CDS
T09958
Symbol
TDRD6
Name
(RefSeq) tudor domain-containing protein 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135446216 (TDRD6)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135446216 (TDRD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
DUF4537
SGF29_Tudor
Tudor_krimper_1st
Motif
Other DBs
NCBI-GeneID:
135446216
NCBI-ProteinID:
XP_064565955
LinkDB
All DBs
Position
3:complement(107654885..107665501)
Genome browser
AA seq
2312 aa
AA seq
DB search
MSSGPGSLGRGDTVTLRVRAVGLYPEVPILRLWGLLGESKADYALLYREIQAAAGPRLAA
CPEPGGPGASGTRLCPGDMALVEVLGVWYRCCVVSCSAQGYRVFLLDEGYVVTTSAYYLA
RGCSELFQLPPEVLGCVVAEVMPCHSNEGTASGDSPVSKWTVEAMEFLSFLQGKEVSGVV
QEVIMPQVIVLELPQLVAQMQQLGLAKRVSPSWFCQVLRRCLPSGQLKKQLCQQPPACSL
GAFAVPQLVHVLLSYQPLSPALDYYYPQLQLDVTEPVLVTHVSDPHHIYCQLQCLSQEIC
CLSETMCHAYDRWEQDLLPKVGSPCAARGMDGQWYRAILLELIAGEQDQHAALVIFVDYG
KKETVSRANLRHLPAECFRMPVVTYACALQGVSDGGCGWSSLQVDLLKALVLGRGVSAHI
KAFNSFEHLYYVTLYGENGVDLNHLFGSQACCLASSHVSQTEDHEQLEVEESLVEELGLP
PEAPPVSAHGDLAAAAGVYLKTWTLYSAQVSHLQDPSEFWLQLHEYYQLFRQLRQSMWNF
YSHSTKLDGAGWDPQPGSLCCASGNEGVFYRAVVTRVLDTGVEIHLVDRGSTETVDLCAV
KELLPRFRELPALALKCCLAGVSPPRGSWSEAAVSAFREMVLNKELKVWFLNVQGDKYMV
EIFDQSQLGEGRVSKLMAQGGYAKYQRYEIPRTCKKSDESVTQASPLVCAAEESQVNAEK
RLREECNLKSNDRIFDSHVGVVVRESPIAAFHNSKNSESLLSRDYEGKENLHTSLRQNYV
EIKPGSSCGGHLEVGSTVHVILSYVESPSCFWCQLSRNCQDLEILMDEIQEHCKNSSKPH
VWPNLVCLAQYSEDKKWYRALIVSEGVCAEKVEVIYVDYGNREQVCLTKLRAINERFLRL
EAQAFRCSLYNLIQPNGQNPFAWDEEAIRAFRQFVVDSSSDLDLKCTIFALASINRDLFN
IVDLITPFQSACQFLTERGVARPLFPQKHLESLVQLHSFYYSSHGIKIGSEEDVYVTHVE
NPWTFYCQLERCGDTLAQLADNIASLSERVASSGSLGKSGTLCLARYSDSQWYRGVIMER
QPKAKVFFVDFGNTETIETDDLLILPNDASDILLVPMQAIKCSVSDVSSVSKEAATWFKE
AVLEKRLKAIVVAKDSDNTLLVELFDRNTQINTKLKELSLNSTGLRGRIHNETLCTGNTN
VPERNETAGSPFSAGRPLERRKCRPEAQQEPGSRRHFKEVVNLFQHSVKGHVAAGLLEPN
EVLSSKNNPVLLNKVGEESLLFSQMDTLSDTKSDAEGRCIMLKNASDLPPQKIVPALKTL
VYVSYVSDPQDFYVQLGSDEVQLNNILESLNNGKSVKDPYGQLFQVGDLISAVYSEDSLW
YRAVVKEKTSDNSIRVHYIDYGDTSVISVDQARRLPKNLSSIPAMSIHCFLGGLKCKKNA
GWTEKAVFYFTKRTSEILLSCEFVKKVEDKWEVILSDHQGIITVDLADKDLASRERLFSR
RKIDRRENHDMITSCEPLPPQVQNETSCVSDCKSFIWKFPEAGETLKIYVTVVNSPGYFW
CHRADTKDVSYIEKKIEEAEKLGLSSLNDGKCCIKSGDICLAKYSQDGWFYRAQISSVSD
DSVVVRHVDYGSEENVRLEMIRQMPCELLRVPGQAFACCLSGFSPPDGSWLSEANKKFYD
MTENLVLEAEVVEIWENKDSEVPLCVVKLEASGNSINEEMKPFWKANKETDDSDFSNLCN
PLKENRSSDSNLGLCLNKETTAPCGLAQEESQSALFCSDPFLGVTSECLETAEANVSVGA
ASGKADGGCEIGECENSIDKERPLSEGVSDNTVLLEPMRNCSAHIVGNGMRAEEQDLSEI
LFGEEAELKAEVAGSAPAASLFLGEEQELQRLPVLQAQPSASNGAETLGQRDPLEMHLPC
DDLKELLQGLEGVMEKSSCGEGTKEALEAKSLEMQAASGSETRETVLKQELLVLPNVREE
TGQLTAQNCLEILPLLNEKENLVPPVSDREKSVELIPSDVQLSLGEETKKLQVNLSGIHE
AEAMLDDWMEADPPSLRLSSSGGRPEKELPQKMHDKQLMLGAKFEPFLELVLPNVQPPEE
DREEDLLGLEHAMLQSSAGSGSQFSFLSKDSANQRPVFSVKSCDCKVEKHKGWQKKKGDS
VEEWMEQDLTDSFKESENMCVQSLGCKPGEDKKQNENLADCSAAHHDYPCNLKGFAVGSK
CVVWTSLKWCDARILEVSEKGTKVLNLCSGNEEIVHPENVWNGIPDGARRSSEALTPATE
NLQPLPEESLLQEKQTGCSSNLAEDAHVLQQC
NT seq
6939 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgggccggggtccctcggccgcggtgataccgtcactctgcgggtccgcgcc
gtggggctgtaccccgaggtgcccatcctgcggctgtgggggcttctgggggaaagcaag
gctgactatgctctcctgtaccgcgagatccaggcggcggccgggccgcgcctggcggcc
tgcccagagcccggcgggccgggcgccagcgggaccaggctgtgcccaggagacatggcg
ctggtggaagtgttgggtgtgtggtaccgctgctgtgtggtgagttgtagtgcccagggg
taccgtgttttcctgctggacgaggggtacgtggtgaccacgtctgcctattacttggcc
cggggctgctcagagctgttccagctgcccccggaggtgctgggctgtgtcgtggccgaa
gtcatgccctgccacagtaacgagggtacagcaagtggggattcacctgtgtccaagtgg
accgtggaggcgatggagttcctcagcttcctgcaaggcaaggaggtgtctggtgtggtg
caggaggtgataatgccgcaggtcatcgtgcttgagctgccccagctcgtggctcagatg
cagcagctgggcctggccaaacgagtctctcccagctggttctgccaggtgctcaggcgc
tgcctgccctctggccagttaaagaagcagctctgtcagcagcctccagcgtgttccctc
ggagcttttgcagttccacagcttgtccatgtgttgctctcataccagcctctgtcacct
gccttggattactactaccctcagcttcagttggatgtgacagagcctgtcctagtgacc
catgtctcggacccacaccacatttactgccagttgcagtgcctgtcacaggagatctgt
tgcctttctgagactatgtgccatgcttatgaccggtgggagcaggacttactgcccaaa
gtgggctcgccctgtgctgcccgtgggatggatggccagtggtaccgtgccattctgctg
gagctcattgctggggagcaggaccagcatgcagctctcgtgatctttgtggactatggc
aagaaggagactgtgagcagagcgaacctgcgccatttgcctgccgagtgtttccgcatg
cctgtggtcacttacgcgtgtgctcttcagggtgtttcagatgggggctgtggctggtcc
tcgctgcaggttgatttgctgaaagcgctggtgctcggcagaggagtgagtgctcacatc
aaagcctttaactcctttgagcatctctattatgtgactctctatggggaaaatggtgtt
gatttgaaccatctttttgggtctcaggcttgctgcctggccagcagtcatgtgagccaa
actgaggatcatgagcagttggaagtagaggaatccttagttgaagagttgggattgcca
ccagaagcacctcctgtttcagcccatggagatttggctgctgctgctggtgtgtatctg
aagacctggacattgtacagtgcacaggtctcccacctccaagacccatctgagttctgg
ctgcagctccatgagtattaccagctcttcaggcagctgaggcagagcatgtggaatttt
tattcccattccacaaagctggatggtgctgggtgggacccacagcctggatccctttgt
tgtgccagtgggaacgagggtgtcttttatcgagcagtggttaccagggtgctggacact
ggggtggaaatacacctggtggacagaggcagtacagaaactgtggatctgtgtgctgtg
aaggagctgctccctcggttcagggaactgcctgctttagctctgaagtgttgtttggca
ggtgtctcccctccaagagggagttggagtgaagctgctgtgtctgcattcagggagatg
gtactgaacaaggaactaaaggtttggtttttgaatgtgcagggtgacaaatacatggtt
gaaatttttgaccagtctcagttaggagagggaagagtaagtaaactcatggcccagggg
ggttatgctaagtaccagaggtatgaaatacccaggacttgcaagaaatcagatgagtct
gtgacacaggcctctcccctagtgtgtgctgcagaggaaagccaagtaaacgcagagaag
aggctcagagaagaatgcaatctaaagagcaatgatagaatatttgattctcacgtgggt
gtggtggtcagagagagtcctattgcagcctttcataattctaaaaatagtgaatctctt
ctttctcgagactatgagggtaaggaaaatctgcacacctctttgaggcagaactatgtg
gaaattaagccaggctcctcttgtggaggccacttagaagtgggaagtacagttcatgtt
attttgtcatatgttgagagtcccagttgtttctggtgtcaattaagtagaaattgccag
gaccttgagatactaatggatgaaattcaagagcattgcaagaattcatccaagccacat
gtttggccaaatcttgtctgtttagcccagtactcagaggacaagaaatggtacagggct
ttaatagttagtgaaggagtttgtgcagagaaagtagaagtcatctatgttgactatggc
aacagagagcaggtgtgtctaacgaagctccgtgcaattaatgaacgcttccttaggtta
gaggctcaggcattcaggtgcagcctttacaacttaatccaacccaatggtcagaatcct
tttgcttgggatgaagaagcaattcgggcttttcgtcagtttgttgttgattcatcatct
gaccttgacctaaagtgtacaatctttgccttggcgtcaataaatagggacctgtttaac
attgtagatttaatcacaccttttcagagtgcttgccagtttctcactgagagaggtgta
gccagacctttgtttcctcaaaagcatctggaatccttggtccagcttcactctttctat
tattctagtcacggcatcaaaattgggagtgaggaagatgtttatgttacacatgttgag
aatccatggacattttactgccagcttgaaaggtgtggagatactttggcacagctggct
gataacattgcttccctgagtgagagagtggccagctcaggatccttggggaagtctggg
accttgtgtctggcaaggtactctgacagtcagtggtataggggagtaattatggaaaga
cagcctaaggctaaagtcttctttgtggattttgggaacacagagacaatagagacagac
gatctgcttattttgcccaatgatgcttctgatatcttgcttgtgccaatgcaggccata
aagtgttctgtgtctgatgtatcatctgtttccaaggaagctgccacatggtttaaggaa
gctgtcctggaaaagagattaaaagcaatagtggtagcaaaggactctgataatacactg
ctggttgagttgtttgatagaaatactcaaattaatacaaaactgaaagagctgagccta
aacagtacaggactgcgtggtcgtatacacaatgagactttgtgcactggaaatacaaat
gtgcctgagaggaatgagactgcagggtcccctttcagtgcaggcaggcctcttgaaaga
agaaaatgtcgacctgaagcccagcaagagccagggagcagaagacacttcaaagaagtt
gtaaaccttttccagcactctgtgaagggtcatgtggcagctggattgctggaacctaat
gaggtgcttagcagtaagaacaatccagtcttgttgaataaagtaggggaggagtctctg
ctcttttcccagatggatacactgtcagatactaagtctgatgctgaaggcaggtgtata
atgcttaaaaatgcatctgatctgcctccacagaagatagtgccagctcttaaaacctta
gtgtatgtgtcttatgtcagtgacccgcaggatttttatgttcaactagggagtgatgaa
gttcagcttaacaacattttggaaagtttaaacaatgggaaatcagtgaaagacccttat
ggacagcttttccaagtaggagatttaatcagtgctgtttattcagaagacagcctgtgg
tatcgagctgtagtaaaagagaagacttctgacaattcgataagggtgcattatattgat
tatggtgacacttctgtgatcagtgttgatcaagcacgcaggctccctaagaacttgtca
tctattccagcaatgagcattcactgctttctaggtggacttaaatgcaaaaaaaatgct
ggctggacagagaaagcagtgttttacttcaccaagagaacaagtgaaatcctgctgtcg
tgtgaatttgtaaagaaggttgaggataaatgggaagttattctcagtgaccatcaaggt
atcataacagtggatttagctgataaagatcttgcaagtagagaaagacttttctcaaga
aggaaaattgatagaagagagaaccatgacatgatcactagctgtgagcctttgcctcct
caggtgcaaaatgagacttcctgtgtgagtgattgtaaatcatttatctggaaatttcca
gaggcaggtgagactttaaagatttacgtcacagtagtaaatagtccaggatacttctgg
tgccaccgtgctgataccaaagacgtgagctacatcgagaaaaaaatagaggaagctgaa
aagcttggactaagctctctgaatgatggcaagtgttgtattaaaagtggagatatttgt
ctggcaaagtacagtcaggatgggtggttctacagagctcagatcagcagtgtgagtgat
gacagtgtcgttgtcagacacgtggattatggaagcgaggaaaacgtcaggctggagatg
atccgacagatgccatgtgaactgctcagagtacctgggcaagcttttgcgtgctgtctc
tcaggtttcagtcccccagatggctcatggcttagtgaagcaaataagaagttttatgat
atgactgaaaaccttgtattagaagctgaagttgtagaaatttgggaaaataaagattct
gaagtccctctgtgtgttgtcaagctggaagcttctggcaatagtattaatgaagagatg
aagccattttggaaggctaacaaagaaactgatgacagtgatttctcaaacctttgcaac
cccctaaaggaaaacagaagttcagacagcaatttgggtctttgtctcaacaaagaaact
actgctccttgtggattagctcaggaagaaagtcaaagtgctttattttgttctgatcct
ttcctgggtgtaacttctgaatgcttagaaactgcagaagcaaacgtgtcagtgggagct
gccagtgggaaggctgatggtggatgtgaaataggagagtgtgagaacagtattgataaa
gagagacctctgtctgaaggtgtcagtgataacactgtgctgctagaaccaatgagaaac
tgcagcgctcatattgtgggcaatggaatgagagctgaagagcaagacctgtctgaaata
ctgtttggagaggaggctgagctgaaagcagaagtggcaggcagtgctccagcagccagc
cttttcctaggagaagaacaggaactgcagagattgccagtgctccaggcacagccatct
gcaagcaatggagcagagacattaggacaacgggatccattagaaatgcacttaccatgt
gatgatctaaaagagctcctacaggggcttgagggagttatggaaaagtcctcatgtggt
gagggaacaaaggaagcactggaagcgaagtctctggaaatgcaggcagcatcaggcagt
gaaacaagagagacagtgttgaagcaggaattgctggtgctgccaaatgtgagggaggag
acagggcagttgacagctcagaactgtcttgaaattttgccattacttaatgagaaagaa
aatctggtgcctccagttagtgacagagagaagtcagtagagctgattccatctgatgtt
cagctttctttgggagaggagacgaagaaactgcaagtgaatttgtctggaattcatgaa
gcagaagctatgctagatgattggatggaagcagaccctccttccctaaggctgtcatca
tctggtggtagacctgagaaagagctgcctcagaagatgcatgacaagcaattgatgcta
ggagccaaatttgagccctttctggaactggtgctgcccaatgttcagcctcctgaggaa
gacagggaggaagatttgttagggctggaacatgctatgctacagagttctgcaggtagt
ggaagtcagttttcatttctttcaaaagactcagcaaatcaaaggcctgttttctctgtg
aaatcatgtgactgtaaagttgagaaacataaggggtggcagaagaagaaaggtgactct
gtggaagaatggatggaacaagacttgaccgactcatttaaagagagtgaaaatatgtgt
gttcagtctttaggctgtaagcctggggaagacaaaaagcaaaatgagaacttggctgac
tgcagtgcagcacaccatgactatccatgtaatctgaagggctttgctgttggttccaaa
tgtgtggtgtggacttctctcaaatggtgtgatgctcgcattttggaggtatctgagaag
ggtactaaggttttgaacctctgcagtggcaatgaggagattgtgcatcctgagaacgtc
tggaacgggattcctgacggggctcgtagatcatctgaggcattaacccctgcaacagaa
aacttgcagcccttaccagaggagtccttacttcaagaaaagcaaactggctgcagtagc
aatttagctgaagatgctcatgtcctccagcagtgctga
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integrated database retrieval system
